New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 228721 =NA (NA)70 (0.500) 14/166 NT NA intergenic (+59/‑35) rrlH/rrfH 23S ribosomal RNA of rrnH operon/5S ribosomal RNA of rrnH operon
?NC_000913 228745 = NA (NA)intergenic (+83/‑11) rrlH/rrfH 23S ribosomal RNA of rrnH operon/5S ribosomal RNA of rrnH operon

Only 100 of 122 total aligned reads displayed.

GTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACC  >  NC_000913/228622‑228786
                                                                                                    |                                                                 
gTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTaaa                                                                   >  1:63947/1‑100 (MQ=33)
gTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTaaa                                                                   >  1:2592620/1‑100 (MQ=33)
  tGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATc                                                                 <  1:3972825/100‑1 (MQ=32)
  tGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATc                                                                 <  2:3221670/100‑1 (MQ=32)
   gAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCa                                                                <  1:3504358/100‑1 (MQ=33)
   gAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCa                                                                >  1:1352471/1‑100 (MQ=33)
    aGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAg                                                               <  2:261986/100‑1 (MQ=33)
     gCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGa                                                              >  2:3502033/1‑100 (MQ=32)
     gCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGa                                                              >  2:4180860/1‑100 (MQ=33)
        aaCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACg                                                           >  2:4082169/1‑100 (MQ=33)
         aCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGc                                                          <  1:2502045/100‑1 (MQ=33)
         aCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGc                                                          >  1:3155298/1‑100 (MQ=33)
         aCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGc                                                          >  1:2517162/1‑100 (MQ=33)
         aCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGc                                                          >  1:2026554/1‑100 (MQ=33)
           cGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAg                                                        >  2:373375/1‑100 (MQ=33)
           cGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAg                                                        <  2:2816399/100‑1 (MQ=33)
             gTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGaa                                                      <  1:222974/100‑1 (MQ=33)
               aCTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc                                                    >  1:871464/1‑100 (MQ=33)
               aCTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGc                                                    >  2:3219758/1‑100 (MQ=32)
                cTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCg                                                   >  2:1203166/1‑100 (MQ=33)
                cTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCg                                                   >  1:733095/1‑100 (MQ=33)
                cTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCg                                                   >  1:3495245/1‑100 (MQ=33)
                 tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCgg                                                  <  1:3758071/100‑1 (MQ=33)
                 tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCgg                                                  >  2:156004/1‑100 (MQ=32)
                  aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGt                                                 >  1:1928428/1‑100 (MQ=33)
                  aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGt                                                 >  2:824948/1‑100 (MQ=32)
                   aTGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTc                                                >  2:3822867/1‑100 (MQ=33)
                    tGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCt                                               <  1:3682855/100‑1 (MQ=33)
                    tGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCt                                               >  1:3678817/1‑100 (MQ=33)
                    tGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATAAAGATTAAATAAGAACGCAGAAGCg                                                   >  2:797775/1‑96 (MQ=16)
                     gAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTg                                              >  1:3068797/1‑100 (MQ=32)
                     gAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTg                                              >  2:1972460/1‑100 (MQ=33)
                      aaCCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGa                                             <  2:3710580/100‑1 (MQ=33)
                      aaCCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGa                                             <  1:1465489/100‑1 (MQ=32)
                      aaCCGTGAGACTTAACCCTACAACCCCGAAGCTG‑TTTTGTCGGATTGATAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCt                                               <  1:3782158/98‑1 (MQ=11)
                        ccGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATa                                           <  1:340686/100‑1 (MQ=33)
                        ccGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATa                                           >  2:2729313/1‑100 (MQ=33)
                        ccGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATa                                           >  1:2913784/1‑100 (MQ=33)
                        ccGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATa                                           >  1:1780666/1‑100 (MQ=33)
                        ccGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATa                                           <  2:1003142/100‑1 (MQ=33)
                         cGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATaa                                          >  2:2134923/1‑100 (MQ=33)
                          gTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATaaa                                         >  2:1729982/1‑100 (MQ=33)
                           tGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATaaaa                                        <  1:1142143/100‑1 (MQ=32)
                           tGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGAGGTCTGATaa                                          >  2:1104002/1‑98 (MQ=17)
                            gAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAAc                                       <  1:456634/100‑1 (MQ=33)
                              ggCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAg                                     >  2:2614573/1‑100 (MQ=33)
                               gCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTTATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGa                                    <  2:132438/100‑1 (MQ=17)
                               gCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGa                                    >  2:2422445/1‑100 (MQ=33)
                               gCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGa                                    >  1:2266770/1‑100 (MQ=33)
                                  tAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAAtt                                 >  2:2741004/1‑100 (MQ=33)
                                    aCCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTg                               <  1:212196/100‑1 (MQ=33)
                                     ccTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGc                              >  2:2483091/1‑100 (MQ=33)
                                      cTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGcc                             <  1:4180889/100‑1 (MQ=33)
                                        tACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTg                           <  1:2715049/100‑1 (MQ=33)
                                        tACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTg                           <  1:2492514/100‑1 (MQ=32)
                                        tACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTg                           <  1:1949386/100‑1 (MQ=33)
                                         aCAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTgg                          >  2:2730252/1‑100 (MQ=33)
                                          cAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggc                         >  1:1130002/1‑100 (MQ=32)
                                          cAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggc                         >  2:2861834/1‑100 (MQ=33)
                                          cAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggc                         >  1:1654379/1‑100 (MQ=33)
                                          cAACGACGAAGCTG‑TTTTGGCGGAATCAGACAAGACTTTCAACCTGATACAGATTAAATTAGAAACCAGACGCAGTCTGATAATACATAATTTGCCTg                           >  2:288602/1‑98 (MQ=2)
                                            aCGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggcgg                       >  1:3234307/1‑100 (MQ=33)
                                             tggcGAGGCTGTTTTTGGCGGATTGAGAGGAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggcgg                       >  2:610067/4‑100 (MQ=1)
                                             cGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggcggc                      <  2:1573408/100‑1 (MQ=33)
                                             cGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggcggc                      <  1:1414014/100‑1 (MQ=32)
                                              gCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGcc                     <  1:2186881/100‑1 (MQ=35)
                                               ccGAAGCTG‑TTTTGGCGGATTGAGCGAAGAGTGTCAGCCTGATACAGATTAAATGAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCg                    <  1:748370/100‑1 (MQ=11)
                                               ccGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCg                    >  2:2261459/1‑100 (MQ=35)
                                                cGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGt                   <  2:3140968/100‑1 (MQ=35)
                                                 gAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTa                  <  1:403918/100‑1 (MQ=35)
                                                  aaGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAg                 <  1:2730259/100‑1 (MQ=35)
                                                   aGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAgc                <  1:81652/100‑1 (MQ=35)
                                                    gCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAgcg               >  1:2291288/1‑100 (MQ=35)
                                                    gCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAgcg               <  2:129328/100‑1 (MQ=35)
                                                       g‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATCAAACAGAATTTGCCTGGCGGCCGTAGCGCgg            >  2:2041884/1‑100 (MQ=18)
                                                       g‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCgg            >  2:2349802/1‑100 (MQ=33)
                                                       g‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCgg            >  2:1839462/1‑100 (MQ=33)
                                                       g‑TTTTGGCGGATTGAGAGAAGAGTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCgg            <  2:1991147/100‑1 (MQ=17)
                                                          nttGGCGGATTGAGAGAAGATTTTCAGCCTGATACTGATTAACTCAGAAGGCAGAAGCGGTCTGATCAAACAGAATTTGCCTGGCGGCCGTAGCGCgg            >  2:4122553/2‑98 (MQ=11)
                                                           ttGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCggtgg         >  2:947823/1‑100 (MQ=32)
                                                            tGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCggtggt        >  2:572414/1‑100 (MQ=33)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGACTTTGCCTGGCGGCCGTAGCGCGGTGGTc       <  2:3071188/100‑1 (MQ=18)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc       >  2:663123/1‑100 (MQ=33)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc       >  1:50761/1‑100 (MQ=33)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc       <  1:1566450/100‑1 (MQ=33)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc       <  1:3406110/100‑1 (MQ=33)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc       <  1:3401135/100‑1 (MQ=33)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc       >  2:3706259/1‑100 (MQ=32)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc       >  1:32736/1‑100 (MQ=32)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc       >  1:2811867/1‑100 (MQ=33)
                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc       >  1:240339/1‑100 (MQ=33)
                                                              gCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTcc      >  2:1462379/1‑100 (MQ=33)
                                                               cGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTccc     <  1:2003385/100‑1 (MQ=33)
                                                                ggATGGGGAGAAGATTGTAGGCCTGATACAGATTAGAGCAGAACGCAGAAGCGGTCTGATAGACCAGGATTTGCCTAGTGGTCGTAGCGCggtgagcgc     <  2:2049132/99‑6 (MQ=2)
                                                                 gATTGAGAGAAGATTTTCAGCCTGATACCGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAACTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc   <  1:1237866/100‑1 (MQ=12)
                                                                 gATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc   <  1:3884618/100‑1 (MQ=32)
                                                                  aTTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAcc  <  2:1928425/100‑1 (MQ=31)
                                                                  aTTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAcc  <  2:2881722/100‑1 (MQ=31)
                                                                  aTTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAcc  <  1:1331467/100‑1 (MQ=31)
                                                                  aTTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAcc  <  2:2412537/100‑1 (MQ=31)
                                                                                                    |                                                                 
GTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTG‑TTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACC  >  NC_000913/228622‑228786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.