| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 526501 | NA (NA) | 6 (0.040) | 4/170 | NT | 100% | coding (3241/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 526526 | 0 (0.000) | coding (3266/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
TCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCT > NC_000913/526424‑526598 | tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC < 2:656023‑M2/100‑1 (MQ=255)tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC > 1:1836347‑M2/1‑100 (MQ=255)tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC > 2:2101013‑M2/1‑100 (MQ=255)tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC < 1:2080767‑M2/100‑1 (MQ=255)tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC < 1:2340597‑M2/100‑1 (MQ=255)tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC > 1:980590‑M2/1‑100 (MQ=255)tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC > 1:3117654‑M2/1‑100 (MQ=255)tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC < 1:3186911‑M2/100‑1 (MQ=255)tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC < 1:3787360‑M2/100‑1 (MQ=255)tCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGAC < 1:4142573‑M2/100‑1 (MQ=255) ccAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACG < 1:1201792‑M2/100‑1 (MQ=255) ccAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACG < 2:3161489‑M2/100‑1 (MQ=255) ccAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACG < 2:1575362‑M2/100‑1 (MQ=255) ccAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACG < 1:673354‑M2/100‑1 (MQ=255) ccAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACG < 1:3076250‑M2/100‑1 (MQ=255) ccAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACG > 1:1584247‑M2/1‑100 (MQ=255) ccAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACG > 1:1138866‑M2/1‑100 (MQ=255) ccAGACGGTATACGAGCCGGGAAGCTTCACGCCGCCCATCCGGGTCGAGACAGAGACCGGCGAGCGGGAAAGGGCGCAGCGGCGCAGCCTGGCAGGGACG < 2:2919089‑M2/100‑1 (MQ=255) aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT < 2:1694316‑M2/100‑1 (MQ=255) aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT < 1:1912482‑M2/100‑1 (MQ=255) aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT < 2:2104304‑M2/100‑1 (MQ=255) aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT > 2:4060203‑M2/1‑100 (MQ=255) aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT > 2:4061826‑M2/1‑100 (MQ=255) ggAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctc < 1:421219‑M2/100‑65 (MQ=255) ggAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTgcgctttctcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctc < 2:505680‑M2/100‑65 (MQ=255) aGCGCAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtatac < 1:431488‑M2/100‑71 (MQ=255) gcgcAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtatacc < 1:509032‑M2/100‑72 (MQ=255) cgcAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccg < 1:377958‑M2/100‑73 (MQ=255) cgcAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccg < 1:2810828‑M2/100‑73 (MQ=255) | TCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCT > NC_000913/526424‑526598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |