| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 526501 | NA (NA) | 6 (0.040) | 4/170 | NT | 100% | coding (3241/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 526526 | 0 (0.000) | coding (3266/4281 nt) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
AGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGT > NC_000913/526427‑526625 | aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT > 2:4061826‑M2/1‑100 (MQ=255)aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT < 1:1912482‑M2/100‑1 (MQ=255)aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT > 2:4060203‑M2/1‑100 (MQ=255)aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT < 2:2104304‑M2/100‑1 (MQ=255)aGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCT < 2:1694316‑M2/100‑1 (MQ=255) ggAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctc < 1:421219‑M2/100‑65 (MQ=255) ggAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTgcgctttctcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctc < 2:505680‑M2/100‑65 (MQ=255) aGCGCAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtatac < 1:431488‑M2/100‑71 (MQ=255) gcgcAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtatacc < 1:509032‑M2/100‑72 (MQ=255) cgcAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccg < 1:377958‑M2/100‑73 (MQ=255) cgcAGCGGCGCAGCCTGGCAGAGACGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccg < 1:2810828‑M2/100‑73 (MQ=255) cGCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccgtctggatacgtgtggtgtcagtct < 2:1539256‑M2/100‑97 (MQ=255) gCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccgtctggatacgtgtggtgtcagtctg > 1:4060230‑M2/1‑3 (MQ=255) gCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccgtctggatacgtgtggtgtcagtctg > 1:4061853‑M2/1‑3 (MQ=255) gCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccgtctggatacgtgtggtgtcagtctg > 1:240230‑M2/1‑3 (MQ=255) gCTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccgtctggatacgtgtggtgtcagtctg < 1:1491381‑M2/100‑98 (MQ=255) cTgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccgtctggatacgtgtggtgtcagtctgc < 1:1775905‑M2/100‑99 (MQ=255) cTgcgctttttcccgctcgccgttctctgtctcgaaccggatgagcggcgtgcagcttcccggctcctctaccgtatggatacgtgtggtgtcagtctac < 2:1221655‑M2/100‑99 (MQ=255) tgcgctttttcccgctcgccgttctctgtctcgacccggatgagtggcgtgaagcttcccggctcgtataccgtctggatacgtgtggtgtcagtctgc > 2:3992259‑M2/1‑1 (MQ=255) tgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccgtctggatacgtgtggtgtcagtctgca < 1:3970421‑M2/100‑100 (MQ=255) tgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccgtctggatacgtgtggtgtcagtctgca > 1:1099843‑M2/1‑1 (MQ=255) tgcgctttttcccgctcgccgttctctgtctcgacccggatgagcggcgtgaagcttcccggctcgtataccgtcgggatacgtgtggtgtctg < 2:1013316‑M2/94‑94 (MQ=255) | AGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGT > NC_000913/526427‑526625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |