New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)116 (0.820) 76/170 NT 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 142 total aligned reads displayed.

CCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG  >  NC_000913/1299400‑1299597
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ccATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAa                                                                                                    <  2:2907104‑M1/100‑2 (MQ=255)
 catcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAat                                                                                                   >  1:1790084‑M1/1‑98 (MQ=255)
   tcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataa                                                                                                 >  1:2659726‑M1/1‑96 (MQ=255)
   tcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataa                                                                                                 >  2:709842‑M1/1‑96 (MQ=255)
    catGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataan                                                                                                <  1:1909553‑M1/100‑6 (MQ=255)
      tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAAataata                                                                                               >  1:1037386‑M1/1‑94 (MQ=255)
      tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataa                                                                                              >  2:227619‑M1/1‑93 (MQ=255)
      tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataa                                                                                              >  2:2877438‑M1/1‑93 (MQ=255)
       gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataat                                                                                             >  1:1377532‑M1/1‑92 (MQ=255)
       gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataat                                                                                             >  1:1265255‑M1/1‑92 (MQ=255)
        ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatc                                                                                            <  2:330607‑M1/100‑10 (MQ=255)
         tATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatca                                                                                           <  2:236659‑M1/100‑11 (MQ=255)
         tATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatca                                                                                           <  1:733596‑M1/100‑11 (MQ=255)
          aTTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaa                                                                                          >  2:1274852‑M1/1‑89 (MQ=255)
            tttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaatt                                                                                        >  1:1553881‑M1/1‑87 (MQ=255)
               cGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgtt                                                                                     >  1:989948‑M1/1‑84 (MQ=255)
                  cacaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaa                                                                                  >  2:2081060‑M1/1‑81 (MQ=255)
                  cacaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaa                                                                                  >  2:2080449‑M1/1‑81 (MQ=255)
                   acaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaat                                                                                 <  2:1650252‑M1/100‑21 (MQ=255)
                    catcatAATCCTGTGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaat                                                                                 <  2:2494654‑M1/99‑21 (MQ=255)
                    catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaatt                                                                                <  1:3717819‑M1/100‑22 (MQ=255)
                    catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaatt                                                                                >  1:3842811‑M1/1‑79 (MQ=255)
                      tcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattat                                                                              >  2:1664722‑M1/1‑77 (MQ=255)
                           aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgc                                                                         <  2:2787594‑M1/100‑29 (MQ=255)
                            ttcttgtcttgctgaAGAATAATTAAAATGATATTATTAATTCCACTGTCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtg                                                                          <  2:2618716‑M1/91‑28 (MQ=255)
                            tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgca                                                                        <  2:451890‑M1/100‑30 (MQ=255)
                            tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgca                                                                        <  1:3554816‑M1/100‑30 (MQ=255)
                            tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgc                                                                         <  2:4138049‑M1/99‑29 (MQ=255)
                              cTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatt                                                                      >  2:80944‑M1/1‑69 (MQ=255)
                                gggCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttc                                                                    >  2:62577‑M1/1‑67 (MQ=255)
                                  gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcac                                                                  <  1:2310328‑M1/100‑36 (MQ=255)
                                  gCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcac                                                                  >  2:2691700‑M1/1‑65 (MQ=255)
                                  gCTTGCTGAAGAATAATTGAAAAGATATTATTAATTCCACTGCCTTTGGTAGATGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcac                                                                  <  2:3963230‑M1/100‑36 (MQ=255)
                                      gCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactact                                                              >  1:4148767‑M1/1‑61 (MQ=255)
                                        tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactgg                                                            >  1:923889‑M1/1‑59 (MQ=255)
                                         gaagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactgga                                                           <  1:3267892‑M1/100‑43 (MQ=255)
                                           agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaac                                                         <  2:362224‑M1/100‑45 (MQ=255)
                                           agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaac                                                         <  1:2218646‑M1/100‑45 (MQ=255)
                                            gaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaact                                                        >  1:1718426‑M1/1‑55 (MQ=255)
                                             aataatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactg                                                       <  2:3440825‑M1/100‑47 (MQ=255)
                                             aataatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactg                                                       <  2:3440752‑M1/100‑47 (MQ=255)
                                               taatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgta                                                     <  2:4136833‑M1/100‑49 (MQ=255)
                                                aatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcacaactggaactgtaa                                                    >  2:3959283‑M1/1‑51 (MQ=255)
                                                 atTGAAATGATATTATTAATTCCACTGCCTTTGGTATAGTAAAGTGCT‑AAataataatcaattgttaaataattgtgcatttcactactggaactgtaa                                                    >  2:2498476‑M1/1‑50 (MQ=255)
                                                 atTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaat                                                   >  2:2835597‑M1/1‑50 (MQ=255)
                                                  ttGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                  <  1:3348599‑M1/100‑52 (MQ=255)
                                                   tGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                 <  2:1281850‑M1/100‑53 (MQ=255)
                                                        tGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaa                                            <  1:2766715‑M1/100‑58 (MQ=255)
                                                         gATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaag                                           <  1:561652‑M1/100‑59 (MQ=255)
                                                          atatTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaaga                                          <  2:174868‑M1/100‑60 (MQ=255)
                                                           tattatTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagat                                         <  1:1423210‑M1/100‑61 (MQ=255)
                                                           tattatTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagat                                         >  2:1098774‑M1/1‑40 (MQ=255)
                                                            attattAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                        <  1:3484178‑M1/100‑62 (MQ=255)
                                                            attataAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                        <  1:94283‑M1/100‑62 (MQ=255)
                                                             ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattcttgtgcatttcactactggaactgtaatcagaaaagat                                         >  2:1630072‑M1/1‑38 (MQ=255)
                                                             ttattaATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatag                                       >  2:3682332‑M1/1‑38 (MQ=255)
                                                              tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                      >  1:1688301‑M1/1‑37 (MQ=255)
                                                              tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                      <  1:1076211‑M1/100‑64 (MQ=255)
                                                              tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                      >  1:515621‑M1/1‑37 (MQ=255)
                                                              tattaATTCCACTGCCTTTGGTAGAGGAAAGTGAT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagn                                      <  2:1792844‑M1/100‑64 (MQ=255)
                                                               attaATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                     >  1:1775716‑M1/1‑36 (MQ=255)
                                                                 taATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacat                                   >  2:3722299‑M1/1‑34 (MQ=255)
                                                                 taATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacat                                   >  2:448061‑M1/1‑34 (MQ=255)
                                                                   aTTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgc                                 <  1:1990007‑M1/100‑69 (MQ=255)
                                                                     tCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctt                               <  1:2999326‑M1/100‑71 (MQ=255)
                                                                      ccACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctta                              >  2:582452‑M1/1‑29 (MQ=255)
                                                                      ccACTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctta                              <  1:2165304‑M1/100‑72 (MQ=255)
                                                                       cACTGCCTTTGGGAGAGGAAAGTGCT‑AAataataattaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttag                             <  2:2198781‑M1/100‑73 (MQ=255)
                                                                        aCTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                            <  1:2506639‑M1/100‑74 (MQ=255)
                                                                        aCTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                            <  1:1083715‑M1/100‑74 (MQ=255)
                                                                        aCTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagc                            <  1:1643842‑M1/100‑74 (MQ=255)
                                                                         cTGCCTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcc                           <  1:2250232‑M1/100‑75 (MQ=255)
                                                                            ccTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaat                        <  1:3722320‑M1/100‑78 (MQ=255)
                                                                            ccTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaat                        >  2:2296494‑M1/1‑23 (MQ=255)
                                                                             cTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                       <  2:3686150‑M1/100‑79 (MQ=255)
                                                                             cTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                       >  1:3418715‑M1/1‑22 (MQ=255)
                                                                             cTTTGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcaatactggaactgtaatcagaaaagatctacatgcttagccaatc                       >  2:3830278‑M1/1‑22 (MQ=255)
                                                                             cTTTGGTAGAGGAAAGTGCT‑AAataataataaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatc                       <  2:1588077‑M1/100‑79 (MQ=255)
                                                                              tttGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatct                      >  1:625675‑M1/1‑21 (MQ=255)
                                                                                tGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctct                    >  1:307996‑M1/1‑19 (MQ=255)
                                                                                tGGTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctct                    <  1:2296499‑M1/100‑82 (MQ=255)
                                                                                 ggTAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctcta                   >  2:2806582‑M1/1‑18 (MQ=255)
                                                                                   tAGAGGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatt                 <  1:964367‑M1/100‑85 (MQ=255)
                                                                                    agagGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctattt                >  1:987718‑M1/1‑15 (MQ=255)
                                                                                    agagGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctattt                >  1:1271020‑M1/1‑15 (MQ=255)
                                                                                     gagGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttg               <  1:2971801‑M1/100‑87 (MQ=255)
                                                                                     gagGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttg               >  1:4141197‑M1/1‑14 (MQ=255)
                                                                                     gagGAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttaactactggaactgtaatcagaaaagatagacatgcttagccaatctctattt                <  2:1047162‑M1/99‑86 (MQ=255)
                                                                                     gagGAAACTGCC‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagtaaagatagacatgcttagccaatctctatttg               >  2:2203277‑M1/1‑14 (MQ=255)
                                                                                       ggAAAGTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgat             <  2:132425‑M1/100‑89 (MQ=255)
                                                                                            gTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat        <  2:3306600‑M1/100‑94 (MQ=255)
                                                                                            gTGCT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat        <  2:154174‑M1/100‑94 (MQ=255)
                                                                                               cT‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattga     <  2:3858947‑M1/100‑97 (MQ=255)
                                                                                                t‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaa    >  2:1615114‑M1/1‑3 (MQ=255)
                                                                                                t‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaa    >  2:4190724‑M1/1‑3 (MQ=255)
                                                                                                t‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaa    <  1:3852224‑M1/100‑98 (MQ=255)
                                                                                                t‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaataga     >  2:1508353‑M1/1‑3 (MQ=255)
                                                                                                t‑AAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgatagatcggaa    >  2:1686302‑M1/1‑3 (MQ=255)
                                                                                                  aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa   <  1:1132424‑M1/100‑99 (MQ=255)
                                                                                                   aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaag  <  1:4181427‑M1/100‑100 (MQ=255)
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CCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCT‑AAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG  >  NC_000913/1299400‑1299597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.