| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2062567 = | 110 (0.740) | 21 (0.150) | 8/164 | NT | 17.9% | coding (757/933 nt) | ldtA | L,D‑transpeptidase linking Lpp to murein |
| ? | NC_000913 | 2062600 = | 91 (0.660) | coding (724/933 nt) | ldtA | L,D‑transpeptidase linking Lpp to murein | |||||
Only 100 of 157 total aligned reads displayed.
TTACATCAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATC > NC_000913/2062468‑2062666 | gtctgcgcaatgacgatatcaaatatctgtttgataatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccaga > 1:3239433‑M1/100‑100 (MQ=255)gtctgcgcaatgacgatatcaaatatctgtttgataatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccaga < 1:2661888‑M1/1‑1 (MQ=255) tACATCAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAAt > 2:4093026/1‑100 (MQ=255) tACATCAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAAt > 2:3952175/1‑100 (MQ=255) ctgcgcaatgacgatatcaaatatctgtttgataatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATg > 2:2612709‑M1/98‑100 (MQ=255) aCATCAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATg < 1:16143/100‑1 (MQ=255) tgcgcaatgacgatatcaaatatctgtttgataatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATgg > 1:294668‑M1/97‑100 (MQ=255) gcgcaatgacgatatcaaatatctgtttgataatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGc > 2:681667‑M1/96‑100 (MQ=255) aTCAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGc < 2:939358/100‑1 (MQ=255) aTCAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGc < 1:1304487/100‑1 (MQ=255) aTCAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGCTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGc > 1:1860994/1‑100 (MQ=255) tCAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCt > 1:124446/1‑100 (MQ=255) cgcaatgacgatatcaaatatctgtttgataatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCt < 2:856550‑M1/6‑1 (MQ=255) gcaatgacgatatcaaatatctgtttgataatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTc < 1:44339‑M1/7‑1 (MQ=255) cAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCtn < 2:4044080/100‑2 (MQ=255) cAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTc > 1:3463761/1‑100 (MQ=255) caatgacgatatcaaatatctgtttgataatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGc < 2:836573‑M1/5‑1 (MQ=255) aaCTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCa < 1:238597/100‑1 (MQ=255) aCTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCAt > 2:3472267/1‑100 (MQ=255) ttcttTCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGa > 2:238165/1‑100 (MQ=255) ttcttGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGa < 1:1781737/100‑1 (MQ=255) tcttGCCCGTTGATAAACGCCCGCAAAGACGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGaa < 2:2514745/100‑1 (MQ=255) cttGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAAc < 1:642197/100‑1 (MQ=255) ttGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACt < 1:3417339/100‑1 (MQ=255) gCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTc < 2:2340810/100‑1 (MQ=255) gCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTc > 2:3086412/1‑100 (MQ=255) cccGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTcc < 1:1583017/100‑1 (MQ=255) cGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTccag < 1:4093055/100‑1 (MQ=255) ttGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTccagcc < 2:2452599/100‑1 (MQ=255) cGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCGCGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAg > 2:2937115/1‑100 (MQ=255) gCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGc < 1:1358776/100‑1 (MQ=255) cccGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGcc > 1:327414/1‑100 (MQ=255) cccGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGGTCGAGcc > 1:3341083/1‑100 (MQ=255) tgataatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCa > 1:786126‑M1/69‑100 (MQ=255) taatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:3569841‑M1/66‑100 (MQ=255) taatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:3786043‑M1/66‑100 (MQ=255) taatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:2638888‑M1/66‑100 (MQ=255) taatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:2604730‑M1/66‑100 (MQ=255) aatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTg > 1:3886587‑M1/65‑100 (MQ=255) aatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTg > 2:1476480‑M1/65‑100 (MQ=255) aaaGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTg < 2:2862655/100‑1 (MQ=255) atgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTgg > 1:2703229‑M1/64‑100 (MQ=255) tgttcctgtttggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCCTGAACTTCCAGCCAGTTCGAGCCATCTGGt > 2:2758981‑M1/63‑100 (MQ=255) aGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGt > 1:1129226/1‑100 (MQ=255) gATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGtt > 2:2021969/1‑100 (MQ=255) aTGGGGTTACCGGCCATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTc < 2:2858281/100‑1 (MQ=255) aTGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTc < 2:3281928/100‑1 (MQ=255) tcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCa > 2:343697‑M1/60‑100 (MQ=255) tGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCa < 2:17784/100‑1 (MQ=255) ggggTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAg < 2:319105/100‑1 (MQ=255) ggTTACCGGCAATCGCACTTTTCGGTCAGCCTGATATACTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCCGTTCGAGCCATCTGGTTCAgtg > 2:354014/1‑100 (MQ=255) gTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAgtgg > 1:2495965/1‑100 (MQ=255) ttACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCTCGACAATGGCTCATGAACTTCCATCCAGTTCGAGCCATCTGGTTCAgtgg < 2:4177415/99‑1 (MQ=255) ttACAGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCAAGCCATCTGGTTCAgtgt < 2:1410019/99‑2 (MQ=255) tgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAgtggtg > 1:617881‑M1/54‑100 (MQ=255) tACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAgtggtg < 2:2179423/100‑1 (MQ=255) cGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGgtgt > 2:684347/1‑98 (MQ=255) cGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTAt > 2:1272206/1‑100 (MQ=255) ggCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTAtt > 2:435413/1‑100 (MQ=255) aTGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTAc < 2:2402511/100‑1 (MQ=255) aTGGCACTTTTCGGTCAGACTCATAATCTGAACGATTGCGCGACAATGGCTCATGAACTTACAGCCAGTTCGAGCCATCTTGTTCAGGGGTGTCTTCTaa > 2:2639564/1‑99 (MQ=255) ggCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTActg > 2:2772380/1‑100 (MQ=255) ggCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTActg > 2:1148031/1‑100 (MQ=255) cTTTTCTGTCCTCCTCCTATTCTGCATGATTGCGCGACAATGGTTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTTTTTTActggctg < 1:1314189/100‑1 (MQ=255) cTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTActggctg < 2:3003830/100‑1 (MQ=255) cTTTTCGGTCAGACTCATATTCTGCACGATTGCGCAACAATGGCTCATGAACTTCAAGCCAGTTCGAGCCATATGGTTCAGTGGTGTATTTTActggctg > 1:898742/1‑100 (MQ=255) ttttCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTActggctgg < 2:3152600/100‑1 (MQ=255) tttCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGt > 2:2016696/1‑100 (MQ=255) ttCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTc < 1:3170061/100‑1 (MQ=255) ggTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGAt > 2:1943214/1‑100 (MQ=255) gACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAAttt > 2:2361742/1‑100 (MQ=255) gACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAAttt > 1:2049434/1‑100 (MQ=255) gACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAAttt < 2:3854440/100‑1 (MQ=255) gACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAAttt > 1:2758750/1‑100 (MQ=255) gACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGCATTTTACTGGCTGGTCGATAAttt < 2:1795584/100‑1 (MQ=255) cTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTg > 2:2042590/1‑99 (MQ=255) cTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGc > 1:3157490/1‑100 (MQ=255) cTCATATTCGGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGGCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGc < 2:2641984/100‑1 (MQ=255) cTCACATTCTGCACGATTGCGCGACAATTGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTg < 2:3148109/99‑1 (MQ=255) tCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGca < 2:1260997/100‑1 (MQ=255) tCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGca < 1:796583/100‑1 (MQ=255) cATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGcac < 1:2471863/100‑1 (MQ=255) cATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGcac > 2:462796/1‑100 (MQ=255) cATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGcac < 2:3590089/100‑1 (MQ=255) ttCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACAcgc > 1:3695737/1‑100 (MQ=255) tCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACAcgcg > 2:57675/1‑100 (MQ=255) gCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTcc > 2:3891048/1‑100 (MQ=255) cACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTccc > 1:2868368/1‑100 (MQ=255) cACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTccc < 1:3567589/100‑1 (MQ=255) cACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTccc > 1:1609317/1‑100 (MQ=255) gATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAAc < 1:2943223/100‑1 (MQ=255) gATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAAc < 2:1395709/100‑1 (MQ=255) aTTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACa < 1:1968567/100‑1 (MQ=255) ttGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAg < 1:2361747/100‑1 (MQ=255) tGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAgg < 2:3372354/100‑1 (MQ=255) gcgcGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGa > 2:1136068/1‑100 (MQ=255) cgcgACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGaa > 2:3240910/1‑100 (MQ=255) ATGGCTCTTGAGCTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAt > 2:588493‑M1/1‑96 (MQ=255) ATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATc < 1:1730819‑M1/100‑1 (MQ=255) ATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATc > 2:3695716‑M1/1‑100 (MQ=255) | TTACATCAACTTCTTGCCCGTTGATAAACGCCCGCAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATC > NC_000913/2062468‑2062666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |