| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2062567 = | 110 (0.740) | 21 (0.150) | 8/164 | NT | 17.9% | coding (757/933 nt) | ldtA | L,D‑transpeptidase linking Lpp to murein |
| ? | NC_000913 | 2062600 = | 91 (0.660) | coding (724/933 nt) | ldtA | L,D‑transpeptidase linking Lpp to murein | |||||
Only 100 of 160 total aligned reads displayed.
CAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTGCGCAGACG > NC_000913/2062502‑2062699 | taatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:1774458‑M1/66‑100 (MQ=255)taatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:3786043‑M1/66‑100 (MQ=255)taatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:2638888‑M1/66‑100 (MQ=255)taatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:3569841‑M1/66‑100 (MQ=255)taatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:2604730‑M1/66‑100 (MQ=255)taatgttcctgttgggacgcgggtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCt > 1:3322537‑M1/66‑100 (MQ=255) aatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTg > 2:2371426‑M1/65‑100 (MQ=255) aatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTg > 2:2185540‑M1/65‑100 (MQ=255) aatgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTg > 1:452800‑M1/65‑100 (MQ=255) aatgtcccggttgggacgcgtgtgcaaattatcgaccagccagtaaactacaccactgaaccagATGGCACAGGAACTTCCAGCCAGTTCGAGCCATCTg > 1:1881580‑M1/65‑100 (MQ=255) atgttcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTgg > 1:2703229‑M1/64‑100 (MQ=255) aGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGt < 1:1602213/100‑1 (MQ=255) gATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGtt > 2:2021969/1‑100 (MQ=255) aTGGGGTTACCGGCCATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTc < 2:2858281/100‑1 (MQ=255) aTGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTc < 2:3281928/100‑1 (MQ=255) aTGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTc < 1:3478766/100‑1 (MQ=255) tcctgttgggacgcgtgtgcaaattatcgaccagccagtaaaatacaccactgaaccagATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCa > 2:343697‑M1/60‑100 (MQ=255) tGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCa < 2:17784/100‑1 (MQ=255) ggggTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAg < 2:319105/100‑1 (MQ=255) ggggTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAg > 2:1437346/1‑100 (MQ=255) ggTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAgtg < 2:495278/100‑1 (MQ=255) ggTTACCGGCAATCGCACTTTTCGGTCAGCCTGATATACTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCCGTTCGAGCCATCTGGTTCAgtg > 2:354014/1‑100 (MQ=255) gTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAgtgg > 1:3631180/1‑100 (MQ=255) cGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGgtgt > 2:684347/1‑98 (MQ=255) cGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTAt > 2:1272206/1‑100 (MQ=255) ggCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTAtt > 2:435413/1‑100 (MQ=255) aTGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTAc < 2:2402511/100‑1 (MQ=255) tgtcACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACGATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTAct < 2:3965930/97‑1 (MQ=255) ggCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTActg > 2:1148031/1‑100 (MQ=255) ggCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTActg < 1:1283546/100‑1 (MQ=255) cTTTTCTGTCCTCCTCCTATTCTGCATGATTGCGCGACAATGGTTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTTTTTTActggctg < 1:1314189/100‑1 (MQ=255) cTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTActggctg < 2:3003830/100‑1 (MQ=255) cTTTTCGGTCAGACTCATATTCTGCACGATTGCGCAACAATGGCTCATGAACTTCAAGCCAGTTCGAGCCATATGGTTCAGTGGTGTATTTTActggctg > 1:898742/1‑100 (MQ=255) tCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGATCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCg < 1:2961396/100‑1 (MQ=255) ggTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGAt > 2:1943214/1‑100 (MQ=255) gACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAAttt > 1:2758750/1‑100 (MQ=255) gACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAAttt > 1:2049434/1‑100 (MQ=255) gACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAAttt < 2:3854440/100‑1 (MQ=255) cTCATATTCGGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGGCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGc < 2:2641984/100‑1 (MQ=255) cTCACATTCTGCACGATTGCGCGACAATTGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTg < 2:3148109/99‑1 (MQ=255) tCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGca < 1:796583/100‑1 (MQ=255) cATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGcac < 1:2471863/100‑1 (MQ=255) cATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGcac < 2:3590089/100‑1 (MQ=255) ttCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACAcgc > 1:3695737/1‑100 (MQ=255) tCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACAcgcg > 2:57675/1‑100 (MQ=255) cACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTccc > 1:2868368/1‑100 (MQ=255) caccactgaaccagatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCa > 1:617881‑M2/48‑100 (MQ=255) gATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAAc < 2:1395709/100‑1 (MQ=255) gATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAAc < 1:2943223/100‑1 (MQ=255) aTTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACa < 1:1968567/100‑1 (MQ=255) ttGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAg < 1:2361747/100‑1 (MQ=255) tGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAgg < 2:4127387/100‑1 (MQ=255) tGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAgg < 2:2021687/100‑1 (MQ=255) cgcgACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGaa > 2:3240910/1‑100 (MQ=255) cgACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACa < 2:3463745/100‑1 (MQ=255) accagatggctcgaactggctggaagttcaggagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCAAACAGGAACa > 2:2758981‑M2/39‑100 (MQ=255) ccagatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAt > 1:2703229‑M2/38‑100 (MQ=255) ccagatggctcgaactggccggaagttcatgagccatATGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAt > 2:1638331‑M2/38‑100 (MQ=255) cagatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAtt > 1:452800‑M2/37‑100 (MQ=255) cagatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAtt > 1:3886587‑M2/37‑100 (MQ=255) cagatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAtt > 2:1476480‑M2/37‑100 (MQ=255) cagatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAtt > 2:2185540‑M2/37‑100 (MQ=255) cagatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAtt > 2:2371426‑M2/37‑100 (MQ=255) aCAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAtt < 2:2857773/100‑1 (MQ=255) agatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTa > 1:2607000‑M2/36‑100 (MQ=255) agatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTa > 1:1774458‑M2/36‑100 (MQ=255) agatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTa > 1:3786043‑M2/36‑100 (MQ=255) agatggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTa > 1:2604730‑M2/36‑100 (MQ=255) ATGGCTCTTGAGCTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACAt > 2:588493‑M1/1‑96 (MQ=255) ATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATc > 2:3695716‑M1/1‑100 (MQ=255) tggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCa > 2:44339‑M2/33‑100 (MQ=255) tggctcgaactggctggaagttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCa > 1:786126‑M2/33‑100 (MQ=255) CTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAAc < 2:33377‑M1/100‑1 (MQ=255) CTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAAc < 2:1137481‑M1/100‑1 (MQ=255) aTGACCCTCCGGCCAGTTCTAACCATCTGATTCAGTGGTGCATTTTACTGGCTGGTCGATAATATGCACACGCGTCCCAACAGGAACATTATCAAACa < 2:1094248/98‑1 (MQ=255) tGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACTTTATCAAACAggt < 1:2843173/100‑3 (MQ=255) tGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGat > 1:3158808/1‑100 (MQ=255) tGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGat > 1:168948/1‑100 (MQ=255) aaCTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGatat < 1:1003932/100‑1 (MQ=255) cTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATAttt < 1:3086425/100‑1 (MQ=255) cTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATAttt > 1:1714654/1‑100 (MQ=255) ttCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGTACACGCGTCCCAACAGGAACATTATCAAACCGATATTTg < 2:1671008/100‑1 (MQ=255) ttCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTg < 1:1107798/100‑1 (MQ=255) tCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGa < 1:222501/100‑1 (MQ=255) ccaggcagTTCCAGGCACCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGGCCCAACAGGAACATTATCAAACAGATATTTGa < 1:4197943/99‑1 (MQ=255) agccagTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGatat > 2:2693349/1‑100 (MQ=255) agccagTTCGAGCCATCTGGAAAAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCTCCAGCGTCCAAAAAAGAACATTATCAAACAGATATTTGatac > 2:2936622/1‑99 (MQ=255) ccagTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCg > 1:3464393/1‑100 (MQ=255) cagTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGt < 1:2732102/100‑1 (MQ=255) ttcatgagccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTc < 2:2638881‑M2/88‑1 (MQ=255) cGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTg > 2:2168324/1‑100 (MQ=255) cGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTg > 2:1492501/1‑100 (MQ=255) gccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTgcgc > 2:681667‑M2/6‑100 (MQ=255) gccatCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTg < 2:836573‑M2/92‑1 (MQ=255) catCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTGTGCAg > 2:1796823‑M2/4‑100 (MQ=255) catCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTGCGCAg > 2:2612709‑M2/4‑100 (MQ=255) atCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTGCGCAGa > 1:397280‑M2/3‑100 (MQ=255) tCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTGCGCAGAc > 1:3239433‑M2/2‑100 (MQ=255) tCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTGCGCAGAc < 1:2661888‑M2/99‑1 (MQ=255) cTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTGCGCAGACg > 1:953502/1‑100 (MQ=255) | CAAAGATGGGGTTACCGGCAATGGCACTTTTCGGTCAGACTCATATTCTGCACGATTGCGCGACAATGGCTCATGAACTTCCAGCCAGTTCGAGCCATCTGGTTCAGTGGTGTATTTTACTGGCTGGTCGATAATTTGCACACGCGTCCCAACAGGAACATTATCAAACAGATATTTGATATCGTCATTGCGCAGACG > NC_000913/2062502‑2062699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |