BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2662541	NA (NA)	11 (0.100)	8/164	NT	NA	noncoding (233/266 nt)	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
*	?	NC_000913	= 2662574	NA (NA)	11 (0.100)	8/164	NT	NA	noncoding (266/266 nt)	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 152 total aligned reads displayed.

TCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGG  >  NC_000913/2662442‑2662640

tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAg                                                                                                     >  1:1113028/1‑100 (MQ=11)

 cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGCACGCCTTATCCGACCTACGGATCTGTTCACTGTAGg                                                                                                    >  2:3266103‑M1/1‑99 (MQ=255)

  aCTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgc                                                                                                   <  1:2999790‑M1/100‑3 (MQ=255)

   cTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGCCCTACGGTTCTGTTCACTGTAGgcc                                                                                                  >  2:627161‑M1/1‑97 (MQ=255)

   cTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcc                                                                                                  <  2:1942990‑M1/100‑4 (MQ=255)

   cTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCCTATCCGACCTACGGTTCTGTTCACTGTAGgcc                                                                                                  <  1:3102503‑M1/100‑4 (MQ=255)

   cTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGCCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgc                                                                                                   <  2:3010148‑M1/99‑3 (MQ=255)

    tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcct                                                                                                 <  1:2337137‑M1/100‑5 (MQ=255)

    tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcct                                                                                                 >  1:3201962‑M1/1‑96 (MQ=255)

     gTAGGCCTGATAAGACGCATTACGCGTCGTATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTCATCCGACCTACGGTTCTGTTCACTGTAGgcctg                                                                                                <  2:1970076‑M1/100‑6 (MQ=255)

     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctg                                                                                                <  2:2694723‑M1/100‑6 (MQ=255)

     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctg                                                                                                <  1:2056973‑M1/100‑6 (MQ=255)

     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctg                                                                                                >  1:175393‑M1/1‑95 (MQ=255)

      tAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctga                                                                                               >  1:2108059‑M1/1‑94 (MQ=255)

       aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAGCGCCTTATCCGACCTACGGTTCTGGTCACTGTAGgcctgat                                                                                              >  2:2599977‑M1/1‑93 (MQ=255)

       aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgat                                                                                              >  1:3192079‑M1/1‑93 (MQ=255)

       aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgat                                                                                              <  1:2650078‑M1/100‑8 (MQ=255)

        ggCCTGATAAGCCGCATTACCCGTCCCATCAGGCAACGGCTGTCGGTCGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgat                                                                                              <  2:22564‑M1/99‑8 (MQ=255)

          ccTGATAAGCCGCCTCTCGCGTCGCTTCAGGCAACGGCTGTCGTATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgat                                                                                              <  2:527221‑M1/97‑8 (MQ=255)

            tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACCCCTTATCCGACCTACGGTACTGTGCACTGTAGgcctgatgata                                                                                          >  1:980750‑M1/1‑88 (MQ=255)

                  gACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGACGCGGCGTGAACGCCTTATCCGACCTGCGGGTCTGTTCACTGTAGgcctgatgatcc                                                                                         >  2:1991745‑M1/1‑82 (MQ=255)

                    cGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatg                                                                                 <  1:570762‑M1/100‑21 (MQ=255)

                           cgcgTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtctta                                                                          <  1:2623130‑M1/100‑28 (MQ=255)

                             cgTCGCATCAGGCAACGGCTGTCGGATGCGGCGTTAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgccagatgcgacgcgtactgcctcttatc                                                                        <  2:1715167‑M1/100‑30 (MQ=255)

                               tCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcaacgcgtaatgcgtcttatcag                                                                      <  2:1613435‑M1/100‑32 (MQ=255)

                                 gCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGccctgatgcgacgcgtaatgcgtcttatcaggc                                                                    <  1:3101686‑M1/100‑34 (MQ=255)

                                  cATCAGGCAACGGCTGTCGGATGCGGCGTGACCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcaggcc                                                                   <  1:2262151‑M1/100‑35 (MQ=255)

                                  cATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcaggcc                                                                   <  2:163737‑M1/100‑35 (MQ=255)

                                   aTCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcaggcct                                                                  <  2:2831128‑M1/100‑36 (MQ=255)

                                           aCGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCATAATAAGAGGCATTACGCGTTGCATCAGGCAACGGCTGtt                                                          >  2:3013384/1‑100 (MQ=11)

                                              gCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCGTTACGCGTCGCATCAGGCAACGGCTGTTAtt                                                       <  2:2864343/100‑1 (MQ=18)

                                                 GTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg                                                     <  1:657279‑M1/99‑1 (MQ=255)

                                                   CGGATGCGGCGTGAACGCCTCATCCGACCTACGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGc                                                   >  2:2277919‑M1/1‑99 (MQ=255)

                                                    GGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt                                                 <  2:1285678‑M1/100‑1 (MQ=255)

                                                    GGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt                                                 <  1:1889010‑M1/100‑1 (MQ=255)

                                                    GGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt                                                 <  1:1050265‑M1/100‑1 (MQ=255)

                                                      ATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCTTATCAGGCAACGGCTGTTATTCGGCCTTg                                               >  1:1991751‑M1/1‑100 (MQ=255)

                                                       TGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGt                                              <  1:1255366‑M1/100‑1 (MQ=255)

                                                       TGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGt                                              >  1:2252169‑M1/1‑100 (MQ=255)

                                                        gcggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt                                             >  2:1736662/1‑100 (MQ=255)

                                                         cggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt                                             <  2:2108052/99‑1 (MQ=255)

                                                         cggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa                                            <  1:941330/100‑1 (MQ=255)

                                                          ggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTGATTCGGCCTTGTTAc                                           >  1:3219002/1‑100 (MQ=255)

                                                           gcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                          <  1:2428695/100‑1 (MQ=255)

                                                           gcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                          <  1:881711/100‑1 (MQ=255)

                                                            cgTGAACGCCTTATCCGACCTACGGTCCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                          <  2:3244165/99‑1 (MQ=255)

                                                             gTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCtt                                        <  2:1362413/100‑1 (MQ=255)

                                                             gTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCtt                                        <  2:1236031/100‑1 (MQ=255)

                                                              tGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCtt                                        <  2:2797019/99‑1 (MQ=255)

                                                               gAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa                                      >  2:2317359/1‑100 (MQ=255)

                                                               gAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa                                      >  1:830768/1‑100 (MQ=255)

                                                               gAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa                                      >  1:1529954/1‑100 (MQ=255)

                                                                aaCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt                                     >  1:407711/1‑100 (MQ=255)

                                                                aaCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt                                     >  1:2103250/1‑100 (MQ=255)

                                                                aaCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt                                     <  1:182375/100‑1 (MQ=255)

                                                                 aCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAtt                                    <  1:1441254/100‑1 (MQ=255)

                                                                 aCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAtt                                    >  2:754396/1‑100 (MQ=255)

                                                                  cGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc                                   <  2:1229653/100‑1 (MQ=255)

                                                                  cGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc                                   <  1:2875480/100‑1 (MQ=255)

                                                                  cGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc                                   >  1:596451/1‑100 (MQ=255)

                                                                   gCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTct                                  <  1:2425199/100‑1 (MQ=255)

                                                                    ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                                 <  2:3126889/100‑1 (MQ=255)

                                                                     cgcaTCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgc                                <  2:2443859/97‑1 (MQ=255)

                                                                     cTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                                 <  2:136718/99‑1 (MQ=255)

                                                                      ttATCCGAGCTACGGGTCTTTTCACTGTTGTCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGTCTGTTATTCGGCCTTGTTACCTTTATTctgct                               <  1:1908395/100‑1 (MQ=18)

                                                                          ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTc                           <  1:1229082/100‑1 (MQ=255)

                                                                          ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTc                           <  1:368943/100‑1 (MQ=255)

                                                                          ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTc                           >  1:2739903/1‑100 (MQ=255)

                                                                           cGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCa                          <  1:2136549/100‑1 (MQ=255)

                                                                           cGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCa                          <  2:713112/100‑1 (MQ=255)

                                                                             aCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAAt                        <  2:2192368/100‑1 (MQ=255)

                                                                              ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAAt                        <  2:1304748/99‑1 (MQ=255)

                                                                              ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                       <  2:873434/100‑1 (MQ=255)

                                                                              ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                       <  2:620430/100‑1 (MQ=255)

                                                                               cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg                      >  2:2740941/1‑100 (MQ=255)

                                                                               cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg                      <  1:2531860/100‑1 (MQ=255)

                                                                                tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa                     >  1:2757525/1‑100 (MQ=255)

                                                                                tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa                     <  1:2861411/100‑1 (MQ=255)

                                                                                    gTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc                 <  2:3139056/100‑1 (MQ=255)

                                                                                     ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCa                <  1:1602056/100‑1 (MQ=255)

                                                                                      tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg               <  2:2545001/100‑1 (MQ=255)

                                                                                      tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg               <  2:821397/100‑1 (MQ=255)

                                                                                      tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg               <  1:2809836/100‑1 (MQ=255)

                                                                                       cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa              >  1:834218/1‑100 (MQ=255)

                                                                                       cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa              >  2:2845048/1‑100 (MQ=255)

                                                                                       cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa              >  1:3226962/1‑100 (MQ=255)

                                                                                        tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGaa             >  2:1018725/1‑100 (MQ=255)

                                                                                         gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTCTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa              >  2:1140014/1‑98 (MQ=255)

                                                                                           tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc          >  1:66074/1‑100 (MQ=255)

                                                                                           tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc          >  1:1504182/1‑100 (MQ=255)

                                                                                           tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc          <  1:2099882/100‑1 (MQ=255)

                                                                                            cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc         >  2:723568/1‑100 (MQ=255)

                                                                                             aCTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcg        <  1:2861427/100‑1 (MQ=255)

                                                                                              cTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcgc       >  2:2890261/1‑100 (MQ=255)

                                                                                              cTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcgc       <  1:2812534/100‑1 (MQ=255)

                                                                                                gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCgcgc     <  2:472282/100‑1 (MQ=255)

                                                                                                 tAGGCCTGATAGGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCa    >  2:2471223/1‑100 (MQ=255)

                                                                                                 tAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCa    <  2:2673291/100‑1 (MQ=255)

                                                                                                  aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAg   <  2:2586735/100‑1 (MQ=255)

                                                                                                   ggCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAgg  <  1:198168/100‑1 (MQ=255)

TCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGG  >  NC_000913/2662442‑2662640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.