New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3539757 =NA (NA)5 (0.050) 4/160 NT NA noncoding (12/34 nt) REP252 (repetitive extragenic palindromic) element; contains 1 REP sequences REP252 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3539792 = NA (NA)intergenic (+86/‑371) yhgF/feoA putative transcriptional accessory protein/ferrous iron transporter, protein A

Only 100 of 184 total aligned reads displayed.

AGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATA  >  NC_000913/3539659‑3539856
                                                                                                  |                                                                                                   
 gcgcGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAg                                                                                                   >  2:955190/1‑100 (MQ=255)
 gcgcGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAg                                                                                                   >  1:1096584/1‑100 (MQ=255)
 gcgcGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAg                                                                                                   <  2:598225/100‑1 (MQ=255)
  gttgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAgg                                                                                                  >  1:184936‑M1/97‑100 (MQ=255)
  cgcgATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAgg                                                                                                  <  2:1140280/100‑1 (MQ=255)
   gcgATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGc                                                                                                 <  1:839768/100‑1 (MQ=255)
    tgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCg                                                                                                >  2:2910924‑M1/95‑100 (MQ=255)
    cgATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCg                                                                                                <  2:1378784/100‑1 (MQ=255)
      atgatgGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGtt                                                                                              >  2:2419143/1‑100 (MQ=255)
       taatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgcaggagatattttctggcacttttatgtcaggcAAGGCGTTc                                                                                             <  2:2094116‑M1/9‑1 (MQ=255)
        gatggatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCa                                                                                            >  1:921853/1‑100 (MQ=255)
          tggatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAcg                                                                                          >  1:1701033/1‑100 (MQ=255)
          tggatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAcg                                                                                          >  1:2226207/1‑100 (MQ=255)
               gcgcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCa                                                                                     <  1:3133498/100‑1 (MQ=255)
                cgcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCAt                                                                                    >  1:1046156/1‑100 (MQ=255)
                  ntGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCt                                                                                  >  2:1545423/2‑100 (MQ=255)
                  cTGGCGGCGGCAATGGGCAAAAAACGTTAAACGTCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCt                                                                                  >  1:1027395/1‑100 (MQ=255)
                    ggcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTgg                                                                                <  2:1399863/100‑1 (MQ=255)
                    ggcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTgg                                                                                <  1:3228095/100‑1 (MQ=255)
                    ggcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTgg                                                                                >  1:17353/1‑100 (MQ=255)
                     gcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGc                                                                               >  2:70300/1‑100 (MQ=255)
                     gcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGc                                                                               <  2:2224195/100‑1 (MQ=255)
                     gcggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGc                                                                               <  1:168159/100‑1 (MQ=255)
                      cggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCa                                                                              >  1:1153080/1‑100 (MQ=255)
                        gcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCaac                                                                            >  1:1748719/1‑100 (MQ=255)
                         cggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCaacg                                                                           >  1:1794187/1‑100 (MQ=255)
                           gcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCaacgaa                                                                         <  2:1285522/100‑1 (MQ=255)
                             aaTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTACGGCAGATAAGGCGTTCACGCCGCACCTGGCaacgaacg                                                                       <  2:2021169/100‑1 (MQ=255)
                               tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGcc                                                                     >  2:1956690/1‑100 (MQ=255)
                               tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGcc                                                                     <  1:764017/100‑1 (MQ=255)
                                gggCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCt                                                                    >  2:2633140/1‑100 (MQ=255)
                                gggCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCt                                                                    >  1:3039288/1‑100 (MQ=255)
                                  gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg                                                                  >  1:3187134/1‑100 (MQ=255)
                                  atattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg                                                                  >  1:2846000‑M1/65‑100 (MQ=255)
                                   cAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGc                                                                 >  2:2470285/1‑100 (MQ=255)
                                    aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGcc                                                                >  1:1334127/1‑100 (MQ=255)
                                    aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGcc                                                                <  1:265443/100‑1 (MQ=255)
                                     ttatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCt                                                               >  1:2690148‑M1/62‑100 (MQ=255)
                                      aaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTg                                                              >  1:2262555/1‑100 (MQ=255)
                                      aaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATGTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTg                                                              >  2:1750264/1‑100 (MQ=255)
                                       aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGa                                                             >  2:2789306/1‑100 (MQ=255)
                                        aaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACTAAATCGTAGGGCAGAGAAGGCGTTCACGCCGCAGCTGGCAACGAACGCCTTGCCTGAc                                                            >  2:270631/1‑100 (MQ=255)
                                        aaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGAc                                                            <  2:2886881/100‑1 (MQ=255)
                                         aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACa                                                           <  1:2993275/100‑1 (MQ=255)
                                         aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACa                                                           >  1:1181879/1‑100 (MQ=255)
                                         aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACa                                                           >  1:438579/1‑100 (MQ=255)
                                         aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACa                                                           <  1:2673508/100‑1 (MQ=255)
                                             tAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaaa                                                       <  1:1902823/100‑1 (MQ=255)
                                             tAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATa                                                         >  2:1583421/1‑98 (MQ=255)
                                              aaaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaaaa                                                      >  1:2021838/1‑100 (MQ=255)
                                              aaaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAAAGCCTTGCCTGACATaaaa                                                      >  1:2773018/1‑100 (MQ=255)
                                               aaCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg                                                     <  2:1447347/100‑1 (MQ=255)
                                                 cGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg                                                   >  1:2776226/1‑100 (MQ=255)
                                                  gCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGc                                                  >  1:2446439/1‑100 (MQ=255)
                                                   cccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc                                                 >  1:2258060/1‑100 (MQ=255)
                                                    ccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCg                                                <  1:1382785/100‑1 (MQ=255)
                                                    ccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCg                                                <  2:1831787/100‑1 (MQ=255)
                                                     cGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCgg                                               <  2:411417/100‑1 (MQ=255)
                                                       tACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgag                                             <  1:2390662/100‑1 (MQ=255)
                                                         cTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa                                           <  2:3157762/100‑1 (MQ=255)
                                                           ggCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCCACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAata                                         <  2:1748714/100‑1 (MQ=255)
                                                           ggCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAata                                         >  2:1879899/1‑100 (MQ=255)
                                                            nccTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat                                        >  1:1357236/2‑100 (MQ=255)
                                                            gCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat                                        >  2:458801/1‑100 (MQ=255)
                                                              cTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtct                                      >  1:211065/1‑100 (MQ=255)
                                                               tACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtctc                                     >  2:467506/1‑100 (MQ=255)
                                                                aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCGGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAGCTcc                                    <  1:558946/100‑1 (MQ=255)
                                                                  ggTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCgg                                  >  1:255092/1‑100 (MQ=255)
                                                                  ggTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCgg                                  >  1:2172535/1‑100 (MQ=255)
                                                                   gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGc                                 >  2:1156073/1‑100 (MQ=255)
                                                                   gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGc                                 >  1:502186/1‑100 (MQ=255)
                                                                   gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGc                                 >  2:1616896/1‑100 (MQ=255)
                                                                   gTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGc                                 <  2:921851/100‑1 (MQ=255)
                                                                      cGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtt                              >  1:2305934/1‑100 (MQ=255)
                                                                       gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAttt                             >  1:1336479/1‑100 (MQ=255)
                                                                       gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAttt                             >  1:686427/1‑100 (MQ=255)
                                                                          tttGCACGAAATCGTAGGGCAGATAAGGCGGTCGCGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCTGGCATTTTTa                          >  2:2157538/1‑100 (MQ=255)
                                                                              cACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTcc                      <  2:2398542/100‑1 (MQ=255)
                                                                              cACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTcc                      <  2:199196/100‑1 (MQ=255)
                                                                               aCGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCca                     <  1:1956696/100‑1 (MQ=255)
                                                                                cGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcac                    <  1:1545427/100‑1 (MQ=255)
                                                                                cGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcac                    >  1:69635/1‑100 (MQ=255)
                                                                                  aaaTCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAg                  <  1:938047/100‑1 (MQ=255)
                                                                                  aaaTCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAg                  <  2:2226197/100‑1 (MQ=255)
                                                                                  aaaTCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAg                  >  1:1296464/1‑100 (MQ=255)
                                                                                   aatgggaGGGCAGAGAAGGCGTTCACGGCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGc                 <  2:2266267/94‑1 (MQ=255)
                                                                                    aTCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGcc                <  1:2157547/100‑1 (MQ=255)
                                                                                       gTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCaaa             >  1:439679/1‑100 (MQ=255)
                                                                                         aGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACt           >  1:763018/1‑100 (MQ=255)
                                                                                         aGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAAAGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACt           <  1:816814/100‑1 (MQ=255)
                                                                                          gggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTc          >  1:2230432/1‑100 (MQ=255)
                                                                                          gggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTc          <  1:2648818/100‑1 (MQ=255)
                                                                                            gCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGACTATCTCCGGCCTTTTTATTCCACAGcga               >  2:822036/1‑91 (MQ=255)
                                                                                            gCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCa         <  2:101679/99‑1 (MQ=255)
                                                                                              aGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCataa      <  1:2419153/100‑1 (MQ=255)
                                                                                               gATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCataat     >  1:567136/1‑100 (MQ=255)
                                                                                               gATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAACATATCTCCGGCATTTTTATTCCACAGCAAAACTCata       >  2:2075318/1‑98 (MQ=255)
                                                                                                aTAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCataata    <  2:2762502/100‑1 (MQ=255)
                                                                                                 tAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAatat   <  1:2491612/100‑1 (MQ=255)
                                                                                                  AAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAatata  <  2:2124365‑M1/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
AGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATA  >  NC_000913/3539659‑3539856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.