| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4542537 = | 107 (0.880) | 3 (0.030) | 6/168 | NT | 2.9% | coding (501/597 nt) | fimE | tyrosine recombinase/inversion of on/off regulator of fimA |
| ? | NC_000913 | 4542560 = | 99 (0.860) | coding (524/597 nt) | fimE | tyrosine recombinase/inversion of on/off regulator of fimA | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
Only 100 of 135 total aligned reads displayed.
TCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTT > NC_000913/4542438‑4542636 | ttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcatt > 1:3073720‑M1/100‑100 (MQ=255)tCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCAt < 1:2586275/100‑1 (MQ=255) taactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcatTa < 1:2785963‑M1/2‑1 (MQ=255) taactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcatTa < 1:1734393‑M1/2‑1 (MQ=255) taactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcatTa < 1:1641225‑M1/2‑1 (MQ=255) cTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATAc > 2:327256/1‑100 (MQ=255) aactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcatTAc < 1:265840‑M1/3‑1 (MQ=255) actttattatcaataagttaaatgaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcatTACt > 1:1509851‑M1/97‑100 (MQ=255) ctttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcatTACtg < 1:1467754‑M1/5‑1 (MQ=255) ctttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcatTACtg < 2:1686538‑M1/5‑1 (MQ=255) cATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACtg > 1:2415615/1‑100 (MQ=255) tatGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACtgt > 2:3119868/1‑99 (MQ=255) tGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCg < 2:351913/100‑1 (MQ=255) tGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCg > 2:1763983/1‑100 (MQ=255) tAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTta > 1:2978353/1‑100 (MQ=255) aaGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTtat < 1:1763988/100‑1 (MQ=255) ggCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATAc > 2:1034187/1‑100 (MQ=255) gCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATAcc < 2:2341733/100‑1 (MQ=255) cATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCg < 1:2421268/100‑1 (MQ=255) cATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAAGATTCGCCATACTGTGCGTTGTAcc > 2:1951410/1‑99 (MQ=255) tGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGc‑c < 1:2193272/100‑1 (MQ=255) tGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGc‑c < 1:836235/100‑1 (MQ=255) tGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGc‑c < 2:2595229/100‑1 (MQ=255) gCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑Ca > 1:509617/1‑100 (MQ=255) gCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑Ca > 2:3141581/1‑100 (MQ=255) ttGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGt < 2:60688/100‑1 (MQ=255) ttGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGt < 1:3304/100‑1 (MQ=255) ttGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGt > 1:2235607/1‑100 (MQ=255) tGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTa > 1:1257300/1‑100 (MQ=255) tGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTa < 1:1431115/100‑1 (MQ=255) aTGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAAtgctgc < 1:2901046/100‑1 (MQ=255) ttGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGtt > 1:702723/1‑100 (MQ=255) ggCGGAGTGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGtttt < 2:3257907/100‑1 (MQ=255) ggCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGtttt > 1:2936399/1‑100 (MQ=255) ggCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGtttt > 1:1165624/1‑100 (MQ=255) ggCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGtttt > 1:836450/1‑100 (MQ=255) cGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGc > 1:1918187/1‑100 (MQ=255) ggAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGcc < 2:785943/100‑1 (MQ=255) ggAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGcc < 1:3043472/100‑1 (MQ=255) ggAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGcc > 1:1442063/1‑100 (MQ=255) gCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGACATATTCGCCATACTGTGCGTTATCCCGC‑CACTAATGCTGCTCGTTTTGCCg > 2:2262786/1‑98 (MQ=255) gtggtgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGAtt < 2:2242068/100‑1 (MQ=255) ggtgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTAt > 2:1734388/1‑100 (MQ=255) ggtgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTAt > 2:1991463/1‑100 (MQ=255) ggtgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTAt > 1:3073479/1‑100 (MQ=255) ggtgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTAt > 2:65421/1‑100 (MQ=255) agtgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGGCATACTGTGCGTTATACCGC‑CAGTAATTCTGCACGATTTGcaagaata > 2:313877/2‑92 (MQ=255) gtgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATg < 2:1100764/100‑1 (MQ=255) tgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTTGCCATAGTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGGCGGATTATgg > 2:1467750/1‑100 (MQ=255) tgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATgg < 2:1257297/100‑1 (MQ=255) tgCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATgg < 2:2478005/100‑1 (MQ=255) gCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATggg < 2:1570013/100‑1 (MQ=255) ttccgatctgTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGga < 1:906303/91‑1 (MQ=255) aGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGgaa > 2:1833707/1‑100 (MQ=255) aGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGgaa > 1:2725165/1‑100 (MQ=255) aGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGgaa < 1:2661883/100‑1 (MQ=255) tACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGgaaaga > 2:715064/1‑100 (MQ=255) tACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGgaaaga < 2:1350804/100‑1 (MQ=255) cTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGgaaagaaa > 1:2058239/1‑100 (MQ=255) cTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGgaaagaaa > 1:1950987/1‑100 (MQ=255) tCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAaat < 2:1538682/100‑1 (MQ=255) tCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAaat < 1:3150441/100‑1 (MQ=255) cGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAaata > 1:76847/1‑100 (MQ=255) tttAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAaataat < 1:2602313/100‑1 (MQ=255) tAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAAtct > 1:3140854/1‑100 (MQ=255) aaTTCAGGATTATCTCGGGCATCGAAATATTCGCGATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAGGAAGTAAtctc < 2:1719907/100‑1 (MQ=255) aaTTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAAtctn < 2:2967175/100‑2 (MQ=255) cAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATaa > 1:2088674/1‑100 (MQ=255) cAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATaa > 2:2194439/1‑100 (MQ=255) aGGATTATCTCGGGCATCGACATATCCGCCATACTGTGCGTTATACCGC‑CCGTAAAGCTCCTCATTTTGCCGTATTATGGGAATGAAATAATCTTATaaa > 2:2594623/1‑100 (MQ=255) ggATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAAc > 1:335965/1‑100 (MQ=255) ggATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAAc < 1:1228460/100‑1 (MQ=255) ggATTATCTCGGCCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAAc < 2:731631/100‑1 (MQ=255) aTCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGCAATAATCTCATAAACGaaaa < 2:1995526/100‑1 (MQ=255) aTCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGaaaa < 1:2783219/100‑1 (MQ=255) aTCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑AAGGAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGaaaa < 2:517725/100‑1 (MQ=255) tctgaggCATCGAAATATTCGCCATACTGTGCGTTAGACCGC‑CAGTAATGCTGATCGTTTTGCAGGATTATGGGAAAGAAATAATCTCATAAACGaaaaa < 2:125753/95‑1 (MQ=255) tctcGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGaaaaa > 1:175155/1‑100 (MQ=255) tctcGGGCATCGAAATATACGCTATCCTGTGCGTTATACCGC‑CAGTAATGCTGCTCTTTTTGCCGGCTTATGGGAAAGAAATACTCTCATAAACGa < 2:614220/96‑1 (MQ=255) tcGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAAtt < 2:1026746/100‑1 (MQ=255) cGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTa > 1:1876924/1‑100 (MQ=255) cGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTa > 2:1392566/1‑100 (MQ=255) gggCATCGAAATATTCGCCAGACTGTGCGTTATACCGC‑CAGTAATGATTCTCGTTTGGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAAt < 2:2744441/97‑1 (MQ=255) ggCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTaaa < 2:89639/100‑1 (MQ=255) gCATCGAAATATTTGCCATACTGTGCGTTATACCGC‑GAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTaaaa < 2:2915035/100‑1 (MQ=255) gCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTaaaa < 1:1530530/100‑1 (MQ=255) aTCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAaag < 1:591803/100‑1 (MQ=255) atTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAgg < 2:1343196/100‑1 (MQ=255) atTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAgg > 1:338851/1‑100 (MQ=255) gcagcatTACTG‑GCGGTATAACGCACAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGt < 2:1467138‑M1/93‑1 (MQ=255) cagcatTACTG‑GCGGTATAACGCACAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGtt < 1:2050626‑M1/94‑1 (MQ=255) cGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGttt > 1:2699880/1‑100 (MQ=255) cGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGtt < 2:1627361/99‑1 (MQ=255) gcatTACTG‑GCGGTATAACGCACAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTg < 1:2573751‑M1/96‑1 (MQ=255) ccATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGa < 2:2699866/100‑1 (MQ=255) atTACTG‑GCGGTATAACGCACAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGAt < 1:236638‑M1/98‑1 (MQ=255) aTACTGTGCGTTATACGGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAAAAAAAAAAAAAAAAGAGAAGAGGTTTGAtt < 2:1918181/100‑1 (MQ=255) aTACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGAtt < 2:2870788/100‑1 (MQ=255) TACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGAttt > 2:2626322‑M1/1‑100 (MQ=255) TACTGAGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATAAAAAAAAAAAAAAATTAAAAAGAGAAGAGGTTTGAttt > 2:2415605‑M1/1‑100 (MQ=255) | TCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGC‑CAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTT > NC_000913/4542438‑4542636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |