New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3650712 =NA (NA)7 (0.060) 5/164 NT NA noncoding (1/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 3650744 = NA (NA)noncoding (33/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 149 total aligned reads displayed.

AGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGC  >  NC_000913/3650613‑3650811
                                                                                                   |                                                                                                   
aGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATg                                                                                                     >  2:294965/1‑100 (MQ=255)
 cgcagggggtactgtgtaaatagcaaaatcgcctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGt                                                                                                    >  1:677508‑M1/99‑100 (MQ=255)
   cagggagtactgtgtaaatagcaaaatcgcctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCg                                                                                                  >  2:2741715‑M1/97‑100 (MQ=255)
    agggagtactgtgtaaatagcaaaatcgcctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCgg                                                                                                 >  2:3279330‑M1/96‑100 (MQ=255)
     gggagtactgtgtaaatagcaaaatcgcctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCGGa                                                                                                <  2:2576104‑M1/6‑1 (MQ=255)
      ggagtactgtgtaaatagcaaaatcgcctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCGGa                                                                                                >  1:2632477‑M1/94‑99 (MQ=255)
       tGGCGAGAAAGTGGTTGATGATGCGGGTAAGCGCCTGAAATAAAGCGTCGATATCTCCCCCACAGGTTGTTAGAATAGTGCGCTTTATTTATGTCGGATg                                                                                              <  1:317765/100‑1 (MQ=255)
       tGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATg                                                                                              >  2:1358111/1‑100 (MQ=255)
       tGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATg                                                                                              >  2:2837323/1‑100 (MQ=255)
       gagtactgtgtaaatagcaaaatcgcctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCGGatn                                                                                              >  1:1735649‑M1/93‑99 (MQ=255)
        ggCGAGAAATTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGc                                                                                             <  1:1310904/100‑1 (MQ=255)
        ggCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGc                                                                                             <  2:54231/100‑1 (MQ=255)
         gCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCg                                                                                            >  1:2172703/1‑100 (MQ=255)
          cGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGa                                                                                           >  2:2892279/1‑100 (MQ=255)
                   ggTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGgcgc                                                                                  >  2:1213643/1‑100 (MQ=255)
                   ggTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGgcgc                                                                                  >  1:2500871/1‑100 (MQ=255)
                   ggTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCATTGTTTATGTCGGATGCGGCGCTGgcgc                                                                                  >  2:2507208/1‑100 (MQ=255)
                    gTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGcgcg                                                                                 <  1:829182/100‑1 (MQ=255)
                      tgatgaAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGgcg                                                                                   >  1:783236/1‑96 (MQ=255)
                      tgatgaAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGtn                                                                               <  2:2637133/100‑2 (MQ=255)
                      tgatgaAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTc                                                                               <  2:2666362/100‑1 (MQ=255)
                       gatgaAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCt                                                                              >  1:2124736/1‑100 (MQ=255)
                         aaaatcgcctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCGGATAAGACGCTGGCGCGTCTTa                                                                            >  1:1649511‑M1/75‑100 (MQ=255)
                           aaGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATc                                                                          <  1:553064/100‑1 (MQ=255)
                           aaGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATc                                                                          <  2:2619561/100‑1 (MQ=255)
                            atcgcctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCGGATAAGACGCTGGCGCGTCTTATcc                                                                         >  1:378160‑M1/72‑100 (MQ=255)
                            atcgcctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCGGATAAGACGCTGGCGCGTCTTATcc                                                                         >  2:1278600‑M1/72‑100 (MQ=255)
                                ngTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTCTATTTAACTCGGATGCGACGCTGGCGCGTCTTATCCGAc                                                                      >  1:1136855/2‑99 (MQ=255)
                                cctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGAcc                                                                     >  1:1731839‑M1/68‑100 (MQ=255)
                                  tAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                   <  2:1077200/100‑1 (MQ=255)
                                    aGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACa                                                                 >  1:1350707/1‑100 (MQ=255)
                                    aGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACa                                                                 >  2:1061866/1‑100 (MQ=255)
                                       gcCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAg                                                              <  2:2800946/100‑1 (MQ=255)
                                          tGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTa                                                           >  2:2892766/1‑100 (MQ=255)
                                              aTAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGaa                                                       >  1:1665577/1‑100 (MQ=255)
                                              aTAAAGCGGCGATATCCCCCCCACAGGGTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTAt                                                          <  2:313350/97‑1 (MQ=255)
                                                aaaGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGaaaa                                                     >  1:1855041/1‑100 (MQ=255)
                                                 aaGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAAt                                                    >  2:2192180/1‑100 (MQ=255)
                                                 aaGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAAt                                                    >  2:2240747/1‑100 (MQ=255)
                                                   gcggcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTc                                                  <  2:1592473/100‑1 (MQ=255)
                                                    cggcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCg                                                 >  2:1369869/1‑100 (MQ=255)
                                                     ggcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGa                                                >  2:2958379/1‑100 (MQ=255)
                                                     ggcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGa                                                <  2:263771/100‑1 (MQ=255)
                                                      gcgATATCCTCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                               <  1:25094/100‑1 (MQ=255)
                                                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTGGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                               <  2:1747479/100‑1 (MQ=255)
                                                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                               <  2:2767913/100‑1 (MQ=255)
                                                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                               <  1:302347/100‑1 (MQ=255)
                                                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                               <  2:3141579/100‑1 (MQ=255)
                                                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                              >  2:1126867/1‑100 (MQ=255)
                                                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                              >  1:3271941/1‑100 (MQ=255)
                                                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                              <  1:364185/100‑1 (MQ=255)
                                                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                              <  2:3111799/100‑1 (MQ=255)
                                                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                              <  1:1420869/100‑1 (MQ=255)
                                                           atCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATa                                          <  1:1061863/100‑1 (MQ=255)
                                                            tCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAg                                         >  2:533259/1‑100 (MQ=255)
                                                              ccccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTa                                       <  1:1179699/100‑1 (MQ=255)
                                                              ccccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTa                                       >  2:2102438/1‑100 (MQ=255)
                                                                ccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATg                                     <  1:2892253/100‑1 (MQ=255)
                                                                ccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATg                                     >  2:1566034/1‑100 (MQ=255)
                                                                 cccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGt                                    >  2:2819898/1‑100 (MQ=255)
                                                                 cccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGt                                    >  2:3119793/1‑100 (MQ=255)
                                                                        gttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                             <  1:548806/100‑1 (MQ=255)
                                                                        gttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                             <  1:2164831/100‑1 (MQ=255)
                                                                        gttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                             <  1:2763414/100‑1 (MQ=255)
                                                                        cttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTg                              <  1:1470299/98‑1 (MQ=255)
                                                                           nttaGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGG                          >  1:3172234‑M1/2‑100 (MQ=255)
                                                                           gTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGG                          <  2:178605‑M1/100‑1 (MQ=255)
                                                                            ttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGC                         <  1:1152353‑M1/100‑1 (MQ=255)
                                                                             tAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCC                        <  2:3271967‑M1/100‑1 (MQ=255)
                                                                              aGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCT                       >  1:2322280‑M1/1‑100 (MQ=255)
                                                                               gAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTaagatcg                      >  1:2811451/1‑94 (MQ=255)
                                                                               gAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTG                      >  1:1089352‑M1/1‑100 (MQ=255)
                                                                               gAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTG                      <  2:1272828‑M1/100‑1 (MQ=255)
                                                                                 aaaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAc                    <  2:1601354/100‑1 (MQ=255)
                                                                                  aaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACa                   <  1:946680/100‑1 (MQ=255)
                                                                                   aGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAg                  <  2:359677/100‑1 (MQ=255)
                                                                                   aGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAg                  <  2:621887/100‑1 (MQ=255)
                                                                                      gcgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCg               <  2:649628/100‑1 (MQ=255)
                                                                                      gcgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCg               <  1:3221857/100‑1 (MQ=255)
                                                                                      gcgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCg               <  1:681815/100‑1 (MQ=255)
                                                                                       cgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGt              <  1:1544487/100‑1 (MQ=255)
                                                                                       cgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGt              >  2:2032311/1‑100 (MQ=255)
                                                                                       cgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGt              >  2:350343/1‑100 (MQ=255)
                                                                                        gcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTa             >  1:131098/1‑100 (MQ=255)
                                                                                         cTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAg            >  2:1581570/1‑100 (MQ=255)
                                                                                          tttatttaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgc           <  1:2882993/100‑1 (MQ=255)
                                                                                            tatttatGTCGGATGCGACGCTGTCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcgc         <  2:1210496/100‑1 (MQ=255)
                                                                                            tatttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcgc         >  2:2353646/1‑100 (MQ=255)
                                                                                            tatttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcgc         >  2:2080084/1‑100 (MQ=255)
                                                                                             atttatGTCTGATGCGACGCTGGCGCGTCTTATCCGACTTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCATGACAGGCGTAGCGCa        >  1:93396/1‑100 (MQ=255)
                                                                                             atttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCa        >  1:2379122/1‑100 (MQ=255)
                                                                                              tttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAt       >  1:2983345‑M2/1‑99 (MQ=255)
                                                                                               ttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtc      >  1:451817‑M2/1‑98 (MQ=255)
                                                                                                tATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtca     <  2:1794448‑M2/100‑4 (MQ=255)
                                                                                                tATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtca     <  2:2066538‑M2/100‑4 (MQ=255)
                                                                                                 aTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcag    <  1:2590395‑M2/100‑5 (MQ=255)
                                                                                                 aTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcag    <  1:2092345‑M2/100‑5 (MQ=255)
                                                                                                   gTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcaggc  <  1:3314083‑M2/100‑7 (MQ=255)
                                                                                                   gTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcaggc  >  1:200119‑M2/1‑94 (MQ=255)
                                                                                                   gTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcaggc  <  2:2106418‑M2/100‑7 (MQ=255)
                                                                                                   |                                                                                                   
AGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGC  >  NC_000913/3650613‑3650811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.