New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3650712 =NA (NA)7 (0.060) 5/164 NT NA noncoding (1/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 3650744 = NA (NA)noncoding (33/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 154 total aligned reads displayed.

GGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTG  >  NC_000913/3650645‑3650843
                                                                                                   |                                                                                                   
ggTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGAcc                                                                                                     <  1:1577439/100‑1 (MQ=255)
 gTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                                                    <  1:373799/100‑1 (MQ=255)
    aGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACa                                                                                                 >  2:1061866/1‑100 (MQ=255)
    aGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACa                                                                                                 >  1:1350707/1‑100 (MQ=255)
    aGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACa                                                                                                 >  2:1354884/1‑100 (MQ=255)
       gcCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAg                                                                                              <  2:2800946/100‑1 (MQ=255)
          tGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTa                                                                                           >  2:2892766/1‑100 (MQ=255)
           gAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTAt                                                                                          <  2:2762834/100‑1 (MQ=255)
              aTAAAGCGGCGATATCCCCCCCACAGGGTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTAt                                                                                          <  2:313350/97‑1 (MQ=255)
                aaaGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGaaaa                                                                                     >  1:1855041/1‑100 (MQ=255)
                 aaGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAAt                                                                                    >  2:2240747/1‑100 (MQ=255)
                    cggcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCg                                                                                 >  2:1369869/1‑100 (MQ=255)
                     ggcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGa                                                                                >  2:2958379/1‑100 (MQ=255)
                      gcgATATCCTCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                                                               <  1:25094/100‑1 (MQ=255)
                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                                                               <  1:302347/100‑1 (MQ=255)
                      gcgATATCCCCCCCACAGGTTGTTAGAAAAATGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                                                               >  1:2205835/1‑100 (MQ=255)
                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                                                              >  2:1126867/1‑100 (MQ=255)
                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                                                              >  1:3271941/1‑100 (MQ=255)
                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                                                              <  1:364185/100‑1 (MQ=255)
                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                                                              >  2:2547671/1‑100 (MQ=255)
                           atCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATa                                                                          >  1:2708997/1‑100 (MQ=255)
                           atCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATa                                                                          <  1:1061863/100‑1 (MQ=255)
                              ccccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTa                                                                       >  2:2102438/1‑100 (MQ=255)
                               cccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTAt                                                                      <  1:588370/100‑1 (MQ=255)
                                ccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATg                                                                     >  2:1566034/1‑100 (MQ=255)
                                 cccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGt                                                                    >  2:3119793/1‑100 (MQ=255)
                                        gttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                                                             <  1:2763414/100‑1 (MQ=255)
                                        gttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                                                             <  1:2164831/100‑1 (MQ=255)
                                        gttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                                                             >  1:132857/1‑100 (MQ=255)
                                        cttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTg                                                              <  1:1470299/98‑1 (MQ=255)
                                         cgatctgAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTa                                                            <  2:2811475/94‑1 (MQ=255)
                                           nttaGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGG                                                          >  1:3172234‑M1/2‑100 (MQ=255)
                                           gTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGG                                                          <  2:178605‑M1/100‑1 (MQ=255)
                                            ttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGC                                                         <  1:1152353‑M1/100‑1 (MQ=255)
                                             tAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCC                                                        <  2:3271967‑M1/100‑1 (MQ=255)
                                              aGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCT                                                       >  1:711832‑M1/1‑100 (MQ=255)
                                              aGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCT                                                       >  1:1438896‑M1/1‑100 (MQ=255)
                                               gAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTaagatcg                                                      >  1:2811451/1‑94 (MQ=255)
                                               gAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTG                                                      <  2:1272828‑M1/100‑1 (MQ=255)
                                               gAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTG                                                      >  1:1089352‑M1/1‑100 (MQ=255)
                                                 aaaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAc                                                    <  1:1144909/100‑1 (MQ=255)
                                                 aaaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAc                                                    <  2:1601354/100‑1 (MQ=255)
                                                   aGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAg                                                  <  1:1729929/100‑1 (MQ=255)
                                                      gcgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCg                                               <  2:649628/100‑1 (MQ=255)
                                                      gcgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCg                                               <  1:3221857/100‑1 (MQ=255)
                                                       cgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGt                                              >  2:350343/1‑100 (MQ=255)
                                                       cgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGt                                              >  2:3167453/1‑100 (MQ=255)
                                                         cTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAg                                            >  2:3332130/1‑100 (MQ=255)
                                                          tttatttaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgc                                           <  1:2882993/100‑1 (MQ=255)
                                                            tatttatGTCGGATGCGACGCTGTCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcgc                                         <  2:1210496/100‑1 (MQ=255)
                                                            tatttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcgc                                         >  1:54688/1‑100 (MQ=255)
                                                            tatttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcgc                                         >  2:2353646/1‑100 (MQ=255)
                                                            tatttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcgc                                         >  2:2080084/1‑100 (MQ=255)
                                                             atttatGTCTGATGCGACGCTGGCGCGTCTTATCCGACTTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCATGACAGGCGTAGCGCa                                        >  1:93396/1‑100 (MQ=255)
                                                             atttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCa                                        >  1:2379122/1‑100 (MQ=255)
                                                             atttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCa                                        >  1:2401075/1‑100 (MQ=255)
                                                              tttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAt                                       <  1:1245323‑M2/100‑2 (MQ=255)
                                                              tttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAt                                       >  1:2983345‑M2/1‑99 (MQ=255)
                                                              tttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAt                                       <  2:159‑M2/100‑2 (MQ=255)
                                                               ttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtc                                      >  1:451817‑M2/1‑98 (MQ=255)
                                                                tATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtca                                     <  2:2066538‑M2/100‑4 (MQ=255)
                                                                tATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtca                                     <  2:1789774‑M2/100‑4 (MQ=255)
                                                                 aTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcag                                    <  1:2590395‑M2/100‑5 (MQ=255)
                                                                 aTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcag                                    <  1:2092345‑M2/100‑5 (MQ=255)
                                                                  ggtcggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAgg                                   >  1:1731839‑M2/34‑100 (MQ=255)
                                                                   gTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcaggc                                  <  2:2106418‑M2/100‑7 (MQ=255)
                                                                    tCGGATGCGACGCTGGCGCGTCTTATGCGACCTACATAGTTATGAAAATTCGATTAATAGTATGTTATTTGTAGGCCTGAtgcgctacgcctgtcaggcc                                 <  1:2507189‑M1/100‑21 (MQ=255)
                                                                    TCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCg                                 <  2:449317‑M1/100‑1 (MQ=255)
                                                                     cggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGa                                >  2:563600‑M2/31‑100 (MQ=255)
                                                                     cGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAtgcgctacgcctgtcaggcct                                <  1:933841‑M1/100‑22 (MQ=255)
                                                                     CGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGa                                <  2:1808587‑M1/100‑1 (MQ=255)
                                                                      ggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                               >  2:2838248‑M2/30‑100 (MQ=255)
                                                                      ggATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAtgcgctacgcctgtcaggccta                               <  1:999261‑M1/100‑23 (MQ=255)
                                                                      GGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                               >  2:2172719‑M1/1‑100 (MQ=255)
                                                                         taagacgcgccagcgtcttatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAtttt                            >  1:1649511‑M2/27‑100 (MQ=255)
                                                                         tGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAtgcgctacgcctgtcaggcctacaa                            <  2:2500890‑M1/100‑26 (MQ=255)
                                                                           cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGc                          <  2:524696/100‑1 (MQ=255)
                                                                           cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGc                          >  2:1819344/1‑100 (MQ=255)
                                                                               gCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAtt                      <  1:3119766/100‑1 (MQ=255)
                                                                                 tGGCGCGTCTTATCCGACCTACAAAGTTATGAATATTCGATGAATAGTATGTTATTTGTAGGTCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTa                    <  1:2837299/100‑1 (MQ=255)
                                                                                  ggCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                   >  1:2820171/1‑100 (MQ=255)
                                                                                  ggCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                   >  2:118072/1‑100 (MQ=255)
                                                                                  ggCGCGTCTTATCAGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                   >  1:2069118/1‑100 (MQ=255)
                                                                                    cgcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTacac                 <  1:856507/100‑1 (MQ=255)
                                                                                    cgcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTacac                 <  2:607677/100‑1 (MQ=255)
                                                                                    cgcgTCTTATCCGACCGACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTacac                 <  1:1961947/100‑1 (MQ=255)
                                                                                     gcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTAcaca                <  2:1604677/100‑1 (MQ=255)
                                                                                     gcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTAcaca                <  1:76273/100‑1 (MQ=255)
                                                                                          ttATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTGCACAGTACt           <  1:1247707/100‑1 (MQ=255)
                                                                                          ttATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACt           >  2:2562602/1‑100 (MQ=255)
                                                                                           natccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTc          >  1:1735649‑M2/9‑100 (MQ=255)
                                                                                             tccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTccc        <  2:2576104‑M2/94‑1 (MQ=255)
                                                                                              ccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCt       >  2:2177688‑M2/6‑100 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTg      >  2:2741715‑M2/5‑100 (MQ=255)
                                                                                                 acCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACCCCCTGCg    >  1:677508‑M2/3‑100 (MQ=255)
                                                                                                   cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg  >  1:3272589/1‑100 (MQ=255)
                                                                                                   cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg  <  2:2372599/100‑1 (MQ=255)
                                                                                                   cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg  <  1:2931011/100‑1 (MQ=255)
                                                                                                   cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg  <  1:2930924/100‑1 (MQ=255)
                                                                                                   cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg  <  2:1560352/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTG  >  NC_000913/3650645‑3650843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.