New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4229380 =NA (NA)7 (0.060) 5/164 NT NA noncoding (5/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4229413 = NA (NA)noncoding (38/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 151 total aligned reads displayed.

GCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCG  >  NC_000913/4229281‑4229478
                                                                                                   |                                                                                                   
cttatgtgtttaaggctggtgaagaagcggttccgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtg                                                                                                     >  1:2150243‑M1/100‑100 (MQ=255)
cttatgtgtttaaggctggtgaagaagcggttccgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtg                                                                                                     >  2:889447‑M1/100‑100 (MQ=255)
 ttatgtgtttaaggctggtgaagaagcggttccgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGc                                                                                                    >  2:2875633‑M1/99‑100 (MQ=255)
   ccTGAACTCGCTGTTGTGTTCGGTGGCTTACAGTGTGCTGGAACAGCAGGATGAAGATGAAGGACGGGACGAGTATTAATATTGCGAATAATGTAGGcc                                                                                                   >  1:2656191/1‑99 (MQ=255)
    cTGAACTTGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTg                                                                                                 <  1:1143974/100‑1 (MQ=255)
    cTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTg                                                                                                 <  2:1450590/100‑1 (MQ=255)
    cTGAACTCGCTGGTTTGTTCGGTGGCTTACAGTGTGCTGGGACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCt                                                                                                  >  1:1222591/1‑99 (MQ=255)
      gAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAt                                                                                               <  2:1823878/100‑1 (MQ=255)
       aaCTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATa                                                                                              <  2:2422953/100‑1 (MQ=255)
           cGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAc                                                                                          >  1:1835100/1‑100 (MQ=255)
            gCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAcg                                                                                         <  2:71362/100‑1 (MQ=255)
            gCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAcg                                                                                         <  2:903512/100‑1 (MQ=255)
            gCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAcg                                                                                         <  1:2091790/100‑1 (MQ=255)
              tGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAcgcg                                                                                       <  1:2933916/100‑1 (MQ=255)
               gTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGt                                                                                      >  1:3281951/1‑100 (MQ=255)
                ttttGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTc                                                                                     >  2:1673677/1‑100 (MQ=255)
                ttttGTTCGGTGGCTTACAGTGTGCGGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAAGCCTGTAGGCCTGATAAGACGCGTc                                                                                     <  1:1183953/100‑1 (MQ=255)
                 tttGTTCGGTGGCTTACAGGGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCa                                                                                    <  1:1621876/100‑1 (MQ=255)
                     ttCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCg                                                                                >  2:3067735/1‑100 (MQ=255)
                      tCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGt                                                                               <  1:2814098/100‑1 (MQ=255)
                       cGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTc                                                                              <  1:2991618/100‑1 (MQ=255)
                        ggTGGCTTACAGTGTGCTGGAACAGCTGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTATTCCTGATAAGACGCGTCAAGCGTCg                                                                             <  1:1045371/100‑1 (MQ=255)
                        ggTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCg                                                                             <  1:402240/100‑1 (MQ=255)
                         gTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGc                                                                            >  2:2292051/1‑100 (MQ=255)
                          tGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCa                                                                           <  2:1793434/100‑1 (MQ=255)
                           ggCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCAt                                                                          <  1:3187469/100‑1 (MQ=255)
                               tccgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAgg                                                                      >  2:719981‑M1/69‑100 (MQ=255)
                               tACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAgg                                                                      <  1:1977988/100‑1 (MQ=255)
                                ccgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCCGATAAGACGCGTCAAGCGTCGCATCAGGc                                                                     >  2:2201680‑M1/68‑100 (MQ=255)
                                  gctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                   >  1:1319826‑M1/66‑100 (MQ=255)
                                  aGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                   <  1:1016115/100‑1 (MQ=255)
                                   gtgtGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACt                                                                  >  1:1787231/1‑100 (MQ=255)
                                     gtgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                >  2:3106268/1‑100 (MQ=255)
                                     ggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                >  2:1521944‑M1/63‑100 (MQ=255)
                                      tgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                               >  2:1481198/1‑100 (MQ=255)
                                      tgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                               <  2:2300820/100‑1 (MQ=255)
                                         gctggtcaccgtttttaagtgaagtgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAAc                                                            >  2:160287‑M1/59‑100 (MQ=255)
                                           gAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAAc                                                            <  1:542208/98‑1 (MQ=255)
                                            aaCAGCTGGATGAAGATGCAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGGCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAg                                                         <  2:1331413/100‑1 (MQ=255)
                                            aaCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAg                                                         >  1:3068275/1‑100 (MQ=255)
                                            aaCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAg                                                         >  1:1226304/1‑100 (MQ=255)
                                            aaCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAg                                                         >  1:622040/1‑100 (MQ=255)
                                            aaCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAg                                                         <  2:2178845/100‑1 (MQ=255)
                                             aCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGa                                                        <  1:1481192/100‑1 (MQ=255)
                                             aCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGa                                                        <  1:2229120/100‑1 (MQ=255)
                                              cAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGAt                                                       <  2:2708603/100‑1 (MQ=255)
                                                gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                     >  2:249596/1‑100 (MQ=255)
                                                 ccGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGcc                                                    <  2:1950493/100‑1 (MQ=255)
                                                   ggATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCgg                                                  >  2:2462598/1‑100 (MQ=255)
                                                   ggATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCgg                                                  >  2:2013427/1‑100 (MQ=255)
                                                    gatgaagatgaaGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGa                                                 <  1:2112715/100‑1 (MQ=255)
                                                     atgaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAt                                                <  1:656732/100‑1 (MQ=255)
                                                     atgaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAt                                                <  1:656491/100‑1 (MQ=255)
                                                      tgaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATc                                              >  2:2578264/1‑100 (MQ=255)
                                                      tgaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATc                                              <  2:2874241/100‑1 (MQ=255)
                                                      tgaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATc                                              >  2:363356/1‑100 (MQ=255)
                                                       gaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCa                                             <  1:1691026/100‑1 (MQ=255)
                                                        aatatgaagTAGTGGACTTGTATTAAGATTTTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCAt                                            <  2:614831/97‑1 (MQ=21)
                                                        aagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCAt                                            <  1:926903/100‑1 (MQ=255)
                                                         aggtgaagGACCGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCa                                             <  1:1203743/95‑1 (MQ=255)
                                                         agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATg                                           >  2:3078932/1‑100 (MQ=255)
                                                         agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATg                                           <  2:1676757/100‑1 (MQ=255)
                                                            tgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCAt                                        >  2:2147393/1‑100 (MQ=255)
                                                             gaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATc                                       <  2:1760978/100‑1 (MQ=255)
                                                               agGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCg                                     >  1:2573572/1‑100 (MQ=255)
                                                                ggacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCGTCCgg                                    >  1:2298053/1‑100 (MQ=255)
                                                                ggacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCgg                                    >  2:2090749/1‑100 (MQ=255)
                                                                ggacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCgg                                    >  1:957575/1‑100 (MQ=255)
                                                                 gacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGc                                   <  2:3167500/100‑1 (MQ=255)
                                                                   cgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCaa                                 >  1:745895/1‑100 (MQ=255)
                                                                   cggaacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCaa                                 <  2:1365681/100‑1 (MQ=255)
                                                                      gacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTc                              <  2:208857/100‑1 (MQ=255)
                                                                        cgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATGATCCGGCatcttgt                            <  1:1640683/100‑7 (MQ=21)
                                                                        cgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCAc                            <  2:1979999/100‑1 (MQ=255)
                                                                        cgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCAc                            <  1:1192066/100‑1 (MQ=255)
                                                                        cgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCAc                            <  2:2416080/100‑1 (MQ=255)
                                                                         gAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACt                           <  1:581588/100‑1 (MQ=255)
                                                                         gAGTATTAATATTGTGAATCCTGTAGACCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACt                           <  2:545459/100‑1 (MQ=255)
                                                                            tATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTaa                        <  2:957578/100‑1 (MQ=255)
                                                                             aTTAAGAGTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTaa                        <  1:2559916/99‑1 (MQ=255)
                                                                              ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCNTCAGNCANTATGNACANGATGCCGGATCATGCATCCGGCAATTCACTTaan                       <  2:1322280/99‑2 (MQ=255)
                                                                              ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTaaaa                      >  2:1141961/1‑100 (MQ=255)
                                                                              ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTaaaa                      <  1:2097295/100‑1 (MQ=255)
                                                                              ttAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTAACTTaaaa                      >  1:3072095/1‑100 (MQ=255)
                                                                               tAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTaaaaa                     >  1:1876127/1‑100 (MQ=255)
                                                                                aaTATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAAc                    <  1:736136/100‑1 (MQ=255)
                                                                                 atatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGCTGCCGGATCATGCATCCGGCAATTCACTTAAAAACg                   >  1:1662677/1‑100 (MQ=255)
                                                                                  tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACgg                  <  1:153438/100‑1 (MQ=255)
                                                                                   atTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACgat                 <  2:2265713/100‑3 (MQ=255)
                                                                                   atTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGt                 >  1:551893/1‑100 (MQ=255)
                                                                                   atTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGt                 >  1:1281460/1‑100 (MQ=255)
                                                                                    ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCTTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACgg                  <  1:888216/98‑1 (MQ=255)
                                                                                      gtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGAc              >  2:323986/1‑100 (MQ=255)
                                                                                       tgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGAcc             <  1:363356/100‑1 (MQ=255)
                                                                                       tgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGAcc             <  1:2607596/100‑1 (MQ=255)
                                                                                        gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCa            >  2:150778/1‑100 (MQ=255)
                                                                                              tGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTcc      <  2:1642135/100‑1 (MQ=255)
                                                                                               gTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCa     >  1:2799652/1‑100 (MQ=255)
                                                                                               gTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCa     >  2:1522601/1‑100 (MQ=255)
                                                                                                  ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg  <  2:1222595/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCG  >  NC_000913/4229281‑4229478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.