New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4592992 =126 (1.020)6 (0.050) 4/170 NT 5.1% coding (1336/1656 nt) tsr methyl‑accepting chemotaxis protein I, serine sensor receptor
?NC_000913 4593015 = 105 (0.890)coding (1359/1656 nt) tsr methyl‑accepting chemotaxis protein I, serine sensor receptor
Rejected: Frequency below cutoff threshold.

Only 100 of 152 total aligned reads displayed.

GCGGCTCGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTG  >  NC_000913/4592893‑4593091
                                                                                                   |                                                                                                   
tgttgagttacccggtccatctcagcaaccgctaagccaacctgatcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccg                                                                                                     >  1:3198176‑M1/100‑100 (MQ=255)
tgttgagttacccggtccatctcagcaaccgctaagccaacctgatcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccg                                                                                                     <  2:761464‑M1/1‑1 (MQ=255)
gcggcTCGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTg                                                                                                     <  1:1043094/100‑1 (MQ=255)
 cggcTCGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGt                                                                                                    >  1:2463327/1‑100 (MQ=255)
   tgagttacccggtccatctcagcaaccgctaagccaacctgatcgataccacggctctgcgcatcagaagcagaagcaatttcgcccataatgtccGTCa                                                                                                  <  1:2857307‑M1/4‑1 (MQ=255)
   gcTCGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCa                                                                                                  <  1:1999804/100‑1 (MQ=255)
    cTCGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAg                                                                                                 >  1:2981133/1‑100 (MQ=255)
      cGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAgcg                                                                                               <  2:857043/100‑1 (MQ=255)
      cGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAgcg                                                                                               <  1:397844/100‑1 (MQ=255)
         gAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCg                                                                                            <  2:2346650/100‑1 (MQ=255)
           aaTTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTg                                                                                          <  2:1072348/100‑1 (MQ=255)
            aTTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGa                                                                                         >  2:1311329/1‑100 (MQ=255)
              tAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGAcc                                                                                       >  2:1386557/1‑100 (MQ=255)
              tAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGAcc                                                                                       >  1:3097198/1‑100 (MQ=255)
                  aGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCcgcg                                                                                   <  2:27020/100‑1 (MQ=255)
                    ccTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTg                                                                                 <  2:1893952/100‑1 (MQ=255)
                    ccTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTg                                                                                 <  1:881323/100‑1 (MQ=255)
                    ccTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTg                                                                                 >  1:269182/1‑100 (MQ=255)
                     cTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGa                                                                                >  2:3323138/1‑100 (MQ=255)
                     cTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGa                                                                                <  2:1181677/100‑1 (MQ=255)
                      tGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGAc                                                                               >  1:563409/1‑100 (MQ=255)
                      tGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGAc                                                                               <  1:2265168/100‑1 (MQ=255)
                       gATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACg                                                                              >  1:3143396/1‑100 (MQ=255)
                       agcaaccgctaagcgaacctggtcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccGTCAGCGCCGTGACCCGCGTGACg                                                                              >  2:1112076‑M1/77‑100 (MQ=255)
                         caaccgctaagccaacctgatcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccGTCAGCGCCGTGACCCGCGTGACGGa                                                                            >  1:1231694‑M1/75‑100 (MQ=255)
                           gAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACa                                                                          >  1:287880/1‑100 (MQ=255)
                           gAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACa                                                                          <  2:1105483/100‑1 (MQ=255)
                           gAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACa                                                                          >  1:2084123/1‑100 (MQ=255)
                           accgctaagccaacctgatcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccGTCAGCGCCGTGACCCGCGTGACGGACa                                                                          >  2:2665744‑M1/73‑100 (MQ=255)
                               aCTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTAt                                                                      >  2:2461145/1‑100 (MQ=255)
                                cTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATg                                                                     >  1:3298946/1‑100 (MQ=255)
                                cTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATg                                                                     >  2:2144685/1‑100 (MQ=255)
                                cTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATg                                                                     >  2:2854430/1‑100 (MQ=255)
                                cTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATg                                                                     >  2:1744972/1‑100 (MQ=255)
                                 tCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATgg                                                                    <  2:2407942/100‑1 (MQ=255)
                                  cGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATggg                                                                   >  2:648299/1‑100 (MQ=255)
                                   ggTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGc                                                                  <  2:557317/100‑1 (MQ=255)
                                   ggTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGc                                                                  >  2:2239997/1‑100 (MQ=255)
                                   ggTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGc                                                                  <  2:89181/100‑1 (MQ=255)
                                   ggTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGc                                                                  <  1:1702469/100‑1 (MQ=255)
                                      ggggAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGaa                                                               >  2:3167584/1‑100 (MQ=255)
                                         gAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGCAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAAtt                                                            >  1:1828519/1‑100 (MQ=255)
                                           aaGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgc                                                          >  2:2551620/1‑100 (MQ=255)
                                           aaGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATAGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgc                                                          >  2:1669823/1‑100 (MQ=255)
                                            aGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgct                                                         <  2:2084138/100‑1 (MQ=255)
                                            aGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgct                                                         <  1:1687115/100‑1 (MQ=255)
                                            aGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgct                                                         <  2:1828530/100‑1 (MQ=255)
                                            aGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgct                                                         >  1:2954520/1‑100 (MQ=255)
                                              tGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttc                                                       <  2:3047685/100‑1 (MQ=255)
                                              tGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttc                                                       >  2:1931872/1‑100 (MQ=255)
                                               ggATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttct                                                      <  1:213782/100‑1 (MQ=255)
                                               ggATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttct                                                      <  1:417407/100‑1 (MQ=255)
                                               ggATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttc                                                       <  1:2053711/99‑1 (MQ=255)
                                                  tGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttctgct                                                   >  2:1424472/1‑100 (MQ=255)
                                                  tGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttctgct                                                   <  1:2530159/100‑1 (MQ=255)
                                                   gTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttctgctt                                                  >  1:658455/1‑100 (MQ=255)
                                                     tGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTgcttctgcttct                                                <  2:435086/100‑1 (MQ=255)
                                                     tGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTgcttctgcttct                                                <  2:320753/100‑1 (MQ=255)
                                                     tGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTgcttctgcttct                                                <  1:114877/100‑1 (MQ=255)
                                                       gCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtga                                              <  2:286471/100‑1 (MQ=255)
                                                          ctACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGTGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtgatga                                           >  1:761462/1‑100 (MQ=255)
                                                          ctACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtgatg                                            >  1:2842475/1‑99 (MQ=255)
                                                             cGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCa                                        <  1:1026295/100‑1 (MQ=255)
                                                              gCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCag                                       >  1:1599889/1‑100 (MQ=255)
                                                              gCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCag                                       <  1:18641/100‑1 (MQ=255)
                                                                 ggTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGc                                    >  2:610876/1‑100 (MQ=255)
                                                                  gTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGcc                                   >  2:241774/1‑100 (MQ=255)
                                                                   tCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCg                                  >  2:351730/1‑100 (MQ=255)
                                                                   tCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCg                                  <  1:1360846/100‑1 (MQ=255)
                                                                   tCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCg                                  >  1:3306472/1‑100 (MQ=255)
                                                                    cGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCg                                  >  1:2660149/1‑99 (MQ=255)
                                                                    cGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGt                                 <  1:3222451/100‑1 (MQ=255)
                                                                    cGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGt                                 >  1:2383054/1‑100 (MQ=255)
                                                                      aaaGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTgg                               <  2:396808/100‑1 (MQ=255)
                                                                       aaGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGt                              <  2:80738/100‑1 (MQ=255)
                                                                       aaGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGt                              <  2:569963/100‑1 (MQ=255)
                                                                          cgcCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATc                           <  2:358071/100‑1 (MQ=255)
                                                                          cgcCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATc                           <  2:1370716/100‑1 (MQ=255)
                                                                            ccGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGa                         >  1:1269217/1‑100 (MQ=255)
                                                                            ccGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGa                         <  2:1718462/100‑1 (MQ=255)
                                                                               gggAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCa                      <  1:1311325/100‑1 (MQ=255)
                                                                                 gAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAgg                    >  1:2833148/1‑100 (MQ=255)
                                                                                  aaaCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGTACATTATGGGCGAAATTGCGTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGt                   >  1:1827792/1‑100 (MQ=255)
                                                                                  aaaCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGt                   >  1:1872738/1‑100 (MQ=255)
                                                                                   aaCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGtt                  <  1:2631817/100‑1 (MQ=255)
                                                                                   aaCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGtt                  <  1:2473419/100‑1 (MQ=255)
                                                                                    aCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTg                 <  1:2763240/100‑1 (MQ=255)
                                                                                    aCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTg                 <  2:2074530/100‑1 (MQ=255)
                                                                                     cAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTgg                >  2:1054591/1‑100 (MQ=255)
                                                                                      aaTGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGc               <  2:2611298/100‑1 (MQ=255)
                                                                                        tGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCtt             >  2:1837035/1‑100 (MQ=255)
                                                                                           cGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGc          >  1:3277723/1‑100 (MQ=255)
                                                                                           cGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGc          <  2:2575636/100‑1 (MQ=255)
                                                                                            ggAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGc          <  1:3106540/99‑1 (MQ=255)
                                                                                            ggAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCg         >  2:667491/1‑100 (MQ=255)
                                                                                                 ttGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGc    <  1:565306/100‑1 (MQ=255)
                                                                                                  tGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCt   <  2:2610269/100‑1 (MQ=255)
                                                                                                   GTCAGCGCCGTGACCCGCGTGACGGACATTATGGTCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTg  >  1:1769739‑M1/1‑100 (MQ=255)
                                                                                                   GTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTg  <  1:1728434‑M1/100‑1 (MQ=255)
                                                                                                   GTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTg  <  2:2150346‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCGGCTCGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTG  >  NC_000913/4592893‑4593091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.