New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4592992 =126 (1.020)6 (0.050) 4/170 NT 5.1% coding (1336/1656 nt) tsr methyl‑accepting chemotaxis protein I, serine sensor receptor
?NC_000913 4593015 = 105 (0.890)coding (1359/1656 nt) tsr methyl‑accepting chemotaxis protein I, serine sensor receptor
Rejected: Frequency below cutoff threshold.

Only 100 of 145 total aligned reads displayed.

GATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAG  >  NC_000913/4592916‑4593114
                                                                                                   |                                                                                                   
gATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACg                                                                                                     >  1:3143396/1‑100 (MQ=255)
agcaaccgctaagcgaacctggtcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccGTCAGCGCCGTGACCCGCGTGACg                                                                                                     >  2:1112076‑M1/77‑100 (MQ=255)
 aTTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACgg                                                                                                    <  2:3174367/100‑1 (MQ=255)
  ttGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGa                                                                                                   <  1:2213066/100‑1 (MQ=255)
  caaccgctaagccaacctgatcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccGTCAGCGCCGTGACCCGCGTGACGGa                                                                                                   >  1:1231694‑M1/75‑100 (MQ=255)
   tGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGAc                                                                                                  <  2:364329/100‑1 (MQ=255)
    gAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACa                                                                                                 >  1:2084123/1‑100 (MQ=255)
    gAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACa                                                                                                 >  1:287880/1‑100 (MQ=255)
    accgctaagccaacctgatcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccGTCAGCGCCGTGACCCGCGTGACGGACa                                                                                                 >  2:2044391‑M1/73‑100 (MQ=255)
    accgctaagccaacctgatcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccGTCAGCGCCGTGACCCGCGTGACGGACa                                                                                                 >  1:1773254‑M1/73‑100 (MQ=255)
      cgctaagccaacctgatcgataccacggctctgctcatcagaagcagaagcaatttcgcccataatgtccGTCAGCGCCGTGACCCGCGTGACGGACAtt                                                                                               >  2:660210‑M1/71‑100 (MQ=255)
      aGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACAtt                                                                                               <  2:2456487/100‑1 (MQ=255)
      aGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACAtt                                                                                               >  1:1077912/1‑100 (MQ=255)
        aCTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTAt                                                                                             >  2:2461145/1‑100 (MQ=255)
         cTCGGTGGTCAAAGTATCTGTTGACTATACGCTCGTCGATAGCGCCGGGGAAACAATGAAAGAAAATGTCAACGCCGTGACCCGCGTGACGGACATTAt                                                                                             >  1:861397/1‑99 (MQ=12)
         cTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATg                                                                                            >  2:1744972/1‑100 (MQ=255)
         cTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATg                                                                                            >  2:2144685/1‑100 (MQ=255)
          tCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATgg                                                                                           <  2:2407942/100‑1 (MQ=255)
           cGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATggg                                                                                          >  2:648299/1‑100 (MQ=255)
            ggTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGc                                                                                         <  2:557317/100‑1 (MQ=255)
            ggTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGc                                                                                         >  2:2239997/1‑100 (MQ=255)
            ggTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGc                                                                                         <  1:1702469/100‑1 (MQ=255)
            ggTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGc                                                                                         <  2:89181/100‑1 (MQ=255)
              tGGGGAAAGTGGATGTTGGCTCTACGCGGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGa                                                                                       <  1:2498937/100‑1 (MQ=255)
               ggggAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGaa                                                                                      >  2:2763263/1‑100 (MQ=255)
               ggggAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGaa                                                                                      >  2:3167584/1‑100 (MQ=255)
                 ggAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAAt                                                                                    >  2:2094718/1‑100 (MQ=255)
                  gAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGCAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAAtt                                                                                   >  1:1828519/1‑100 (MQ=255)
                     aGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgct                                                                                <  1:1687115/100‑1 (MQ=255)
                       tGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttc                                                                              <  2:791598/100‑1 (MQ=255)
                        ggATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttct                                                                             <  1:417407/100‑1 (MQ=255)
                        ggATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttc                                                                              <  1:2053711/99‑1 (MQ=255)
                           tGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttctgct                                                                          <  1:2530159/100‑1 (MQ=255)
                           tGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATtgcttctgct                                                                          >  2:1424472/1‑100 (MQ=255)
                              tGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTgcttctgcttct                                                                       >  2:2905566/1‑100 (MQ=255)
                              tGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTgcttctgcttct                                                                       <  1:1706868/100‑1 (MQ=255)
                                gCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtga                                                                     <  2:1780445/100‑1 (MQ=255)
                                gCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtga                                                                     <  2:286471/100‑1 (MQ=255)
                                gCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtga                                                                     >  1:600623/1‑100 (MQ=255)
                                gCTCGACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtga                                                                     <  2:901704/100‑1 (MQ=255)
                                   ctACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGTGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtgatga                                                                  >  1:761462/1‑100 (MQ=255)
                                   ctACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtgatga                                                                  >  2:1342645/1‑100 (MQ=255)
                                   ctACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCtgatg                                                                   >  1:2842475/1‑99 (MQ=255)
                                      cGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCa                                                               <  1:1026295/100‑1 (MQ=255)
                                       gCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCag                                                              <  1:18641/100‑1 (MQ=255)
                                        cTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCaga                                                             <  1:2461126/100‑1 (MQ=255)
                                            tCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCg                                                         >  1:3306472/1‑100 (MQ=255)
                                            tCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCg                                                         <  1:1360846/100‑1 (MQ=255)
                                            tCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCg                                                         >  2:351730/1‑100 (MQ=255)
                                             cGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCg                                                         >  1:2660149/1‑99 (MQ=255)
                                             cGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGt                                                        <  1:3222451/100‑1 (MQ=255)
                                               aaaGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTgg                                                      <  2:2383072/100‑1 (MQ=255)
                                               aaaGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTgg                                                      <  2:396808/100‑1 (MQ=255)
                                                aaGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGt                                                     <  2:80738/100‑1 (MQ=255)
                                                     ccGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGa                                                >  1:1269217/1‑100 (MQ=255)
                                                        gggAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCa                                             <  2:1692910/100‑1 (MQ=255)
                                                        gggAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCa                                             <  1:1311325/100‑1 (MQ=255)
                                                          gAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAgg                                           >  1:2833148/1‑100 (MQ=255)
                                                           aaaCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGTACATTATGGGCGAAATTGCGTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGt                                          >  1:1827792/1‑100 (MQ=255)
                                                           aaaCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGt                                          >  1:1872738/1‑100 (MQ=255)
                                                            aaCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGtt                                         <  1:2631817/100‑1 (MQ=255)
                                                             aCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTg                                        <  1:2763240/100‑1 (MQ=255)
                                                             aCAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTg                                        <  2:2074530/100‑1 (MQ=255)
                                                              cAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTgg                                       >  2:1054591/1‑100 (MQ=255)
                                                               aaTGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGc                                      <  2:2611298/100‑1 (MQ=255)
                                                                aTGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCt                                     <  2:2580607/100‑1 (MQ=255)
                                                                 tGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCtt                                    >  2:1837035/1‑100 (MQ=255)
                                                                   gCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAg                                  >  1:370270/1‑100 (MQ=255)
                                                                    cGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGc                                 <  2:2575636/100‑1 (MQ=255)
                                                                    cGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGc                                 >  1:3277723/1‑100 (MQ=255)
                                                                     ggAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGc                                 <  1:3106540/99‑1 (MQ=255)
                                                                     ggAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCg                                >  2:667491/1‑100 (MQ=255)
                                                                       tgtccgtcacgcgggtcacggcgctgacGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGt                              >  2:2044391‑M2/29‑100 (MQ=255)
                                                                       tgtccgtcacgcgggtcacggcgctgacGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGt                              >  2:2665744‑M2/29‑100 (MQ=255)
                                                                         tccgtcacgcgggtcacggcgctgacGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTg                            >  1:1231694‑M2/27‑100 (MQ=255)
                                                                         aTTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTg                            <  2:59923/100‑1 (MQ=255)
                                                                          ttGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGc                           <  2:2463346/100‑1 (MQ=255)
                                                                           cgtcacgcgggtcacggcgctgacGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGACCAGGTTCGCTTAGCGGTTGCt                          >  2:1112076‑M2/25‑100 (MQ=255)
                                                                            GTCAGCGCCGTGACCCGCGTGACGGACATTATGGTCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTg                         >  1:1769739‑M1/1‑100 (MQ=255)
                                                                            GTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTg                         >  2:2209176‑M1/1‑100 (MQ=255)
                                                                            GTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTg                         <  2:335063‑M1/100‑1 (MQ=255)
                                                                             TCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTga                        >  2:608726‑M1/1‑100 (MQ=255)
                                                                                      tGACCCGCGTGACGGACATTATAGGCGAAATTGCTTCGGCTTCTGATTAGCAGAGCCGTGGCATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCg               <  1:2262662/100‑1 (MQ=37)
                                                                                        aCCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCggg             <  1:1342641/100‑1 (MQ=255)
                                                                                        aCCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCggg             <  1:3011373/100‑1 (MQ=255)
                                                                                         cccGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGt            >  2:594032/1‑100 (MQ=255)
                                                                                         cccGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGt            <  2:554124/100‑1 (MQ=255)
                                                                                         cccGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGt            <  2:1854339/100‑1 (MQ=255)
                                                                                          ccGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCggg             <  2:1667/98‑1 (MQ=255)
                                                                                          ccGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTa           <  2:1671289/100‑1 (MQ=255)
                                                                                           cgcgTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCggggag          >  1:1033720/1‑97 (MQ=255)
                                                                                            gcgTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAAc         <  1:2221992/100‑1 (MQ=255)
                                                                                            gcgTGACGCACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAAc         <  2:2660172/100‑1 (MQ=255)
                                                                                             cgTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACt        <  2:701490/100‑1 (MQ=255)
                                                                                               tgacGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGCGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCa      <  1:2857307‑M2/96‑1 (MQ=255)
                                                                                               tgacGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCa      <  2:1077915‑M2/96‑1 (MQ=255)
                                                                                                  cGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACa   >  1:3198176‑M2/2‑100 (MQ=255)
                                                                                                   ggACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAg  <  1:648299/100‑1 (MQ=255)
                                                                                                   ggACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAg  <  1:2395008/100‑1 (MQ=255)
                                                                                                   ggACATTATGGACGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAg  <  2:3097225/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAG  >  NC_000913/4592916‑4593114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.