BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 346823	NA (NA)	3 (0.030)	3/168	NT	NA	intergenic (+64/+34)	yahO/prpR	periplasmic protein, function unknown, YhcN family/propionate catabolism operon regulatory protein
*	?	NC_000913	= 346853	NA (NA)	3 (0.030)	3/168	NT	NA	noncoding (30/30 nt)	REP24 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP24 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 139 total aligned reads displayed.

ATCCACGGCACGGCAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTT  >  NC_000913/346724‑346922

aTCCACGGCACGGCAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTAT                                                                                                     <  2:1825430‑M1/100‑1 (MQ=255)

    acggcacggcAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATgccg                                                                                                 <  2:2376835‑M1/100‑5 (MQ=255)

      ggcacggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGa                                                                                               <  2:2441533/100‑1 (MQ=255)

      ggcacggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGa                                                                                               >  2:1067368/1‑100 (MQ=255)

      ggcacggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGa                                                                                               >  1:69654/1‑100 (MQ=255)

        cacggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATa                                                                                             <  2:1900629/100‑1 (MQ=255)

         acggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATaa                                                                                            <  1:471719/100‑1 (MQ=255)

         acggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATaa                                                                                            >  1:931887/1‑100 (MQ=255)

          cggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATaaa                                                                                           >  2:2013286/1‑100 (MQ=255)

          cggcaAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATaaa                                                                                           >  2:3103339/1‑100 (MQ=255)

            gcaAATATTTATAAGAAGTAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTCATCGGAGATCATCTATTGAAATTTATGCCGGATgaa                                                                                           >  1:209014/1‑98 (MQ=255)

                 tatTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcg                                                                                    <  1:412959/100‑1 (MQ=255)

                 tatGTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcg                                                                                    <  2:2139792/100‑1 (MQ=255)

                  atTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcgc                                                                                   <  2:838175/100‑1 (MQ=255)

                  atTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcgc                                                                                   >  1:3011383/1‑100 (MQ=255)

                   tttATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcgcg                                                                                  >  1:1173363/1‑100 (MQ=255)

                   tttATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcgcg                                                                                  <  1:3215025/100‑1 (MQ=255)

                   tttATAAGAAGAAGTAATTCTGAATCCTATGTAAACAGCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTcgcg                                                                                  <  1:2437212/100‑1 (MQ=255)

                    ttATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCgcgc                                                                                 <  1:914338/100‑1 (MQ=255)

                    ttATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTAAGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCgcgc                                                                                 >  1:742627/1‑100 (MQ=255)

                     tataAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCt                                                                                >  2:138698/1‑100 (MQ=255)

                     tataAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCt                                                                                <  1:3985/100‑1 (MQ=255)

                      ataAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTg                                                                               <  1:2713810/100‑1 (MQ=255)

                       taAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTGTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGc                                                                              <  1:622370/100‑1 (MQ=255)

                         agaagaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCAt                                                                            >  2:1425417/1‑100 (MQ=255)

                         agaagaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCAt                                                                            <  2:551/100‑1 (MQ=255)

                         agaagaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCAt                                                                            >  2:1438152/1‑100 (MQ=255)

                         agaagaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCAt                                                                            >  1:185606/1‑100 (MQ=255)

                          gaagaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCAtt                                                                           >  2:2276452/1‑100 (MQ=255)

                             gaagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGG                                                                        <  2:2476597‑M2/100‑1 (MQ=255)

                              aagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGC                                                                       >  2:1856134‑M2/1‑100 (MQ=255)

                               agTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCa                                                                      <  1:2833143‑M2/100‑2 (MQ=255)

                               agTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCa                                                                      <  2:437090‑M2/100‑2 (MQ=255)

                                gTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAg                                                                     >  1:840014/1‑100 (MQ=255)

                                gTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAg                                                                     <  2:2637085/100‑1 (MQ=255)

                                  aaTTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGtt                                                                   >  1:1451061/1‑100 (MQ=255)

                                  aaTTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGtt                                                                   >  1:1354365/1‑100 (MQ=255)

                                  aaTTCTGAATCCTATGTAAACATCTCCGATGCATAAGTTTATCGGCGATCATCTATTGCAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAg                                                                     >  1:2836924/1‑98 (MQ=255)

                                   aTTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTc                                                                  >  1:3181292/1‑100 (MQ=255)

                                    ttCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCa                                                                 <  1:514612/100‑1 (MQ=255)

                                    ttCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCa                                                                 <  1:1859887/100‑1 (MQ=255)

                                     tCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATgccgaatgcagcgcgaacgctttatccggcataaatt                                                                <  2:388945‑M1/100‑38 (MQ=255)

                                     tCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGCATAAAGCGTTCGCGCTGCATTCGGCAGTTCAg                                                                >  1:2620329/1‑100 (MQ=255)

                                       tGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCt                                                              <  1:2753994/100‑1 (MQ=255)

                                       tGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCt                                                              >  1:2403731/1‑100 (MQ=255)

                                         aaTCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATgccgaatgcagcgcgaacgctttatccggcataaatttcaa                                                            <  2:48070‑M1/100‑42 (MQ=255)

                                         aaTCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATGAAGCGTTCGCGCTGCATTCGGCAGTTCAGCttt                                                            <  2:3267370/100‑1 (MQ=255)

                                          aTCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCtttt                                                           >  1:1905256/1‑100 (MQ=255)

                                          aTCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCACTGCATTCGGCAGTTCAGCtttt                                                           <  1:1502063/100‑1 (MQ=255)

                                           tCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTc                                                          <  2:333058/100‑1 (MQ=255)

                                            ccTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCa                                                         <  2:2007849/100‑1 (MQ=255)

                                             cTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAg                                                        >  2:2707478/1‑100 (MQ=255)

                                             cTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAg                                                        >  2:2710354/1‑100 (MQ=255)

                                             cTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAg                                                        <  2:1844802/100‑1 (MQ=255)

                                             cTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAg                                                        >  2:3216827/1‑100 (MQ=255)

                                              tATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgc                                                       <  2:217995/100‑1 (MQ=255)

                                                   aaaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccg                                                  >  2:3026625/1‑100 (MQ=255)

                                                   aaaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccg                                                  <  1:1663168/100‑1 (MQ=255)

                                                   aaaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgcc                                                   <  1:3016107/99‑1 (MQ=255)

                                                    aaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgc                                                 >  2:2079632/1‑100 (MQ=255)

                                                     aCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgcc                                                >  1:3068873/1‑100 (MQ=255)

                                                     aCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgcc                                                >  1:2276551/1‑100 (MQ=255)

                                                       aTCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAg                                              >  1:1700423/1‑100 (MQ=255)

                                                          tcCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAc                                           <  2:1126451/100‑1 (MQ=255)

                                                          tcCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAc                                           <  2:2615232/100‑1 (MQ=255)

                                                          tcCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAc                                           <  2:1542439/100‑1 (MQ=255)

                                                          tcCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTGATGCCGGATAAAGCGTTCTCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAc                                           <  2:1953269/100‑1 (MQ=255)

                                                           ccGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcg                                          >  2:3057897/1‑100 (MQ=255)

                                                             gATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtc                                        <  2:2819824/100‑1 (MQ=255)

                                                             gATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtc                                        >  1:945748/1‑100 (MQ=255)

                                                              aTGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtcg                                       <  1:31157/100‑1 (MQ=255)

                                                               tGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtcgt                                      <  1:138697/100‑1 (MQ=255)

                                                                 cGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTcc                                    <  2:35910/100‑1 (MQ=255)

                                                                    aaGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGc                                 <  2:2701657/100‑1 (MQ=255)

                                                                     aGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCt                                <  2:470605/100‑1 (MQ=255)

                                                                            cGGTGATCATCTATTGAAATTTATACCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAAGACGTCCGGCTGATGCCt                         >  1:1311551/1‑100 (MQ=255)

                                                                             ggTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTa                        >  1:1907750/1‑100 (MQ=255)

                                                                               tGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGCCCGGCTGATGCCTaaa                      >  1:3114086/1‑100 (MQ=255)

                                                                                gATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaat                     <  2:945751/100‑1 (MQ=255)

                                                                                   cttcTATTGAAATCTATGCCGGATAAAGCGTTCGCGCTGCATCCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaataat                  >  2:2265213/3‑100 (MQ=255)

                                                                                   catcTATTGAAATTTATGCCGGATAAAGCGTTCACGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaataat                  >  1:2009188/1‑100 (MQ=255)

                                                                                    atcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAAtt                 <  1:1097364/100‑1 (MQ=255)

                                                                                     tcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTc                <  1:2092972/100‑1 (MQ=255)

                                                                                       tATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgc              >  2:1941355/1‑100 (MQ=255)

                                                                                       tATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgc              >  1:171234/1‑100 (MQ=255)

                                                                                        aTTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgcc             >  1:2778488/1‑100 (MQ=255)

                                                                                        aTTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgcc             >  1:545685/1‑100 (MQ=255)

                                                                                        aTTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgcc             >  2:723603/1‑100 (MQ=255)

                                                                                        aTTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgcc             >  1:1123642/1‑100 (MQ=255)

                                                                                         ttGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgccg            >  1:3167230/1‑100 (MQ=255)

                                                                                         ttGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgccg            <  2:489306/100‑1 (MQ=255)

                                                                                          tGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgccgc           <  2:3011409/100‑1 (MQ=255)

                                                                                           gAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCgct          >  1:2167927/1‑100 (MQ=255)

                                                                                           gAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCgct          >  1:693930/1‑100 (MQ=255)

                                                                                             aaTTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCgctgc        >  1:2331897/1‑100 (MQ=255)

                                                                                                ttATGCCGGATAAAGCGTTCGCGCTGCATTCGGCataaatttcaatagatgatcaccgataaacttacgcatcggagatgtttacataggattcagaatt     <  1:2547720‑M2/100‑67 (MQ=255)

                                                                                                  aTGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGttt   <  2:425736/100‑1 (MQ=255)

                                                                                                  aTGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGttt   <  2:1533450/100‑1 (MQ=255)

                                                                                                  aTGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGttn   <  1:2453908/100‑2 (MQ=255)

                                                                                                   tgccgaatgcagcgcgaacgctttatccggcataaatttcaatagatgatcaccgataaacttacgcatcggagatgtttacataggattcagaattact  <  2:437090‑M1/100‑100 (MQ=255)

ATCCACGGCACGGCAAATATTTATAAGAAGAAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTT  >  NC_000913/346724‑346922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.