BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 346823	NA (NA)	3 (0.030)	3/168	NT	NA	intergenic (+64/+34)	yahO/prpR	periplasmic protein, function unknown, YhcN family/propionate catabolism operon regulatory protein
*	?	NC_000913	= 346853	NA (NA)	3 (0.030)	3/168	NT	NA	noncoding (30/30 nt)	REP24 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP24 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 139 total aligned reads displayed.

AAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGCCTGT  >  NC_000913/346754‑346950

aagTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGC                                                                                                   >  2:1856134‑M2/1‑100 (MQ=255)

  gTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAg                                                                                                 >  1:840014/1‑100 (MQ=255)

  gTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAg                                                                                                 <  2:2637085/100‑1 (MQ=255)

    aaTTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGtt                                                                                               >  1:1354365/1‑100 (MQ=255)

    aaTTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGtt                                                                                               >  1:1451061/1‑100 (MQ=255)

    aaTTCTGAATCCTATGTAAACATCTCCGATGCATAAGTTTATCGGCGATCATCTATTGCAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAg                                                                                                 >  1:2836924/1‑98 (MQ=255)

     aTTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTc                                                                                              >  1:3181292/1‑100 (MQ=255)

      ttCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCa                                                                                             <  1:514612/100‑1 (MQ=255)

      ttCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCa                                                                                             <  1:1859887/100‑1 (MQ=255)

       tCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAg                                                                                            >  1:1515418/1‑100 (MQ=255)

       tCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGCATAAAGCGTTCGCGCTGCATTCGGCAGTTCAg                                                                                            >  1:2620329/1‑100 (MQ=255)

         tGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCt                                                                                          <  1:2753994/100‑1 (MQ=255)

            aTCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCtttt                                                                                       >  1:1905256/1‑100 (MQ=255)

            aTCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCtttt                                                                                       >  1:1217526/1‑100 (MQ=255)

             tCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTc                                                                                      <  2:333058/100‑1 (MQ=255)

               cTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAg                                                                                    >  2:2710354/1‑100 (MQ=255)

               cTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAg                                                                                    >  2:3216827/1‑100 (MQ=255)

                tATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgc                                                                                   <  2:1697199/100‑1 (MQ=255)

                tATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgc                                                                                   <  2:217995/100‑1 (MQ=255)

                   gTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAGGCGTTCACGCTGCATTCGGCAGTTCAGCTTTTCAgccgc                                                                                >  1:2354555/1‑100 (MQ=255)

                    tAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgcc                                                                               >  2:1220468/1‑100 (MQ=255)

                    tAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgcc                                                                               <  1:2915497/100‑1 (MQ=255)

                     aaaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccg                                                                              <  2:469902/100‑1 (MQ=255)

                     aaaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccg                                                                              >  2:3026625/1‑100 (MQ=255)

                     aaaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccg                                                                              <  1:1663168/100‑1 (MQ=255)

                      aaCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgc                                                                             >  2:2079632/1‑100 (MQ=255)

                       aCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgcc                                                                            >  1:484320/1‑100 (MQ=255)

                       aCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgcc                                                                            >  1:2276551/1‑100 (MQ=255)

                       aCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgcc                                                                            <  1:3280043/100‑1 (MQ=255)

                       aCATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAgccgccgcc                                                                            >  1:3068873/1‑100 (MQ=255)

                            tcCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAc                                                                       <  2:1542439/100‑1 (MQ=255)

                            tcCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTGATGCCGGATAAAGCGTTCTCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAc                                                                       <  2:1953269/100‑1 (MQ=255)

                             ccGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcg                                                                      >  2:3057897/1‑100 (MQ=255)

                               gATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtc                                                                    <  2:2819824/100‑1 (MQ=255)

                               gATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtc                                                                    >  1:945748/1‑100 (MQ=255)

                                aTGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtcg                                                                   <  1:31157/100‑1 (MQ=255)

                                 tGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAAcgtcgt                                                                  <  1:138697/100‑1 (MQ=255)

                                  gCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACgtcgtc                                                                 >  2:3198320/1‑100 (MQ=255)

                                   cGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTcc                                                                <  2:35910/100‑1 (MQ=255)

                                    gTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCg                                                               >  2:2608651/1‑100 (MQ=255)

                                      aaGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGc                                                             <  2:2701657/100‑1 (MQ=255)

                                       aGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCt                                                            <  2:470605/100‑1 (MQ=255)

                                        gTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTg                                                           >  2:1976694/1‑100 (MQ=255)

                                            aTCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGc                                                       >  1:1787511/1‑100 (MQ=255)

                                             tCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGcc                                                      <  2:2032460/100‑1 (MQ=255)

                                                  gATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaat                                                 <  1:59843/100‑1 (MQ=255)

                                                  gATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaat                                                 <  2:945751/100‑1 (MQ=255)

                                                   atcatcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaata                                                <  1:1871819/100‑1 (MQ=255)

                                                     cttcTATTGAAATCTATGCCGGATAAAGCGTTCGCGCTGCATCCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaataat                                              >  2:2265213/3‑100 (MQ=255)

                                                     catcTATTGAAATTTATGCCGGATAAAGCGTTCACGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAaataat                                              >  1:2009188/1‑100 (MQ=255)

                                                      atcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAAtt                                             <  1:1097364/100‑1 (MQ=255)

                                                       tcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTc                                            <  1:2092972/100‑1 (MQ=255)

                                                       tcTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTc                                            >  2:742023/1‑100 (MQ=255)

                                                         tATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgc                                          <  1:3103312/100‑1 (MQ=255)

                                                         tATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgc                                          >  2:1941355/1‑100 (MQ=255)

                                                         tATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgc                                          >  1:171234/1‑100 (MQ=255)

                                                          aTTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgcc                                         >  2:2240617/1‑100 (MQ=255)

                                                          aTTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgcc                                         >  2:723603/1‑100 (MQ=255)

                                                          aTTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgcc                                         >  1:1123642/1‑100 (MQ=255)

                                                          aTTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgcc                                         >  1:2778488/1‑100 (MQ=255)

                                                          aTTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgcc                                         >  1:545685/1‑100 (MQ=255)

                                                           ttGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgccg                                        >  1:3167230/1‑100 (MQ=255)

                                                           ttGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgccg                                        <  2:489306/100‑1 (MQ=255)

                                                            tGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTcgccgc                                       >  2:3039180/1‑100 (MQ=255)

                                                             gAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCgct                                      >  1:693930/1‑100 (MQ=255)

                                                             gAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCgct                                      >  1:2167927/1‑100 (MQ=255)

                                                               aaTTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCataaatttcaatagatgatcaccgataaacttacgcatcggagatgtttacataggattcaga                                    <  2:388945‑M2/100‑64 (MQ=255)

                                                               aaTTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCgctgc                                    >  1:2331897/1‑100 (MQ=255)

                                                                  ttATGCCGGATAAAGCGTTCGCGCTGCATTCGGCataaatttcaatagatgatcaccgataaacttacgcatcggagatgtttacataggattcagaatt                                 <  1:2547720‑M2/100‑67 (MQ=255)

                                                                    aTGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGttt                               <  2:1533450/100‑1 (MQ=255)

                                                                    aTGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGttt                               <  2:425736/100‑1 (MQ=255)

                                                                    aTGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGttn                               <  1:2453908/100‑2 (MQ=255)

                                                                      gCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTa                             >  1:691568/1‑100 (MQ=255)

                                                                         ggATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCg                          >  2:60387/1‑100 (MQ=255)

                                                                            tAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAAAAATTCGCCGCTGCTGTTTTATCGcc                        >  1:1457778/1‑99 (MQ=255)

                                                                             aaaGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCAt                      >  2:2609701/1‑100 (MQ=255)

                                                                                gCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTaa                   >  2:856742/1‑100 (MQ=255)

                                                                                 cGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTaaa                  <  2:2403749/100‑1 (MQ=255)

                                                                                  gTTCGCGCGGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAAt                 <  2:362795/100‑1 (MQ=255)

                                                                                   ttCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCCTTAAAtt                >  1:1647653/1‑100 (MQ=255)

                                                                                   ttCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAAtt                <  2:2130516/100‑1 (MQ=255)

                                                                                   ttCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAAtt                <  2:185607/100‑1 (MQ=255)

                                                                                   ttCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAAtt                <  2:2009202/100‑1 (MQ=255)

                                                                                     cgcgCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTtc              <  2:2833167/100‑1 (MQ=255)

                                                                                        gcTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTTCTGTTTTATCGCCATTAAATTTCTcc           <  2:2042206/100‑1 (MQ=255)

                                                                                        gcTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTcc           <  2:2437190/100‑1 (MQ=255)

                                                                                          tGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAg         <  1:3346667/100‑1 (MQ=255)

                                                                                          tGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAg         <  1:198914/100‑1 (MQ=255)

                                                                                          tGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAg         >  2:1346765/1‑100 (MQ=255)

                                                                                          tGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATCCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCa          >  1:961854/1‑99 (MQ=255)

                                                                                           gCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGt        >  1:2458760/1‑100 (MQ=255)

                                                                                             aTTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGc      >  1:3334338/1‑100 (MQ=255)

                                                                                             aTTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGc      <  2:722363/100‑1 (MQ=255)

                                                                                             aTTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGc      >  2:1098138/1‑100 (MQ=255)

                                                                                              ttCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGcc     <  1:2218434/100‑1 (MQ=255)

                                                                                              ttCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGcc     >  2:2593839/1‑100 (MQ=255)

                                                                                              ttCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGc      <  1:2998217/99‑1 (MQ=255)

                                                                                               tCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGCCt    >  1:2489085/1‑100 (MQ=255)

                                                                                               tCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGCCt    >  1:1426011/1‑100 (MQ=255)

                                                                                                 ggCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGCCtgt  >  2:472522/1‑100 (MQ=255)

AAGTAATTCTGAATCCTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGCCGCCAGAACGTCGTCCGGCTGATGCCTAAATAATTCGCCGCTGCTGTTTTATCGCCATTAAATTTCTCCAGTGCCTGT  >  NC_000913/346754‑346950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.