New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 526041	NA (NA)	6 (0.050)	6/170	NT	100%	coding (2781/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 526069	0 (0.000)					coding (2809/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAG  >  NC_000913/525967‑526137                                                                           |                                                                                                 gCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGC                                                                         >  1:1087292‑M2/1‑100 (MQ=255) gCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGC                                                                         <  2:1536755‑M2/100‑1 (MQ=255)  ctccagACCTGGAAATCCGCATCCCGTATGCCACGGACCCGGGGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCC                                                                        <  2:2267256‑M2/98‑1 (MQ=255)  cACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCC                                                                        <  1:17712‑M2/100‑1 (MQ=255)  cACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCC                                                                        <  2:2647714‑M2/100‑1 (MQ=255)  cACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCC                                                                        >  2:2400423‑M2/1‑100 (MQ=255)  cACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCC                                                                        <  2:1625242‑M2/100‑1 (MQ=255)   aCCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCG                                                                       >  1:2308552‑M2/1‑100 (MQ=255)   aCCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCG                                                                       >  2:2678763‑M2/1‑100 (MQ=255)   aCCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCG                                                                       >  2:1582843‑M2/1‑100 (MQ=255)    ccAGACCTGGGCATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGG                                                                      >  1:2193271‑M2/1‑100 (MQ=255)    ccAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGG                                                                      <  1:1415320‑M2/100‑1 (MQ=255)    ccAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGG                                                                      >  2:643273‑M2/1‑100 (MQ=255)    ccAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGG                                                                      <  2:1831666‑M2/100‑1 (MQ=255)    ccAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGG                                                                      <  2:1111333‑M2/100‑1 (MQ=255)    ccAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGG                                                                      <  1:2558548‑M2/100‑1 (MQ=255)    ccAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGG                                                                      <  1:187238‑M2/100‑1 (MQ=255)    ccAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTACACCCGGACAGTACACTCACAGTGTGGCCGG                                                                      <  2:1704655‑M2/100‑1 (MQ=255)                                                            ggACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgc              <  2:2475810‑M2/100‑57 (MQ=255)                                                                     gCTGCACCCGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgcggatgtcca     <  1:2368924‑M2/100‑66 (MQ=255)                                                                       tGCACCCGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgcggatgtccagg   <  1:308437‑M2/100‑68 (MQ=255)                                                                        gCACCCGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgcggatgtccaggt  <  2:1262011‑M2/100‑69 (MQ=255)                                                                           cccGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgcggatgtccagg   <  1:2924986‑M2/96‑68 (MQ=255)                                                                           |                                                                                                 GCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAG  >  NC_000913/525967‑526137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.