New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 881947NA (NA)8 (0.070) 6/156 NT NA noncoding (8/27 nt) REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 881958 NA (NA)noncoding (19/27 nt) REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 150 total aligned reads displayed.

AGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCA  >  NC_000913/881851‑882046
                                                                                                |                                                                                                   
  agGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGcgcg                                                                                                >  1:2801656/1‑100 (MQ=255)
   gggCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGa                                                                                               >  1:111048/1‑100 (MQ=255)
    ggCGGATTCTTTGGTCGGGTGTGGGATTTCTTGATGCTGAAATTCCATCAGTGGTTCGGCAGCGGGTTCTGTTAATCTTCTGATAACCGGATGgcgtg                                                                                                <  1:322616/98‑3 (MQ=255)
    ggCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGaa                                                                                              >  1:2532715/1‑100 (MQ=255)
      cGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGacgtttcgc                                                                                            >  1:1386448‑M1/1‑91 (MQ=255)
      cGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAAc                                                                                            <  1:779457/100‑1 (MQ=255)
      cGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAAc                                                                                            <  1:709896/100‑1 (MQ=255)
        gATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGt                                                                                          >  2:1232541/1‑100 (MQ=255)
        gATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGt                                                                                          >  2:2854823/1‑100 (MQ=255)
          ttCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTca                                                                                        >  1:1057295‑M2/1‑98 (MQ=255)
            cTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatc                                                                                      <  2:1993887‑M2/100‑5 (MQ=255)
             tttGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatcc                                                                                     <  1:412209‑M2/100‑6 (MQ=255)
             tttGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatcc                                                                                     <  1:69412‑M2/100‑6 (MQ=255)
               tGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGacgtttcgcgccatccgg                                                                                   <  2:2123319‑M1/100‑19 (MQ=255)
                ggTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGacgttccgcgccatccgct                                                                                  <  2:2264696‑M1/100‑20 (MQ=255)
                ggTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggt                                                                                  >  2:65362‑M2/1‑92 (MQ=255)
                ggTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggt                                                                                  >  2:2143818‑M2/1‑92 (MQ=255)
                ggTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggt                                                                                  >  2:161625‑M2/1‑92 (MQ=255)
                ggTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggt                                                                                  <  2:20259‑M2/100‑9 (MQ=255)
                 gTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggtt                                                                                 <  2:1854014‑M2/100‑10 (MQ=255)
                  tCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggtta                                                                                <  1:127634‑M2/100‑11 (MQ=255)
                   cGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGacgtttcgcgccatccggttat                                                                               <  2:925719‑M1/100‑23 (MQ=255)
                   cGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggttat                                                                               <  2:1520980‑M2/100‑12 (MQ=255)
                      gtgtGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACg                                                                            <  1:1232537/100‑1 (MQ=255)
                          gggATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAt                                                                        >  1:1545754/1‑100 (MQ=255)
                           ggATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAtt                                                                       <  2:111049/100‑1 (MQ=255)
                             aTTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGacgtttcgcgccatccggttatcagaagatta                                                                     <  1:733071‑M1/100‑33 (MQ=255)
                               ttCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATa                                                                   <  1:2231834/100‑1 (MQ=255)
                               ttCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATa                                                                   <  1:1145720/100‑1 (MQ=255)
                                tCGTGATGATGATATCCCATCAGTGGTTCGGCAGCTGGGTTTCTTAATCTTCTGATAACCGGATGGCGCGAATCGTCATCCGGTTATACGTCATTAATAc                                                                  <  1:1014200/100‑1 (MQ=255)
                                tCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGacgtttcgcgccatccggttatcagaagattaaga                                                                  <  1:3186501‑M1/100‑36 (MQ=255)
                                tCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATAc                                                                  <  2:228009/100‑1 (MQ=255)
                                 cGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACa                                                                 <  2:2801679/100‑1 (MQ=255)
                                  gTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACAt                                                                >  1:1624282/1‑100 (MQ=255)
                                   tgatgatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGACACGTCATCCGGTTATACGTCATTAATACATc                                                               >  1:2511187/1‑100 (MQ=255)
                                   tgatgatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATc                                                               >  2:1882666/1‑100 (MQ=255)
                                       gatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACTTCATCCGGTTATACGTCATTAATACATCAACt                                                           <  1:3164483/100‑1 (MQ=255)
                                       gatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACt                                                           >  1:933553/1‑100 (MQ=255)
                                       gatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACt                                                           <  1:1667594/100‑1 (MQ=255)
                                        atgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACtt                                                          <  1:2564494/100‑1 (MQ=255)
                                          gaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTaa                                                        >  2:2213840/1‑100 (MQ=255)
                                           aaaTTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAAt                                                       <  2:2703911/100‑1 (MQ=255)
                                             aTTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc                                                     <  1:1768175/100‑1 (MQ=255)
                                                ccATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt                                                  <  1:2421068/100‑1 (MQ=255)
                                                ccATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt                                                  >  2:1491039/1‑100 (MQ=255)
                                                  aTCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGc                                                <  1:1415357/100‑1 (MQ=255)
                                                   tCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCg                                               <  2:2374949/100‑1 (MQ=255)
                                                   tCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCg                                               <  2:2338524/100‑1 (MQ=255)
                                                       tGGTTCGGCAGCTTGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTc                                             <  2:3128412/98‑1 (MQ=255)
                                                         gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcg                                         <  1:191757/100‑1 (MQ=255)
                                                         gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcg                                         >  2:2679483/1‑100 (MQ=255)
                                                         gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcg                                         <  2:2212376/100‑1 (MQ=255)
                                                         gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcg                                         >  2:1773180/1‑100 (MQ=255)
                                                           tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGcgcg                                       <  1:2056277/100‑1 (MQ=255)
                                                           tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGcgcg                                       <  2:1545760/100‑1 (MQ=255)
                                                            cGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGt                                      <  2:32195/100‑1 (MQ=255)
                                                            cGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGt                                      >  1:1045362/1‑100 (MQ=255)
                                                            cGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGt                                      <  1:1696927/100‑1 (MQ=255)
                                                              gCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTAc                                    <  2:1624288/100‑1 (MQ=255)
                                                               cAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACt                                   >  1:2220237/1‑100 (MQ=255)
                                                                 gCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTc                                 <  2:1685581/100‑1 (MQ=255)
                                                                 gCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTc                                 >  2:3097050/1‑100 (MQ=255)
                                                                   tGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTcac                               <  1:2761454/100‑1 (MQ=255)
                                                                    ggTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTcaca                              <  2:1091300/100‑1 (MQ=255)
                                                                    ggTGCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTcaca                              <  1:2314467/100‑1 (MQ=255)
                                                                     gTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACAt                             >  2:1772184/1‑100 (MQ=255)
                                                                      ttCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATa                            <  1:1522375/100‑1 (MQ=255)
                                                                        ctctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACt                          >  2:1347095/1‑100 (MQ=255)
                                                                         tctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTc                         >  2:842322/1‑100 (MQ=255)
                                                                          ctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCa                        >  2:850532/1‑100 (MQ=255)
                                                                            tAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATc                      <  2:434191/100‑1 (MQ=255)
                                                                             aaTCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCt                     <  2:1114803/100‑1 (MQ=255)
                                                                               tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTc                   >  2:1418024/1‑100 (MQ=255)
                                                                                cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTcc                  <  1:503125/100‑1 (MQ=255)
                                                                                cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTcc                  >  2:2070028/1‑100 (MQ=255)
                                                                                cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAAATTAATGCGCTGAGACTGCGCGTACTTCACATACTAATCTTcc                  >  1:1596095/1‑100 (MQ=255)
                                                                                   ctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg               <  1:1224685/100‑1 (MQ=255)
                                                                                   ctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg               >  1:2454854/1‑100 (MQ=255)
                                                                                    tGATAACCGGATGGCGCGAAACGTcatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacc              <  2:1386453‑M2/100‑77 (MQ=255)
                                                                                    tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg               <  2:151263/99‑1 (MQ=255)
                                                                                    tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGc              <  1:390151/100‑1 (MQ=255)
                                                                                    tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGc              <  2:69413/100‑1 (MQ=255)
                                                                                    tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGc              <  2:695116/100‑1 (MQ=255)
                                                                                      aTAACCGGATGacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccg            <  1:398‑M1/100‑90 (MQ=255)
                                                                                      aTAACCGGATGGCGCGAAACGTcatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccg            <  2:925719‑M2/100‑79 (MQ=255)
                                                                                      aTAACCGGATGGCGCGAAACGTcatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccg            <  1:1714970‑M2/100‑79 (MQ=255)
                                                                                       tAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGcaac           <  1:535602/100‑1 (MQ=255)
                                                                                        aaCCGGATGacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgac          <  1:110723‑M1/100‑92 (MQ=255)
                                                                                         agcggATGGCGCGGAACGTcatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgacc         <  2:2264696‑M2/98‑82 (MQ=255)
                                                                                         aCCGGATGacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgacc         >  2:2143818‑M1/1‑8 (MQ=255)
                                                                                         aCCGGATGacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgacc         >  2:65362‑M1/1‑8 (MQ=255)
                                                                                         aCCGGATGacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgacc         >  2:161625‑M1/1‑8 (MQ=255)
                                                                                         aCCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGcaacaa         >  2:2524883/1‑100 (MQ=255)
                                                                                          ccGGATGGCGCGAAACGTcatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgacca        <  2:2123319‑M2/100‑83 (MQ=255)
                                                                                            ggATGacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgaccaaa      <  1:412209‑M1/100‑96 (MQ=255)
                                                                                            ggATGacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgaccaaa      >  1:1313856‑M1/1‑5 (MQ=255)
                                                                                            ggATGacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgaccaaa      <  1:69412‑M1/100‑96 (MQ=255)
                                                                                             gATGacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgaccaaag     <  2:1993887‑M1/100‑97 (MQ=255)
                                                                                              aTGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCt    <  1:318855/100‑1 (MQ=255)
                                                                                                gacgtttcgcgccatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgaccaaagaat  <  1:923830‑M1/100‑100 (MQ=255)
                                                                                                |                                                                                                   
AGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCA  >  NC_000913/881851‑882046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.