New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 881947NA (NA)8 (0.070) 6/156 NT NA noncoding (8/27 nt) REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 881958 NA (NA)noncoding (19/27 nt) REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 122 total aligned reads displayed.

GATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATC  >  NC_000913/881859‑882056
                                                                                                   |                                                                                                  
gATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGt                                                                                                    <  1:1648573/100‑1 (MQ=255)
gATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGt                                                                                                    >  2:1232541/1‑100 (MQ=255)
gATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGt                                                                                                    >  2:2854823/1‑100 (MQ=255)
 aTTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTc                                                                                                   <  1:923830‑M2/100‑2 (MQ=255)
  ttCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTca                                                                                                  >  1:1057295‑M2/1‑98 (MQ=255)
     tttGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatcc                                                                                               >  1:1313856‑M2/1‑95 (MQ=255)
     tttGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatcc                                                                                               <  1:412209‑M2/100‑6 (MQ=255)
     tttGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatcc                                                                                               <  1:69412‑M2/100‑6 (MQ=255)
        ggTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggt                                                                                            >  2:2143818‑M2/1‑92 (MQ=255)
        ggTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggt                                                                                            >  2:161625‑M2/1‑92 (MQ=255)
        ggTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggt                                                                                            >  2:65362‑M2/1‑92 (MQ=255)
        ggTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggt                                                                                            <  2:20259‑M2/100‑9 (MQ=255)
         gTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggtt                                                                                           <  2:1854014‑M2/100‑10 (MQ=255)
         gTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggtt                                                                                           <  1:110723‑M2/100‑10 (MQ=255)
          tCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggtta                                                                                          <  1:127634‑M2/100‑11 (MQ=255)
           cGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggttat                                                                                         <  1:398‑M2/100‑12 (MQ=255)
           cGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTcatccggttat                                                                                         <  2:1520980‑M2/100‑12 (MQ=255)
              gtgtGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACg                                                                                      <  1:2422145/100‑1 (MQ=255)
              gtgtGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACg                                                                                      <  1:1232537/100‑1 (MQ=255)
               tgtgGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGt                                                                                     >  1:618498/1‑100 (MQ=255)
                  gggATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAt                                                                                  >  1:1545754/1‑100 (MQ=255)
                  gggATTTCGTGATGATGAAATTACATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGtaa                                                                                   >  2:212013/1‑97 (MQ=255)
                   ggATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAtt                                                                                 <  2:111049/100‑1 (MQ=255)
                    gATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTa                                                                                >  2:1210563/1‑100 (MQ=255)
                       ttCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATa                                                                             <  1:1145720/100‑1 (MQ=255)
                       ttCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATa                                                                             <  1:2231834/100‑1 (MQ=255)
                        tCGTGATGATGATATCCCATCAGTGGTTCGGCAGCTGGGTTTCTTAATCTTCTGATAACCGGATGGCGCGAATCGTCATCCGGTTATACGTCATTAATAc                                                                            <  1:1014200/100‑1 (MQ=255)
                        tCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATAc                                                                            <  2:228009/100‑1 (MQ=255)
                         cGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACa                                                                           <  2:2801679/100‑1 (MQ=255)
                          gTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACAt                                                                          >  2:2148249/1‑100 (MQ=255)
                          gTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACAt                                                                          >  1:1624282/1‑100 (MQ=255)
                          gTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACAt                                                                          >  1:3052012/1‑100 (MQ=255)
                           tgatgatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGACACGTCATCCGGTTATACGTCATTAATACATc                                                                         >  1:2511187/1‑100 (MQ=255)
                           tgatgatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATc                                                                         >  2:1882666/1‑100 (MQ=255)
                               gatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACTTCATCCGGTTATACGTCATTAATACATCAACt                                                                     <  1:3164483/100‑1 (MQ=255)
                               gatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACt                                                                     <  1:1667594/100‑1 (MQ=255)
                               gatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACt                                                                     >  1:933553/1‑100 (MQ=255)
                                atgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACtt                                                                    <  1:2564494/100‑1 (MQ=255)
                                  gaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTaa                                                                  >  2:2213840/1‑100 (MQ=255)
                                   aaaTTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAAt                                                                 <  2:2703911/100‑1 (MQ=255)
                                     aTTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc                                                               <  1:1768175/100‑1 (MQ=255)
                                     aTTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc                                                               <  1:1854002/100‑1 (MQ=255)
                                        ccATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt                                                            >  2:1491039/1‑100 (MQ=255)
                                        ccATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt                                                            <  1:2421068/100‑1 (MQ=255)
                                          aTCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGc                                                          <  1:1415357/100‑1 (MQ=255)
                                           tCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCg                                                         <  2:2338524/100‑1 (MQ=255)
                                           tCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCg                                                         <  2:2374949/100‑1 (MQ=255)
                                             aGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCggc                                                       <  2:2272578/100‑3 (MQ=255)
                                              gTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCCTTAATACATCAACTTAATGCGCTGCGTCt                                                      >  2:2965103/1‑100 (MQ=255)
                                              gTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCt                                                      >  1:144911/1‑100 (MQ=255)
                                               tGGTTCGGCAGCTTGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTc                                                       <  2:3128412/98‑1 (MQ=255)
                                                 gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcg                                                   <  1:213807/100‑1 (MQ=255)
                                                 gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcg                                                   >  2:1773180/1‑100 (MQ=255)
                                                 gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcg                                                   <  1:191757/100‑1 (MQ=255)
                                                 gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcg                                                   >  2:2679483/1‑100 (MQ=255)
                                                 gTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcg                                                   <  2:2212376/100‑1 (MQ=255)
                                                   tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGcgcg                                                 <  2:1545760/100‑1 (MQ=255)
                                                    cGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGt                                                >  1:1045362/1‑100 (MQ=255)
                                                    cGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGt                                                <  1:1696927/100‑1 (MQ=255)
                                                     ggCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTa                                               <  2:1622226/100‑1 (MQ=255)
                                                      gCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTAc                                              <  2:1624288/100‑1 (MQ=255)
                                                       cAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACt                                             >  2:691553/1‑100 (MQ=255)
                                                       cAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACt                                             >  1:2220237/1‑100 (MQ=255)
                                                         gCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTc                                           >  2:3097050/1‑100 (MQ=255)
                                                         gCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTc                                           <  2:1685581/100‑1 (MQ=255)
                                                          cTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTca                                          <  2:2655526/100‑1 (MQ=255)
                                                           tGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTcac                                         <  1:2761454/100‑1 (MQ=255)
                                                            ggTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTcaca                                        <  2:1091300/100‑1 (MQ=255)
                                                             gTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTcaca                                        <  2:1978011/99‑1 (MQ=255)
                                                             gTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACAt                                       >  2:1772184/1‑100 (MQ=255)
                                                              ttCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATa                                      <  1:1522375/100‑1 (MQ=255)
                                                                ctctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACt                                    >  2:1347095/1‑100 (MQ=255)
                                                                 tctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTc                                   >  2:842322/1‑100 (MQ=255)
                                                                 tctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTc                                   >  1:2234260/1‑100 (MQ=255)
                                                                  ctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCa                                  >  2:850532/1‑100 (MQ=255)
                                                                    tAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATc                                <  2:434191/100‑1 (MQ=255)
                                                                     aaTCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCt                               <  2:1114803/100‑1 (MQ=255)
                                                                     aaTCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCt                               <  2:436416/100‑1 (MQ=255)
                                                                       tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTc                             >  2:1418024/1‑100 (MQ=255)
                                                                        cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTcc                            <  1:503125/100‑1 (MQ=255)
                                                                        cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTcc                            >  2:2070028/1‑100 (MQ=255)
                                                                        cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAAATTAATGCGCTGAGACTGCGCGTACTTCACATACTAATCTTcc                            >  1:1596095/1‑100 (MQ=255)
                                                                           ctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg                         <  1:1224685/100‑1 (MQ=255)
                                                                           ctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg                         >  1:2454854/1‑100 (MQ=255)
                                                                            tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg                         <  2:151263/99‑1 (MQ=255)
                                                                            tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGc                        <  1:390151/100‑1 (MQ=255)
                                                                            tGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGc                        <  2:69413/100‑1 (MQ=255)
                                                                              aTAACCGGATGGCGCGAAACGTcatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccg                      <  2:925719‑M2/100‑79 (MQ=255)
                                                                               tAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGcaac                     <  2:2226181/100‑1 (MQ=255)
                                                                               tAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGcaac                     <  1:535602/100‑1 (MQ=255)
                                                                                 aCCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGcaacaa                   >  2:2524883/1‑100 (MQ=255)
                                                                                  ccGGATGGCGCGAAACGTcatccggttatcagaagattaagagaaccagctgccgaaccactgatggaatttcatcatcacgaaatcccacacccgacca                  <  2:2123319‑M2/100‑83 (MQ=255)
                                                                                   cGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATc                 <  2:923833/100‑1 (MQ=255)
                                                                                      aTGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCt              <  1:318855/100‑1 (MQ=255)
                                                                                          cgcgAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTcacc          <  1:2213823/100‑1 (MQ=255)
                                                                                              aaaCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACaa      <  1:966554/100‑1 (MQ=255)
                                                                                               aaCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAat     >  1:3247615/1‑100 (MQ=255)
                                                                                                aCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAata    >  1:1908536/1‑100 (MQ=255)
                                                                                                aCGTCATCCGGTTATACGTCATTAATACATCAACGTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAata    <  1:1354833/100‑1 (MQ=255)
                                                                                                  gTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATc  >  1:280349/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
GATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATC  >  NC_000913/881859‑882056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.