BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3650792	NA (NA)	6 (0.050)	5/166	NT	NA	noncoding (81/100 nt)	RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	= 3650805	NA (NA)	6 (0.050)	5/166	NT	NA	noncoding (94/100 nt)	RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 164 total aligned reads displayed.

ATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCGAT  >  NC_000913/3650706‑3650901

atttatGTCTGATGCGACGCTGGCGCGTCTTATCCGACTTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCATGACAGGCGTAGCGCa                                                                                                  >  1:93396/1‑100 (MQ=255)

atttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCa                                                                                                  >  1:2401075/1‑100 (MQ=255)

atttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCa                                                                                                  >  1:2379122/1‑100 (MQ=255)

 tttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAt                                                                                                 <  1:1245323‑M2/100‑2 (MQ=255)

 tttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAt                                                                                                 <  2:159‑M2/100‑2 (MQ=255)

  ttATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtc                                                                                                >  1:451817‑M2/1‑98 (MQ=255)

   tATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtca                                                                                               <  2:2066538‑M2/100‑4 (MQ=255)

   tATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtca                                                                                               <  2:1789774‑M2/100‑4 (MQ=255)

    aTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcag                                                                                              <  1:2590395‑M2/100‑5 (MQ=255)

     ggtcggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAgg                                                                                             >  1:1731839‑M2/34‑100 (MQ=255)

      gTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAtcaggc                                                                                            <  2:2106418‑M2/100‑7 (MQ=255)

       TCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCg                                                                                           <  2:449317‑M1/100‑1 (MQ=255)

        cggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGa                                                                                          >  2:563600‑M2/31‑100 (MQ=255)

        CGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGa                                                                                          <  2:1808587‑M1/100‑1 (MQ=255)

         ggataagacgcgccagcgtcttatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                                                                                         >  2:1278600‑M2/30‑100 (MQ=255)

         ggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                                                                                         >  2:2838248‑M2/30‑100 (MQ=255)

         GGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                                                                                         <  2:2553515‑M1/100‑1 (MQ=255)

         GGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                                                                                         >  2:2172719‑M1/1‑100 (MQ=255)

              cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGTCCTGACAAGCGTAGCGCATCAGGCGa                                                                                          >  1:2798555/1‑94 (MQ=255)

              cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGc                                                                                    >  2:1819344/1‑100 (MQ=255)

              cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGACTGACAGGCGTAGCGCATCAGGCGATTTTGc                                                                                    <  2:2413297/100‑1 (MQ=255)

                  gCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAtt                                                                                <  2:120774/100‑1 (MQ=255)

                  gCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAtt                                                                                <  1:3119766/100‑1 (MQ=255)

                    tGGCGCGTCTTATCCGACCTACAAAGTTATGAATATTCGATGAATAGTATGTTATTTGTAGGTCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTa                                                                              <  1:2837299/100‑1 (MQ=255)

                    tGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTa                                                                              <  2:2322297/100‑1 (MQ=255)

                     ggCGCGTCTTATCAGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                                                                             >  1:2069118/1‑100 (MQ=255)

                       cgcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTacac                                                                           <  2:607677/100‑1 (MQ=255)

                       cgcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTacac                                                                           <  1:856507/100‑1 (MQ=255)

                        gcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTAcaca                                                                          <  1:76273/100‑1 (MQ=255)

                             ttATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTGCACAGTACt                                                                     <  1:1247707/100‑1 (MQ=255)

                             ttATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACt                                                                     >  2:2562602/1‑100 (MQ=255)

                              natccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTc                                                                    >  1:1735649‑M2/9‑100 (MQ=255)

                                 ccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCt                                                                 >  2:2177688‑M2/6‑100 (MQ=255)

                                    acCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACCCCCTGCg                                                              >  1:677508‑M2/3‑100 (MQ=255)

                                     cCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGt                                                             <  1:2547652‑M2/99‑1 (MQ=255)

                                      cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg                                                            <  1:2931011/100‑1 (MQ=255)

                                      cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg                                                            <  2:1560352/100‑1 (MQ=255)

                                      cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg                                                            >  1:3272589/1‑100 (MQ=255)

                                       tACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTga                                                           <  1:1278596/100‑1 (MQ=255)

                                       tACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTga                                                           >  2:2786925/1‑100 (MQ=255)

                                        aCAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTgag                                                          <  2:2081299/100‑1 (MQ=255)

                                            aGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTc                                                      <  1:2423195/100‑1 (MQ=255)

                                             gTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTcc                                                     >  2:773874/1‑100 (MQ=255)

                                             gTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTcc                                                     <  1:2819874/100‑1 (MQ=255)

                                             gTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTcc                                                     <  2:818840/100‑1 (MQ=255)

                                               tATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCaa                                                   <  1:58380/100‑1 (MQ=255)

                                                aTGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAAt                                                  >  1:1513564/1‑100 (MQ=255)

                                                aTGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAAt                                                  <  2:2590415/100‑1 (MQ=255)

                                                 ngAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAAtt                                                 >  1:1171355/2‑100 (MQ=255)

                                                  gAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTa                                                >  1:2630655/1‑100 (MQ=255)

                                                   gaaaTTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTan                                               <  2:1136858/99‑2 (MQ=255)

                                                   aaaaTTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTAt                                               >  1:2926932/1‑100 (MQ=255)

                                                   aaaaTTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCACTGCGTGAGATTCCAATTAt                                               >  1:1032036/1‑100 (MQ=255)

                                                      aTTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATcg                                             >  1:360422/1‑99 (MQ=255)

                                                          gATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTcc                                        <  1:1150956/100‑1 (MQ=255)

                                                          gATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTcc                                        >  1:1895899/1‑100 (MQ=255)

                                                          gATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTcc                                        <  1:2317544/100‑1 (MQ=255)

                                                            tGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAg                                      <  1:2066524/100‑1 (MQ=255)

                                                             gAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGc                                     <  1:290711/100‑1 (MQ=255)

                                                                tAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATg                                  <  1:3324535/100‑1 (MQ=255)

                                                                 aGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATgg                                 <  2:2709020/100‑1 (MQ=255)

                                                                 aGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATgg                                 <  1:2728457/100‑1 (MQ=255)

                                                                 aGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATgg                                 <  2:476438/100‑1 (MQ=255)

                                                                  gTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCa                                    >  1:2971407/1‑96 (MQ=255)

                                                                  gTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGgt                                <  1:756208/100‑1 (MQ=255)

                                                                  gTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGgt                                >  2:1435643/1‑100 (MQ=255)

                                                                   tATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGgtg                               <  2:1649518/100‑1 (MQ=255)

                                                                   tATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGgtg                               <  2:1665585/100‑1 (MQ=255)

                                                                    aTGTTATTTGTAGGCCTGACAGTCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGgtgt                              >  1:2609980/1‑100 (MQ=255)

                                                                     tGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTa                             >  2:268766/1‑100 (MQ=255)

                                                                     tGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTa                             >  1:1468718/1‑100 (MQ=255)

                                                                      gTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTAt                            <  1:3123153/100‑1 (MQ=255)

                                                                       ttATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATc                           <  2:2205852/100‑1 (MQ=255)

                                                                         aTTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAg                         <  1:108407/100‑1 (MQ=255)

                                                                           ttGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTg                       >  1:196624/1‑100 (MQ=255)

                                                                           ttGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTg                       <  2:1350711/100‑1 (MQ=255)

                                                                           ttGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTg                       <  1:1213640/100‑1 (MQ=255)

                                                                           ttGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACCCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTg                       <  2:677509/100‑1 (MQ=255)

                                                                           ntGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTg                       >  2:1083069/2‑100 (MQ=255)

                                                                             gTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAg                     >  1:2243126/1‑100 (MQ=255)

                                                                             gTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGATATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAg                     >  2:2360796/1‑100 (MQ=255)

                                                                              tAGGCCTGACAGGCGTAGCGCAtcaggcctacaaataacatactattcatcgaattttcataactttgtaggtcggataagacgcgccagcgtcgcatcc                    <  1:999261‑M2/100‑79 (MQ=255)

                                                                               aGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgct                   <  2:1033797/100‑1 (MQ=255)

                                                                               aGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgct                   <  2:2926958/100‑1 (MQ=255)

                                                                                ggCCTGACAGGCGTAGCGCAtcaggcctacaaataacatactattaatcgaattttcataactatgtaggtcgcataagacgcgccagcgtcgcatccga                  <  1:2507189‑M2/100‑81 (MQ=255)

                                                                                 gCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAgctgc                 >  1:1880679/1‑100 (MQ=255)

                                                                                     gACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAg             <  2:1245327/100‑1 (MQ=255)

                                                                                     gACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAg             >  2:3137370/1‑100 (MQ=255)

                                                                                     gACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAg             >  2:3149958/1‑100 (MQ=255)

                                                                                      aCAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGt            <  1:211161/100‑1 (MQ=255)

                                                                                       cAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGtt           >  2:2473449/1‑100 (MQ=255)

                                                                                        aGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTa          <  2:1895911/100‑1 (MQ=255)

                                                                                         ggCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTAt         >  2:1453240/1‑100 (MQ=255)

                                                                                          gCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATc        <  2:3273863/100‑1 (MQ=255)

                                                                                           cGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCa       >  1:2158482/1‑100 (MQ=255)

                                                                                           cGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCa       <  2:390716/100‑1 (MQ=255)

                                                                                             tAGCGCATCACGCGATTTTGCTATTTACACCGTGCTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCAGGGGGTATCAGTGAGCTGCTTAGTTATCAGc     <  1:517679/100‑1 (MQ=255)

                                                                                              aGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCg    <  1:1643421/100‑1 (MQ=255)

                                                                                              aGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCg    <  2:951118/100‑1 (MQ=255)

                                                                                                cgcATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCGAt  <  2:2506385/100‑1 (MQ=255)

ATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTGAGATTCCAATTATCGCGTCCAGCATGGTGTATCAGTGAGCTGCTTAGTTATCAGCGAT  >  NC_000913/3650706‑3650901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.