New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4601572 =145 (1.170)10 (0.090) 8/162 NT 7.4% intergenic (‑55/+52) dnaT/yjjB DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein
?NC_000913 4601608 = 119 (1.060)intergenic (‑91/+16) dnaT/yjjB DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 185 total aligned reads displayed.

GGAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTGT  >  NC_000913/4601509‑4601707
                                                                                                   |                                                                                                   
tttccattcctggattatggttgtaccgcaagcgccctcgcgtataaaattgcctcgcttaagCACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGc                                                                                                     >  2:2150012‑M1/64‑100 (MQ=255)
ggAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGc                                                                                                     <  2:2224565/100‑1 (MQ=255)
 ttccattcctggattatggttgtaccgcaagcgccctcgcgtataaaattgcctcgcttaagCACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCt                                                                                                    >  1:2408975‑M1/63‑100 (MQ=255)
 gAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCt                                                                                                    <  1:2432570/100‑1 (MQ=255)
  aaGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCtt                                                                                                   <  2:664926/100‑1 (MQ=255)
   aGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTa                                                                                                  >  1:3282257/1‑100 (MQ=255)
   aGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTa                                                                                                  >  1:3282244/1‑100 (MQ=255)
    cattcctggattatggttgtaccgcaagcgccctcgcgtataaaattgcctcgcttaagCACACGGAGCAGAGGAGGCTGTCTCTCCTCCGTGTGCTTaa                                                                                                 >  2:2249902‑M1/60‑100 (MQ=255)
     aCATACTGGCTCTCAAATATTGAACTAGGACCGAGAAGGGAGTTAACGTTAATAGAAACACACCAACGAGAGCTGACTGTCTCTCATCCGTGTGCTTAAg                                                                                                >  1:667951/1‑100 (MQ=255)
      cATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGc                                                                                               >  1:489058/1‑100 (MQ=255)
       tcctggagtatggttgtaccgcaagcgccctcgcgtataaaattgcctcgcttaagCACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCg                                                                                              >  2:1450319‑M1/57‑100 (MQ=255)
               tctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtt                                                                                      <  1:462163/100‑1 (MQ=255)
               tctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtt                                                                                      <  2:2285516/100‑1 (MQ=255)
                ctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAttt                                                                                     >  2:878088/1‑100 (MQ=255)
                ctcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAttt                                                                                     <  1:292559/100‑1 (MQ=255)
                 tcAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAAtttt                                                                                    <  2:1516398/100‑1 (MQ=255)
                    aaTATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTtata                                                                                 <  2:2401828/100‑1 (MQ=255)
                     atatGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATAc                                                                                <  2:2834360/100‑1 (MQ=255)
                     atatGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATAc                                                                                <  1:1925184/100‑1 (MQ=255)
                          gAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAg                                                                           >  1:455860/1‑100 (MQ=255)
                              gATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGgcg                                                                       <  1:1542989/100‑1 (MQ=255)
                               aTGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGgcgc                                                                      >  1:44725/1‑100 (MQ=255)
                                  aaCGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTg                                                                   >  1:1253645/1‑100 (MQ=255)
                                   aCGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGc                                                                  <  2:2645258/100‑1 (MQ=255)
                                   aCGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGc                                                                  >  1:1977621/1‑100 (MQ=255)
                                   aCGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGc                                                                  >  2:785040/1‑100 (MQ=255)
                                    cGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCg                                                                 >  2:1044091/1‑100 (MQ=255)
                                    cGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCg                                                                 >  1:890830/1‑100 (MQ=255)
                                    cGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCg                                                                 >  1:1355924/1‑100 (MQ=255)
                                     gagaAGGGAGATAACTTTTATAGTAACACTCGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCgg                                                                <  2:473055/100‑1 (MQ=255)
                                     gagaAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCgg                                                                >  1:2782148/1‑100 (MQ=255)
                                     gagaAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCgg                                                                <  1:8689/100‑1 (MQ=255)
                                     gagaAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCgg                                                                <  2:1556879/100‑1 (MQ=255)
                                      agaAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGt                                                               <  2:1346136/100‑1 (MQ=255)
                                        aaGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTAc                                                             >  1:371447/1‑100 (MQ=255)
                                         aGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACa                                                            >  1:598401/1‑100 (MQ=255)
                                           ggAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAAc                                                          >  2:322963/1‑100 (MQ=255)
                                            gagaTAACTTTTATAGTAACACACGGAGGAGAGTAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATCTTATACGCGAGGGCGCTTGCGGTACAAcc                                                         >  1:2012283/1‑100 (MQ=255)
                                            gagaTAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAAcc                                                         >  2:411662/1‑100 (MQ=255)
                                            gagaTAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAAcc                                                         <  1:1394581/100‑1 (MQ=255)
                                            gagaTAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAAcc                                                         >  1:3159796/1‑100 (MQ=255)
                                              gaTAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCan                                                       <  2:1890441/100‑2 (MQ=255)
                                              caTAACTAATATAGTAACACACGGAGAAGAAGAGGCTGTCTCTCATCCGTATACTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCAt                                                       >  1:701845/2‑100 (MQ=255)
                                                tAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATaa                                                     >  1:2325859/1‑100 (MQ=255)
                                                  aCTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATc                                                   <  2:1085587/100‑1 (MQ=255)
                                                  aCTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATc                                                   <  2:2852370/100‑1 (MQ=255)
                                                   cTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATcc                                                  >  1:2468133/1‑100 (MQ=255)
                                                   cTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATcc                                                  <  1:1151742/100‑1 (MQ=255)
                                                    ttttATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATcaa                                                 <  2:1711775/100‑3 (MQ=255)
                                                    ttttATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCa                                                 <  2:110946/100‑1 (MQ=255)
                                                    ttttATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAg                                                <  2:154169/100‑1 (MQ=255)
                                                    cctcgcttaagcacacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCa                                                 >  1:2532440‑M2/48‑100 (MQ=255)
                                                     tttATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAGTCCAg                                                <  1:108535/100‑1 (MQ=255)
                                                     tttATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAg                                                <  2:351654/100‑1 (MQ=255)
                                                       cgcttaagcacacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGa                                              >  2:3206192‑M2/45‑100 (MQ=255)
                                                        ataGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGaa                                             >  1:213373/1‑100 (MQ=255)
                                                           gTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATgg                                          >  2:450182/1‑100 (MQ=255)
                                                           gTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATgg                                          <  2:496243/100‑1 (MQ=255)
                                                           gTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATgg                                          >  1:2972100/1‑100 (MQ=255)
                                                           gTAACACACGGAGGAGAGGAGGCTGTCTATCATCCGCGTGCTTAAGCGAGGCAATTGTATACTCGAAGGCGCTTGAGGTACAACCATAATCCAACAATg                                           >  1:3197523/1‑99 (MQ=255)
                                                           gTAACACACGGACGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATgg                                          >  2:2192547/1‑100 (MQ=255)
                                                             aaCACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGaa                                        >  2:2596711/1‑100 (MQ=255)
                                                             aaCACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCAAGGAATGGaa                                        >  1:229697/1‑100 (MQ=255)
                                                              acacacGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGaaa                                       <  1:781061/100‑1 (MQ=255)
                                                               cgCACGGAGGAGAAGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAg                                      <  2:2264799‑M1/98‑1 (MQ=255)
                                                               CACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAg                                      <  1:26519‑M1/100‑1 (MQ=255)
                                                                ACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGa                                     <  2:1782071‑M1/100‑1 (MQ=255)
                                                                 cacggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAc                                    >  2:1307306‑M2/35‑100 (MQ=255)
                                                                 CACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAc                                    <  2:271905‑M1/100‑1 (MQ=255)
                                                                  ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAcc                                   >  2:1516011‑M1/1‑100 (MQ=255)
                                                                  ACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGAcc                                   >  1:2596691‑M1/1‑100 (MQ=255)
                                                                   cggatgagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCg                                  >  2:1851287‑M2/33‑100 (MQ=255)
                                                                   CGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCg                                  <  2:1393530‑M1/100‑1 (MQ=255)
                                                                      AGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATg                               >  1:2264782‑M1/1‑100 (MQ=255)
                                                                      AGGAGAGGAGGCTGTCCCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATg                               <  1:2222223‑M1/100‑1 (MQ=255)
                                                                       ggagaggagGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATgg                              <  1:690002/100‑1 (MQ=255)
                                                                        gagagacagcctcctctcctccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACAGATGGa                             >  1:1591881‑M2/28‑100 (MQ=255)
                                                                            ggaggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAAc                         <  1:307016/100‑1 (MQ=255)
                                                                            ggaggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAAc                         <  1:571996/100‑1 (MQ=255)
                                                                            ggaggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAAc                         >  1:1632790/1‑100 (MQ=255)
                                                                            ggaggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAAc                         <  2:3282283/100‑1 (MQ=255)
                                                                            ggaggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAAc                         <  2:3282270/100‑1 (MQ=255)
                                                                            ggaggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAAc                         >  1:1802145/1‑100 (MQ=255)
                                                                               ggCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCa                      >  2:2073500/1‑100 (MQ=255)
                                                                                gCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCAc                     <  1:2328286/100‑1 (MQ=255)
                                                                                 cTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCAcc                    <  2:1461767/100‑1 (MQ=255)
                                                                                    tctctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACcaac                 <  2:890833/100‑1 (MQ=255)
                                                                                     ctctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACcaaca                >  1:98176/1‑100 (MQ=255)
                                                                                      tctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACcaacaa               >  2:2936913/1‑100 (MQ=255)
                                                                                       ctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAAt              >  2:3167009/1‑100 (MQ=255)
                                                                                       ctcATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAAt              >  1:2608416/1‑100 (MQ=255)
                                                                                         cATCCGTGTGCTTCAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCg            >  1:2075094/1‑100 (MQ=255)
                                                                                         cATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCg            <  1:1431587/100‑1 (MQ=255)
                                                                                           tccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGAt          <  1:271905‑M2/92‑1 (MQ=255)
                                                                                           tccgtgtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGAt          <  1:1286774‑M2/92‑1 (MQ=255)
                                                                                           tccgtgtgCTTAAGCGAGGCAATATTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGAt          >  2:2558027‑M2/9‑100 (MQ=255)
                                                                                                gtgCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGc     <  2:743600‑M2/97‑1 (MQ=255)
                                                                                                gtgCTTAAGCGAGGCAATTTTATACGCGAGGGAGCTTGCGGTACAAACATAGTCCAGGGATGGAAAGACGGATGGATAACGGACCAACAATCGATGAAg      >  2:584476‑M2/4‑99 (MQ=255)
                                                                                                  gCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCt    >  2:2825336‑M2/2‑99 (MQ=255)
                                                                                                  gCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTg   >  1:1072895‑M2/2‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGAAGACATACTGTTTCTCAAATATGGAACGATGAACGAGAAGGGAGATAACTTTTATAGTAACACACGGAGGAGAGGAGGCTGTCTCTCATCCGTGTGCTTAAGCGAGGCAATTTTATACGCGAGGGCGCTTGCGGTACAACCATAATCCAGGAATGGAAAGACCGATGGATAACGCACCAACAATCGATGAAGCTGT  >  NC_000913/4601509‑4601707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.