New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4602757 =125 (1.010)7 (0.060) 5/164 NT 6.1% coding (102/771 nt) yjjP DUF1212 family inner membrane protein
?NC_000913 4602785 = 101 (0.890)coding (74/771 nt) yjjP DUF1212 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 149 total aligned reads displayed.

GTCAGCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGTGCT  >  NC_000913/4602686‑4602884
                                                                                                   |                                                                                                   
caaactgagcaacagcgagccgtaacacggctttgtatccagtgtggattatttcttttgcaacatggtgcGGAAAGCTCATCAACCAACGCGCTTTCCg                                                                                                     >  1:1743061‑M1/72‑100 (MQ=255)
caaactgagcaacagcgagccgtaacacggctttgtatccagtgtggattatttcttttgcaacatggtgcGGAAAGCTCATCAACCAACGCGCTTTCCg                                                                                                     >  2:1473480‑M1/72‑100 (MQ=255)
 tCAGCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGc                                                                                                    <  2:904841/100‑1 (MQ=255)
  cAGCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCa                                                                                                   >  2:2906627/1‑100 (MQ=255)
  cAGCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCa                                                                                                   <  2:417880/100‑1 (MQ=255)
  aactgagcaacagcgagccgtaacacggctttgtatccagtgtggattatttcttttgcaacatggtgcGGAAAGCTCATCAACCAACGCGCTTTCCGCa                                                                                                   >  1:2452718‑M1/70‑100 (MQ=255)
    gCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCAcc                                                                                                 <  1:2919775/100‑1 (MQ=255)
         aTGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGtt                                                                                            <  1:11988/100‑1 (MQ=255)
           ggCGTTCGAAGAGATAGAACTTTCGTCGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGc                                                                                          <  1:1907101/100‑1 (MQ=255)
           ggCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGc                                                                                          <  2:1841789/100‑1 (MQ=255)
            gCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCa                                                                                         <  2:83149/100‑1 (MQ=255)
              gTTCGAAGAGCTAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCaaa                                                                                       >  1:1085963/1‑100 (MQ=255)
               ttCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCaaaa                                                                                      >  1:3184534/1‑100 (MQ=255)
                tCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAg                                                                                     >  2:1200802/1‑100 (MQ=255)
                 cGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGa                                                                                    <  2:1482579/100‑1 (MQ=255)
                 cGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGa                                                                                    >  1:2911287/1‑100 (MQ=255)
                 cGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGa                                                                                    <  2:2542008/100‑1 (MQ=255)
                 cGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGa                                                                                    <  2:2779323/100‑1 (MQ=255)
                 cGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGa                                                                                    >  2:446518/1‑100 (MQ=255)
                 agccgtaacacggctttgtatccagtgtggattatttcttttgcaacatggtgcGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGa                                                                                    >  2:2480081‑M1/55‑100 (MQ=255)
                  gAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGaa                                                                                   >  2:363816/1‑100 (MQ=255)
                   aaGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGaaa                                                                                  <  2:2291605/100‑1 (MQ=255)
                   aaGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGaaa                                                                                  <  2:3199646/100‑1 (MQ=255)
                   aaGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGaaa                                                                                  >  2:3217394/1‑100 (MQ=255)
                       gaTAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAaataat                                                                              <  2:1722219/100‑1 (MQ=255)
                        aTAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATc                                                                             <  1:2878617/100‑1 (MQ=255)
                        aTAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATc                                                                             <  1:2976189/100‑1 (MQ=255)
                        aTAGAACTTTCGACGCTGTCCATTCCCAGCGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATc                                                                             <  1:2019480/100‑1 (MQ=255)
                         tAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATcc                                                                            <  2:394332/100‑1 (MQ=255)
                         tAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATcc                                                                            <  1:749276/100‑1 (MQ=255)
                          aGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATcc                                                                            <  1:3238270/99‑1 (MQ=255)
                          aGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCca                                                                           >  1:2957984/1‑100 (MQ=255)
                            aaCTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCcaca                                                                         >  2:980914/1‑100 (MQ=255)
                             aCTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCacac                                                                        >  1:1435549/1‑100 (MQ=255)
                             aCTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCacac                                                                        >  2:3144222/1‑100 (MQ=255)
                              cTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACt                                                                       <  1:365533/100‑1 (MQ=255)
                               tttCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTg                                                                      <  1:2732121/100‑1 (MQ=255)
                                  cGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGAt                                                                   <  2:2439429/100‑1 (MQ=255)
                                  cGACGCTGTCCATTCCCAGTGACCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTACGCACCATGTTGCAAAAGAAATAATCCACACTGGAt                                                                   >  1:1884308/1‑100 (MQ=255)
                                     cGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACa                                                                <  2:593630/100‑1 (MQ=255)
                                     cGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACa                                                                <  2:1398235/100‑1 (MQ=255)
                                         gTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGc                                                            <  1:3038773/100‑1 (MQ=255)
                                          tCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGcc                                                           >  1:969069/1‑100 (MQ=255)
                                           tctttCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCg                                                          <  2:112384/97‑1 (MQ=255)
                                           ccATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCg                                                          >  1:726620/1‑100 (MQ=255)
                                            cATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgt                                                         >  2:292723/1‑100 (MQ=255)
                                            cATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgt                                                         >  2:250014/1‑100 (MQ=255)
                                             aTTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgtg                                                        <  2:2325669/100‑1 (MQ=255)
                                             aTTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgtg                                                        <  1:1068098/100‑1 (MQ=255)
                                              ttCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgtgt                                                       >  2:2615624/1‑100 (MQ=255)
                                              ttCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgaga                                                       >  1:112383/1‑97 (MQ=255)
                                              ttCCCAGTGCCCGACCCAGTCGTGAGAAAAGCTCATCAACCAACGCGATTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCgtgt                                                       <  2:2304574/100‑1 (MQ=255)
                                               tCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGtt                                                      <  1:535366/100‑1 (MQ=255)
                                               tCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGtt                                                      <  1:446518/100‑1 (MQ=255)
                                                 ccAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCCCCATGTTGCAAAAGAAATAATCCACACTGGCTACAAAGCCGTGTTAc                                                    >  2:1218033/1‑100 (MQ=255)
                                                 ccAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTAc                                                    >  2:2574845/1‑100 (MQ=255)
                                                 ccAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTAc                                                    >  1:2687191/1‑100 (MQ=255)
                                                  cAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACg                                                   >  2:1683655/1‑100 (MQ=255)
                                                   aGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACgg                                                  <  1:203455/100‑1 (MQ=255)
                                                    gTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGc                                                 >  2:564831/1‑100 (MQ=255)
                                                     tcttttgcaacatggtgcggaaagcgcgttggttgatgagctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCt                                                >  2:2480081‑M2/47‑100 (MQ=255)
                                                        ccGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGc                                             <  2:735538/100‑1 (MQ=255)
                                                         cGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCt                                            <  1:1317597/100‑1 (MQ=255)
                                                              cAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGc                                       >  1:818581/1‑100 (MQ=255)
                                                                gTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTc                                     <  2:1442621/100‑1 (MQ=255)
                                                                  cGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAg                                   >  1:2319903/1‑100 (MQ=255)
                                                                    tgcggaaagcgcgttggttgatgagctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGtt                                 >  1:2452718‑M2/32‑100 (MQ=255)
                                                                     gcggaaagcgcgttggttgatgagctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGttt                                >  2:2538861‑M2/31‑100 (MQ=255)
                                                                      aGGACAGCTCCTCAACCAACGCGCTTTCCGCACAATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTCTTACGGCTCGCTGTTGCTCAGTTTg                               <  2:671564/100‑1 (MQ=255)
                                                                       ggaaagcgcgttggttgatgagctttccTCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGc                              >  2:1790345‑M2/29‑100 (MQ=255)
                                                                       ggaaagcgcgttggttgatgagctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGc                              >  1:151767‑M2/29‑100 (MQ=255)
                                                                       GGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGc                              <  2:1046683‑M1/100‑1 (MQ=255)
                                                                       GGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGc                              <  2:976971‑M1/100‑1 (MQ=255)
                                                                       GGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGc                              <  2:1743695‑M1/100‑1 (MQ=255)
                                                                       GGAAAGCTCATCAACCAACGCGCTTTCCGCACCAGGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGGTACGGCTCGCTGTTGCTCAGTTTGc                              <  2:151783‑M1/100‑1 (MQ=255)
                                                                        GAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACGCTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCa                             >  1:164351‑M1/1‑100 (MQ=255)
                                                                        GAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCa                             <  2:1085065‑M1/100‑1 (MQ=255)
                                                                        GAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCa                             >  2:1572703‑M1/1‑100 (MQ=255)
                                                                         AAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCa                             <  1:372112‑M1/99‑1 (MQ=255)
                                                                         AAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCAt                            >  1:982054‑M1/1‑100 (MQ=255)
                                                                         AAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCAt                            >  2:1193678‑M1/1‑100 (MQ=255)
                                                                         AAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGCGTTACGGCTCGCTGTTGCTCAGTTTGCAt                            >  2:251930‑M1/1‑100 (MQ=255)
                                                                            GCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAAc                         <  1:1274525‑M1/100‑1 (MQ=255)
                                                                               catcaACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTc                       >  1:2266743/1‑99 (MQ=255)
                                                                               catcaACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCg                      >  2:148372/1‑100 (MQ=255)
                                                                                atcaACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGc                     <  1:3126053/100‑1 (MQ=255)
                                                                                atcaACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGc                     <  1:2764372/100‑1 (MQ=255)
                                                                                 tcaACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGcc                    <  2:593141/100‑1 (MQ=255)
                                                                                  caaccaacGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGccc                   <  2:1085966/100‑1 (MQ=255)
                                                                                   aaccaacGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCt                  >  2:1200895/1‑100 (MQ=255)
                                                                                    accaacGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCtt                 >  2:3277138/1‑100 (MQ=255)
                                                                                    accaacGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCtt                 <  2:1435555/100‑1 (MQ=255)
                                                                                       aacGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGt              >  2:713034/1‑100 (MQ=255)
                                                                                       aacGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGt              >  1:118983/1‑100 (MQ=255)
                                                                                         ngcgcTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCa            >  2:2732728/2‑100 (MQ=255)
                                                                                         cgcgCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCa            <  2:738575/100‑1 (MQ=255)
                                                                                            gctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAg         >  2:3055795‑M2/8‑100 (MQ=255)
                                                                                             ctttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGa        >  2:15169‑M2/7‑100 (MQ=255)
                                                                                               ttccGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACg      <  2:201131‑M2/96‑1 (MQ=255)
                                                                                                   gCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGtgct  >  2:2085803/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTCAGCACTATGGCGTTCGAAGAGATAGAACTTTCGACGCTGTCCATTCCCAGTGCCCGACCCAGTCGTGAGGAAAGCTCATCAACCAACGCGCTTTCCGCACCATGTTGCAAAAGAAATAATCCACACTGGATACAAAGCCGTGTTACGGCTCGCTGTTGCTCAGTTTGCATAACTCGCCCTTTGTCATAGACGTGCT  >  NC_000913/4602686‑4602884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.