New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 437120 =NA (NA)5 (0.040) 4/162 NT NA noncoding (1/37 nt) REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 437153 = NA (NA)noncoding (34/37 nt) REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences REP38 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 145 total aligned reads displayed.

GCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATA  >  NC_000913/437054‑437252
                                                                                                   |                                                                                                   
gCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGcc                                                                                                     <  2:1337131/100‑1 (MQ=255)
 cagattgccgaactggaaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCt                                                                                                    >  2:203513‑M1/66‑100 (MQ=255)
 cAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCt                                                                                                    <  2:740082/100‑1 (MQ=255)
  aGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTg                                                                                                   >  2:3249467/1‑100 (MQ=255)
  aGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTg                                                                                                   <  1:747880/100‑1 (MQ=255)
   ggCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCGCCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTgg                                                                                                  >  2:1812384/1‑100 (MQ=255)
   ggCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGATGCTTGTCACGTCTCATCAGGGCt                                                                                                    >  2:446667/1‑98 (MQ=255)
   ggCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTgg                                                                                                  >  1:2813204/1‑100 (MQ=255)
    gCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGa                                                                                                 >  2:2834765/1‑100 (MQ=255)
     cATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGAc                                                                                                <  1:1042911/100‑1 (MQ=255)
       tcttGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGAc                                                                                                <  2:930768/95‑1 (MQ=255)
        ccTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGActct                                                                                             >  2:215022/1‑100 (MQ=255)
        ccTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGActct                                                                                             >  2:1161502/1‑100 (MQ=255)
        ccTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGActct                                                                                             >  1:528034/1‑100 (MQ=255)
         cTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCtt                                                                                            >  1:3283109/1‑100 (MQ=255)
         cTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCtt                                                                                            >  2:3018642/1‑100 (MQ=255)
          tGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCACCAGGCCTGGACTCTTa                                                                                           <  1:2857591/100‑1 (MQ=255)
           gTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTAt                                                                                          <  1:779179/100‑1 (MQ=255)
              ttttATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTa                                                                                       <  1:1151435/100‑1 (MQ=255)
                ttATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTaaa                                                                                     >  1:1774316/1‑100 (MQ=255)
                ttATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTaaa                                                                                     <  2:1139650/100‑1 (MQ=255)
                 tATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAAt                                                                                    >  2:706493/1‑100 (MQ=255)
                 aaacgccgtataaaccgcatcctgtcgtaggatttaaataagagtccagGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGTCTCTTATTTAAAt                                                                                    >  1:15133‑M1/50‑100 (MQ=255)
                   tCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATcc                                                                                  <  2:528034/100‑1 (MQ=255)
                   tCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATcc                                                                                  <  1:3249441/100‑1 (MQ=255)
                   tCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATcc                                                                                  <  1:827785/100‑1 (MQ=255)
                     ggtgagcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTa                                                                                <  1:988915/94‑1 (MQ=255)
                     ggTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTa                                                                                <  2:2096855/100‑1 (MQ=255)
                     ggTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTa                                                                                >  1:294844/1‑100 (MQ=255)
                       tcatcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACg                                                                              <  1:2233830/100‑1 (MQ=255)
                       tcatcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACg                                                                              <  1:307924/100‑1 (MQ=255)
                        ggataaaccgcgtcctgtcgtaggatttaaataagagtccagGCTTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTAc                                                                               >  1:1771256‑M1/43‑98 (MQ=255)
                        catcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGa                                                                             >  2:2498370/1‑100 (MQ=255)
                         atcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGAc                                                                            >  2:2713104/1‑100 (MQ=255)
                          tcaCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACa                                                                           >  2:1537691/1‑100 (MQ=255)
                           caCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAg                                                                          >  1:797802/1‑100 (MQ=255)
                            aCTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAgg                                                                         >  2:3312325/1‑100 (MQ=255)
                                gCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGc                                                                     >  1:1952708/1‑100 (MQ=255)
                                gCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGc                                                                     >  2:761992/1‑100 (MQ=255)
                                 ccGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCg                                                                    <  2:1277437/100‑1 (MQ=255)
                                 ccGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCg                                                                    <  1:1272059/100‑1 (MQ=255)
                                   gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                                                  <  2:2143489/100‑1 (MQ=255)
                                   gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                                                  <  2:3003107/100‑1 (MQ=255)
                                   gCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGt                                                                  <  1:1128618/100‑1 (MQ=255)
                                    cTGGGTATTCTGTAGTAGTTGTGCACCGATGCTTGATGTGACGCTTGTAACGTCTCATGAGGACTGGCCTCTTCTTTAAACCCTACGACAGGCTGCGGtt                                                                 <  1:275724/100‑1 (MQ=255)
                                      gggTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTta                                                               <  2:1680204/100‑1 (MQ=255)
                                            tCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGc                                                         <  1:2841120/100‑1 (MQ=255)
                                            tCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGc                                                         <  1:2093727/100‑1 (MQ=255)
                                                atttaaataagagtccaggcctgatgagacgtgacaagcgtcacatcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGc                                                         >  1:15740‑M2/52‑96 (MQ=255)
                                                atttaaataagagaccaggcctgatgagacgtgacaagcgtcacatcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGttt                                                     >  1:15133‑M2/52‑100 (MQ=255)
                                                 cGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTc                                                    >  2:2530489/1‑100 (MQ=255)
                                                  gTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCCCGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTcc                                                   <  2:3348794/100‑1 (MQ=255)
                                                  gTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATCTAAATCCTACGACAGGATGCGGTTAATACGGCGTTTcc                                                   <  1:2063137/100‑1 (MQ=255)
                                                    aGTTGTTCACCTATGCCTGATGTGATGTTTGTTAGGTCTTATCAGGCCTGGTCTCTTATTTAAAGCCTACGACAGGATGCTTTTGATACTGCTTTTcc                                                   <  1:1992418/98‑1 (MQ=255)
                                                       tgtgCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTc                                              <  2:1452562/100‑1 (MQ=255)
                                                        gtgCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCg                                             >  1:3052449/1‑100 (MQ=255)
                                                         ctcACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCgg                                            <  1:226418/98‑1 (MQ=255)
                                                           cACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCggag                                          >  2:226419/1‑98 (MQ=255)
                                                           cACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCa                                          >  2:937615/1‑100 (MQ=255)
                                                           cACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCa                                          >  2:549150/1‑100 (MQ=255)
                                                             ccGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGGCAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAAt                                        >  1:2253225/1‑100 (MQ=255)
                                                               gATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCt                                      >  2:1007265/1‑100 (MQ=255)
                                                                 tGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGt                                    <  1:446667/100‑1 (MQ=255)
                                                                   nCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTc                                  <  2:30663‑M1/99‑1 (MQ=255)
                                                                   CCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTc                                  <  1:1196209‑M1/100‑1 (MQ=255)
                                                                   CCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTc                                  >  2:1958300‑M1/1‑100 (MQ=255)
                                                                        TGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCt                             <  1:83048‑M1/100‑1 (MQ=255)
                                                                        TGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCt                             <  2:2418748‑M1/100‑1 (MQ=255)
                                                                        TGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCt                             >  2:1274605‑M1/1‑100 (MQ=255)
                                                                          tgACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTc                           >  1:2435126/1‑100 (MQ=255)
                                                                            atgCTTGTCACGTCTCATCAGGCCTGGACTCGTATTTAAATCATACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCaa                         >  2:2262106/3‑100 (MQ=255)
                                                                            aCGCTTGTCACGTCTCATCAGGCCTGGTCTCTTATTTAAATCCTCCGACAGGATGCGGTTTATTCGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCaa                         <  1:1075401/100‑1 (MQ=255)
                                                                            aCGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCaa                         >  2:2530926/1‑100 (MQ=255)
                                                                             cGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTGATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCa                          <  2:3283135/98‑1 (MQ=255)
                                                                               cTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGt                      >  1:1778384/1‑100 (MQ=255)
                                                                               cTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGt                      <  2:1774327/100‑1 (MQ=255)
                                                                               cTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGt                      <  2:1140322/100‑1 (MQ=255)
                                                                               cTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCCGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGt                      <  1:1859963/100‑1 (MQ=255)
                                                                               cTTGTCACGTCTCATCAGGCCTGGACTCTTATGTAAATCATATGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGt                      <  1:2349597/100‑1 (MQ=255)
                                                                                 tGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGa                    <  2:1218543/100‑1 (MQ=255)
                                                                                  gTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGat                   <  2:2072858/100‑1 (MQ=255)
                                                                                   tCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGata                  <  2:1308150/100‑1 (MQ=255)
                                                                                   tCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGata                  >  1:489207/1‑100 (MQ=255)
                                                                                      cGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATcc               >  2:2865692/1‑100 (MQ=255)
                                                                                       gTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCa              >  1:1594427/1‑100 (MQ=255)
                                                                                        tctcATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCAc             >  1:1886612/1‑100 (MQ=255)
                                                                                         ctcATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGTCAATCTGTTCCGGCTTCAAAGTGATATCCAcc            >  2:858543/1‑100 (MQ=255)
                                                                                          tcatcaGGCCTGGACTCTTATTTAAATCCGACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACcg           <  2:316211/100‑1 (MQ=255)
                                                                                           catcagtcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACcgc          <  2:1449792‑M2/92‑1 (MQ=255)
                                                                                             tcaggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGt        >  2:2299005‑M2/7‑100 (MQ=255)
                                                                                               aggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTc      <  1:1071913‑M2/96‑1 (MQ=255)
                                                                                               aggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTc      <  2:3056433‑M2/96‑1 (MQ=255)
                                                                                               aggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTc      <  1:389649‑M2/96‑1 (MQ=255)
                                                                                               aggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTc      >  1:3139441‑M2/5‑100 (MQ=255)
                                                                                                ggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTc      >  2:1221846‑M2/4‑99 (MQ=255)
                                                                                                ggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCa     >  2:2686084‑M2/4‑100 (MQ=255)
                                                                                                ggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCa     >  1:2894557‑M2/4‑100 (MQ=255)
                                                                                                ggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCa     >  2:1894823‑M2/4‑100 (MQ=255)
                                                                                                ggcCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCa     >  2:3019163‑M2/4‑100 (MQ=255)
                                                                                                   cTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATa  <  2:404073/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAGTTGTGCACCGATGCCTGATGTGACGCTTGTCACGTCTCATCAGGCCTGGACTCTTATTTAAATCCTACGACAGGATGCGGTTTATACGGCGTTTCCAGTTCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATA  >  NC_000913/437054‑437252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.