New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4063563NA (NA)10 (0.080) 6/164 NT NA noncoding (45/75 nt) REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4063593 NA (NA)noncoding (75/75 nt) REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences REP296 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 169 total aligned reads displayed.

TAAGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGAC  >  NC_000913/4063464‑4063662
                                                                                                   |                                                                                                   
tAAGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAg                                                                                                     >  1:1819437/1‑100 (MQ=255)
  aGCGTATTAGCCGACGTAAGAAAGAGATGCTGGCGGGTGAAGCTTAATTTATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgc                                                                                                   <  2:839882‑M1/100‑3 (MQ=255)
  aGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgc                                                                                                   >  2:265251‑M1/1‑98 (MQ=255)
  aGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgc                                                                                                   <  2:887347‑M1/100‑3 (MQ=255)
  aGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgc                                                                                                   >  2:2909615‑M1/1‑98 (MQ=255)
       aTTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggat                                                                                              <  1:1017558‑M1/100‑8 (MQ=255)
        ttAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccgga                                                                                               <  2:3715305‑M1/98‑7 (MQ=255)
          aGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAg                                                                                           >  2:982487/1‑100 (MQ=255)
           gCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAgg                                                                                          <  2:2683957/100‑1 (MQ=255)
           gCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAgg                                                                                          >  2:2010058/1‑100 (MQ=255)
           gCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAgg                                                                                          <  1:2010048/100‑1 (MQ=255)
            ccAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGc                                                                                         >  2:1443844/1‑100 (MQ=255)
            ccAACGTAAGAAAGAGACGCGCGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAgg                                                                                          <  1:3211777/99‑1 (MQ=255)
             cAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCg                                                                                        <  1:165606/100‑1 (MQ=255)
             cAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCg                                                                                        >  2:1340152/1‑100 (MQ=255)
              aaCGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGt                                                                                       <  2:2443661/100‑1 (MQ=255)
               aCGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGtt                                                                                      <  2:692357/100‑1 (MQ=255)
                cGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGttt                                                                                     >  1:602190/1‑100 (MQ=255)
                 gTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTa                                                                                    <  1:1424976/100‑1 (MQ=255)
                 gTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTa                                                                                    >  1:2815258/1‑100 (MQ=255)
                  tAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAc                                                                                   >  1:3001727/1‑100 (MQ=255)
                   aagaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGTGTTTAcg                                                                                  <  2:1955488/100‑1 (MQ=255)
                   aagaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcg                                                                                  <  2:2611391/100‑1 (MQ=255)
                    agaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTGATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgc                                                                                 >  1:3552827/1‑100 (MQ=255)
                     gaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgcc                                                                                >  2:1587806/1‑100 (MQ=255)
                     gaaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgcc                                                                                >  2:963/1‑100 (MQ=255)
                      aaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgccg                                                                               <  1:2256864/100‑1 (MQ=255)
                      aaagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgccg                                                                               >  1:492533/1‑100 (MQ=255)
                       aagaGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTAcgccgc                                                                              >  1:2544853/1‑100 (MQ=255)
                           gaTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatcc                                                                          <  2:478648‑M1/100‑28 (MQ=255)
                           gaTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatcc                                                                          <  1:256507‑M1/100‑28 (MQ=255)
                           gaTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCC                                                                          <  1:768302‑M2/100‑1 (MQ=255)
                            aTGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCG                                                                         <  2:3222609‑M2/100‑1 (MQ=255)
                             tGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatccgg                                                                        <  2:1897829‑M1/100‑30 (MQ=255)
                              gCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAGAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatccggc                                                                       <  1:49427‑M1/100‑31 (MQ=255)
                              gCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatccggc                                                                       <  1:3282559‑M1/100‑31 (MQ=255)
                              gCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatccggc                                                                       >  2:3169413‑M1/1‑70 (MQ=255)
                              gCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatccggc                                                                       <  1:3169391‑M1/100‑31 (MQ=255)
                               cTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGTCGTTTACGCCGCATCCGGCa                                                                      <  1:2277828/100‑1 (MQ=255)
                               cTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGCATAAGGCGTTTACGCCGCATCCcgca                                                                      <  1:3548830‑M2/100‑5 (MQ=255)
                                tGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAg                                                                     >  1:2739378/1‑100 (MQ=255)
                                tGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAg                                                                     >  1:192463/1‑100 (MQ=255)
                                  gcggcTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGgccggatgcggcgtaaacgccttatccggcctac                                                                   <  1:2107025‑M1/100‑35 (MQ=255)
                                  gcggcTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGtt                                                                   <  1:12184/100‑1 (MQ=255)
                                      cTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTcac                                                               <  2:478312/100‑1 (MQ=255)
                                       tGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTcaca                                                              >  1:805188/1‑100 (MQ=255)
                                        gAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTcaca                                                              <  2:3128701/99‑1 (MQ=255)
                                        gAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACAt                                                             <  1:1220885/100‑1 (MQ=255)
                                         aaGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAACCCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATc                                                            <  1:1850715/100‑1 (MQ=255)
                                          aGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCa                                                           >  1:733159/1‑100 (MQ=255)
                                           gCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCag                                                          <  2:1126189/100‑1 (MQ=255)
                                            cTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCaga                                                         <  2:1055965/100‑1 (MQ=255)
                                             ttaattaaTGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCagca                                                        >  1:1321978/1‑98 (MQ=255)
                                                    atGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATAc                                                 >  2:3241190/1‑100 (MQ=255)
                                                    atGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCATAGGCCTGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATAc                                                 >  2:1834114/1‑100 (MQ=255)
                                                        ccGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCg                                             <  2:112729/100‑1 (MQ=255)
                                                        ccGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCg                                             <  2:2678667/100‑1 (MQ=255)
                                                          ggATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTc                                           <  1:509488/100‑1 (MQ=255)
                                                           gattaagcacaTCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTCCGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTcc                                          >  1:2617278/11‑100 (MQ=37)
                                                            aTGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTccc                                         <  2:3285760/100‑1 (MQ=255)
                                                               tgCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGAt                                      <  1:3091823/100‑1 (MQ=255)
                                                                gCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATa                                     >  1:3007254/1‑100 (MQ=255)
                                                                gCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATa                                     >  1:3602287/1‑100 (MQ=255)
                                                                gCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATa                                     >  1:1108233/1‑100 (MQ=255)
                                                                 cTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATAc                                    >  2:2324536/1‑100 (MQ=255)
                                                                  ttAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACg                                   >  1:2146425/1‑100 (MQ=255)
                                                                    aaTCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATACGGCAGTTTCACATCAGAAGAAATCCTTCGTCCCGATACgg                                  >  2:1505269/1‑99 (MQ=255)
                                                                       ccGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATc                               <  2:505288/99‑1 (MQ=255)
                                                                        cGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTg                             >  2:3179093/1‑100 (MQ=255)
                                                                         ggCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTgg                            >  2:1825803/1‑100 (MQ=255)
                                                                          gCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGt                           >  2:160833/1‑100 (MQ=255)
                                                                          gCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGt                           <  2:2830492/100‑1 (MQ=255)
                                                                          gCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGt                           <  1:1340147/100‑1 (MQ=255)
                                                                            tctcGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGttt                         <  1:982630/97‑1 (MQ=255)
                                                                            cAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGttt                         <  1:2999905/100‑1 (MQ=255)
                                                                            cAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGttt                         >  1:2341027/1‑100 (MQ=255)
                                                                            cAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGttt                         >  2:2269066/1‑100 (MQ=255)
                                                                             aaCGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGtttt                        >  2:3569074/1‑100 (MQ=255)
                                                                              aCGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTg                       <  2:3639901/100‑1 (MQ=255)
                                                                               cGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGc                      >  2:147236/1‑100 (MQ=255)
                                                                               cGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGc                      <  2:537272/100‑1 (MQ=255)
                                                                                gAAAACTGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCt                     <  1:1078378/100‑1 (MQ=255)
                                                                                gAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCt                     >  2:3305889/1‑100 (MQ=255)
                                                                                    aCCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacggttgatacggttttcgttggccggattaagcacatccggccattaatta                 <  2:1730102‑M2/100‑55 (MQ=255)
                                                                                     ccGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCgg                <  2:1692631/100‑1 (MQ=255)
                                                                                     ccGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCgg                <  1:3090930/100‑1 (MQ=255)
                                                                                      cggaTCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCggt               <  1:1534188/97‑1 (MQ=255)
                                                                                       gTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCggt               >  1:3456553/1‑99 (MQ=255)
                                                                                        tATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCggtgg             <  2:805193/100‑1 (MQ=255)
                                                                                          tCAACGGTAGGCCGGATAAGGCGTTTGCGCCGCAGCCGGCAGTTTCGCATCAGAAGAAGTACTTGGTCCCGATACGGATCTGGTTTTGCTCGCggtggt            <  1:1493126/99‑1 (MQ=37)
                                                                                          tCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTa           >  2:2490472/1‑100 (MQ=255)
                                                                                           cAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTAc          <  2:217008/100‑1 (MQ=255)
                                                                                                gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacggttgatacggttttcgttggccggattaagcacatccggccattaattaagcttcagccgc     <  1:2107025‑M2/100‑67 (MQ=255)
                                                                                                gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTc     <  1:267531/100‑1 (MQ=255)
                                                                                                gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTc     >  1:1470037/1‑100 (MQ=255)
                                                                                                gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTc     >  2:2267721/1‑100 (MQ=255)
                                                                                                gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTc     <  1:267532/100‑1 (MQ=255)
                                                                                                 tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCg    <  2:3001749/100‑1 (MQ=255)
                                                                                                  aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGa   >  2:3503202/1‑100 (MQ=255)
                                                                                                  aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGa   <  1:963/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TAAGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAATTAATGGCCGGATGTGCTTAATCCGGCCAACGAAAACCGTATCAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTTCACATCAGAAGAAATACTTCGTCCCGATACGGATCTGGTTTTGCTCGCGGTGGTACGGTTCGAC  >  NC_000913/4063464‑4063662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.