New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1508794NA (NA)7 (0.060) 7/166 NT NA noncoding (4/33 nt) REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 1508823 NA (NA)noncoding (33/33 nt) REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences REP117 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 155 total aligned reads displayed.

TAAGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCAAACC  >  NC_000913/1508696‑1508893
                                                                                                  |                                                                                                   
  aGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgcc                                                                                                  <  1:585236‑M1/100‑4 (MQ=255)
    tCCGGATGAGCTGCTGAAAACATTGCCGAAGCTAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccg                                                                                                 <  1:401480‑M1/99‑5 (MQ=255)
      cGGATGCGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTATGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCggg                                                                                               >  1:1490969/1‑99 (MQ=255)
       ggATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTa                                                                                             >  2:407503/1‑100 (MQ=255)
           gAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGc                                                                                         <  2:3623938/100‑1 (MQ=255)
            aGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGGTTTCTGTTTACTAACAACTTATTGAATCTGACTGATATTGCCTGCCGGGTACGGc                                                                                         >  1:1169051/1‑99 (MQ=255)
              ctgctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGtt                                                                                      <  1:3480833/100‑1 (MQ=255)
               tgctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTa                                                                                     >  2:557327/1‑100 (MQ=255)
                gctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAc                                                                                    >  1:3005512/1‑100 (MQ=255)
                gctgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAc                                                                                    <  2:3079123/100‑1 (MQ=255)
                  tgAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgc                                                                                  <  2:756759/100‑1 (MQ=255)
                   gAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgcc                                                                                 >  1:1607727/1‑100 (MQ=255)
                   gAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgcc                                                                                 >  1:1899571/1‑100 (MQ=255)
                   gAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgcc                                                                                 >  2:2878062/1‑100 (MQ=255)
                     aaaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgccgc                                                                               <  2:2796680/100‑1 (MQ=255)
                     aaaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgccgc                                                                               >  2:3002960/1‑100 (MQ=255)
                     aaaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgccgc                                                                               >  2:3303585/1‑100 (MQ=255)
                      aaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCa                                                                              >  1:2206862/1‑100 (MQ=255)
                      aaCATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTAATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTAcgc                                                                                  >  1:1701441/1‑96 (MQ=255)
                          ttGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCG                                                                          >  2:1522935‑M2/1‑100 (MQ=255)
                           tGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacccgg                                                                         <  2:3528377‑M1/100‑29 (MQ=255)
                           tGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGG                                                                         <  2:3204551‑M2/100‑1 (MQ=255)
                            gCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacccggc                                                                        <  1:3185710‑M1/100‑30 (MQ=255)
                            gCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGC                                                                        >  2:1671161‑M2/1‑100 (MQ=255)
                             ccGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGC                                                                        >  2:799748‑M2/1‑99 (MQ=255)
                              ngAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCAt                                                                      >  1:2488323/2‑100 (MQ=255)
                               gAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacccggcagg                                                                     <  1:2157551‑M1/100‑33 (MQ=255)
                                aaGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacccggcaggc                                                                    <  2:1746533‑M1/100‑34 (MQ=255)
                                aaGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCa                                                                    <  2:3005534/100‑1 (MQ=255)
                                   cGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAAt                                                                 >  1:3579424/1‑100 (MQ=255)
                                   cGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAAt                                                                 >  1:217481/1‑100 (MQ=255)
                                    gAAAAGGGTAAAACGCCAGTTTTCTGGTTTCTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATg                                                                >  1:270173/1‑100 (MQ=255)
                                    gAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATg                                                                >  2:2254672/1‑100 (MQ=255)
                                      aaaGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGAc                                                              >  1:2736349/1‑100 (MQ=255)
                                      aaaGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGAc                                                              >  1:596334/1‑100 (MQ=255)
                                      aaaGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGAc                                                              <  2:2027500/100‑1 (MQ=255)
                                         gggTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTgccggatgcggcgtaacgccttacccggcaggcaatatcatg                                                           <  2:121842‑M1/100‑43 (MQ=255)
                                          ggTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCaa                                                          >  2:315012/1‑100 (MQ=255)
                                           gTAAACCGCCCGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATCTTGCCTGCCGGGTAAGGCGTTCCGCCGCATCAGGCATCAAATGACTCAAc                                                         >  1:289478/1‑100 (MQ=255)
                                           gTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAAc                                                         >  1:967013/1‑100 (MQ=255)
                                            tAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACg                                                        <  2:954799/100‑1 (MQ=255)
                                            tAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACg                                                        >  2:3346170/1‑100 (MQ=255)
                                            tAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACg                                                        >  1:3135726/1‑100 (MQ=255)
                                              aaaCGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGtt                                                      >  1:1295418/1‑100 (MQ=255)
                                              aaaCGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGtt                                                      >  2:269110/1‑100 (MQ=255)
                                                 cGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAACTGACTCAACGTTGt                                                    <  1:453501/99‑1 (MQ=255)
                                                   ccAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTccc                                                 >  1:2500234/1‑100 (MQ=255)
                                                    cAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCg                                                >  1:1944457/1‑100 (MQ=255)
                                                    cAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCg                                                >  2:2923928/1‑100 (MQ=255)
                                                      gTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCt                                              <  2:260864/100‑1 (MQ=255)
                                                      gTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCt                                              <  2:3593175/100‑1 (MQ=255)
                                                      gTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCt                                              <  2:3262799/100‑1 (MQ=255)
                                                      gTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCt                                              <  2:3262109/100‑1 (MQ=255)
                                                      gTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCATGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCt                                              >  2:2739341/1‑100 (MQ=255)
                                                         ttCTGGTTTCTCACAACTTATTGAATCTGCATTATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCt                                           <  1:3729972/100‑1 (MQ=255)
                                                         ttCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCt                                           <  2:2439604/100‑1 (MQ=255)
                                                          tCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTG                                          >  2:2870847‑M1/1‑100 (MQ=255)
                                                          tCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTG                                          <  1:1051054‑M1/100‑1 (MQ=255)
                                                           cTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGG                                         <  1:2545528‑M1/100‑1 (MQ=255)
                                                              gTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTT                                      >  2:2710947‑M1/1‑100 (MQ=255)
                                                               ttACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTG                                     <  2:3731726‑M1/100‑1 (MQ=255)
                                                               ttACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTG                                     <  2:1903825‑M1/100‑1 (MQ=255)
                                                                tACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGC                                    <  1:3602854‑M1/100‑1 (MQ=255)
                                                                 aCTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCG                                   <  1:2254661‑M1/100‑1 (MQ=255)
                                                                 aCTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCG                                   <  2:1242656‑M1/100‑1 (MQ=255)
                                                                  cTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGC                                  <  1:3276218‑M1/100‑1 (MQ=255)
                                                                   ttccgatctattgaatcTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCG                                   <  2:449831‑M1/90‑1 (MQ=255)
                                                                    cacaCCTTATTGAATCTGCATGATATTGCCTGCCGTGTAAGACGTTACGCCGCATCCGGCATCAAATGAACCAACGTTGTACCCCTTCTGGTTTGCGCG                                 >  1:3437418‑M1/1‑99 (MQ=255)
                                                                    cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGA                                >  2:574622‑M1/1‑100 (MQ=255)
                                                                    cacaACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGC                                  >  1:713663‑M1/1‑98 (MQ=255)
                                                                      caACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAtt                              <  1:1682587/100‑1 (MQ=255)
                                                                         cTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAttttt                           <  2:529589/100‑1 (MQ=255)
                                                                          ttATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTg                          <  1:2923909/100‑1 (MQ=255)
                                                                            aTTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGcc                        <  1:1600120/100‑1 (MQ=255)
                                                                            aTTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGcc                        >  1:505798/1‑100 (MQ=255)
                                                                            aTTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGAGAtcggaaga                        >  1:449604/1‑93 (MQ=255)
                                                                            aTTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGAGAtcggaaga                        >  1:449829/1‑93 (MQ=255)
                                                                              tGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAg                      <  1:2374134/100‑1 (MQ=255)
                                                                                aaTCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTa                    <  2:1438426/100‑1 (MQ=255)
                                                                                    tGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTaaaaa                <  1:3565801/100‑1 (MQ=255)
                                                                                      cATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgttttaccc              <  2:121842‑M2/100‑59 (MQ=255)
                                                                                        tGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCt            <  1:1733177‑M2/100‑2 (MQ=255)
                                                                                        tGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCt            >  2:1832935‑M2/1‑99 (MQ=255)
                                                                                        tGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCt            <  2:1919408‑M2/100‑2 (MQ=255)
                                                                                         gATATTGCCTGCCGGGTAAGGCGTTACGCCGCGTCCGGCATCAAATGACTCAACGTTGTCCGGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCt            >  1:2597939‑M2/1‑98 (MQ=255)
                                                                                           tatTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgc         >  1:3280587‑M2/1‑96 (MQ=255)
                                                                                           tatTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgc         <  2:2958565‑M2/100‑5 (MQ=255)
                                                                                            atTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgcg        >  2:2059670‑M2/1‑95 (MQ=255)
                                                                                            atTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgcg        >  1:778715‑M2/1‑95 (MQ=255)
                                                                                              tgcctgccGGGTAAGGCGTTACGCCGCATCCGGCaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgttttacccttttcgct      <  1:2416404‑M2/100‑67 (MQ=255)
                                                                                              tgcctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAgcatttttactggcaaaaatcgcgca      <  2:885775‑M1/100‑27 (MQ=255)
                                                                                              tgcctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAgcatttttactggcaaaaatcgcgca      <  2:885776‑M1/100‑27 (MQ=255)
                                                                                               gcctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgcgcaa     <  2:2718277‑M2/100‑9 (MQ=255)
                                                                                                cctgccGGGTAAGGCGTTACGCCGCATCCGGCaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgttttacccttttcgcttc    <  1:2157551‑M2/100‑69 (MQ=255)
                                                                                                cctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgcgcaaa    >  1:1537915‑M2/1‑91 (MQ=255)
                                                                                                 ctgccGGGTAAGGCGTTACGCCGCATCCGGCaggcaatatcatgcagattcaataagttgtgagtaaccagaaaactggcgttttgcccttttcgcttcg   <  1:2546901‑M2/100‑70 (MQ=255)
                                                                                                 ctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAgcatttttactggcaaaaatcgcgcaaac   <  1:2521968‑M1/100‑30 (MQ=255)
                                                                                                 ctgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCtcgcgcaaac   >  2:2301299‑M2/1‑90 (MQ=255)
                                                                                                  tgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAgcatttttactggcaaaaatcgcgcaaacc  <  1:1345559‑M1/100‑31 (MQ=255)
                                                                                                  tgccGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGAgcatttttactggcaaaaatcgcgcaaacc  <  2:1607734‑M1/100‑31 (MQ=255)
                                                                                                  |                                                                                                   
TAAGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAAAACGCCAGTTTTCTGGTTACTCACAACTTATTGAATCTGCATGATATTGCCTGCCGGGTAAGGCGTTACGCCGCATCCGGCATCAAATGACTCAACGTTGTCCCGCTTCTGGTTTGCGCGATTTTTGCCAGTAAAAATGCTCGCGCAAACC  >  NC_000913/1508696‑1508893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.