New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1736030NA (NA)6 (0.050) 4/168 NT NA noncoding (48/74 nt) REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 1736054 NA (NA)noncoding (72/74 nt) REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 144 total aligned reads displayed.

AATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGT  >  NC_000913/1735931‑1736128
                                                                                                   |                                                                                                  
aaTTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGt                                                                                                    >  2:385538/1‑100 (MQ=255)
 aTTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTc                                                                                                   >  2:1519308‑M1/1‑99 (MQ=255)
  ttCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTcg                                                                                                  <  1:2371549‑M1/100‑3 (MQ=255)
  ttCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTcg                                                                                                  <  1:2371352‑M1/100‑3 (MQ=255)
   tCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTcgg                                                                                                 <  1:1326156‑M1/100‑4 (MQ=255)
       aGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATaa                                                                                             >  2:1011030/1‑100 (MQ=255)
        gCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAg                                                                                            <  2:1774613/100‑1 (MQ=255)
         cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAgg                                                                                           >  2:1205926/1‑100 (MQ=255)
         cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAgg                                                                                           <  2:2276350/100‑1 (MQ=255)
         cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAgg                                                                                           >  2:3224929/1‑100 (MQ=255)
         cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAgg                                                                                           >  1:1019962/1‑100 (MQ=255)
         cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAgg                                                                                           >  1:3405166/1‑100 (MQ=255)
          gAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGc                                                                                          >  1:2535773/1‑100 (MQ=255)
          gAAAAATCTCGCTGCATAATAACTGATGGCAAATGCACCATCGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAgg                                                                                           <  1:1671934/99‑1 (MQ=255)
           aaaaaTCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCa                                                                                         <  2:2046589/100‑1 (MQ=255)
           aaaaaTCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCa                                                                                         >  1:1987363/1‑100 (MQ=255)
             aaaTCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACt                                                                                       <  2:1027953/100‑1 (MQ=255)
                tctcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcgc                                                                                    >  2:2597742/1‑100 (MQ=255)
                 ctcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcgcc                                                                                   <  1:2499580/100‑1 (MQ=255)
                        cATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCG                                                                            >  2:1220841‑M2/1‑100 (MQ=255)
                        cATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCG                                                                            >  2:1220796‑M2/1‑100 (MQ=255)
                        cATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCG                                                                            >  2:225546‑M2/1‑100 (MQ=255)
                        cATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCG                                                                            >  2:1220082‑M2/1‑100 (MQ=255)
                          taataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGc                                                                          <  1:2826218/100‑1 (MQ=255)
                             taaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAg                                                                       >  1:1339549/1‑100 (MQ=255)
                              aaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGa                                                                      <  2:2098804/100‑1 (MQ=255)
                                 tGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATaa                                                                   >  2:671865/1‑100 (MQ=255)
                                  gATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATaaa                                                                  <  2:566829/100‑1 (MQ=255)
                                  gATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATaaa                                                                  >  2:3726960/1‑100 (MQ=255)
                                  gATGGCAAATGCAGCATTGCCCGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATaaa                                                                  >  2:2861038/1‑100 (MQ=255)
                                   aTGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTcggatgcggcgagtgccttatccgacctacatcga                                                                 >  1:2090819‑M1/1‑65 (MQ=255)
                                     ggCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCg                                                               >  1:3269629/1‑100 (MQ=255)
                                     ggCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCg                                                               >  1:18560/1‑100 (MQ=255)
                                      gCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGc                                                              <  1:1424162/100‑1 (MQ=255)
                                       cAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCa                                                             <  1:2767354/100‑1 (MQ=255)
                                        aaaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCAc                                                            <  2:2497320/100‑1 (MQ=255)
                                        aaaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCAc                                                            <  2:3527711/100‑1 (MQ=255)
                                         aaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACg                                                           <  2:1705557/100‑1 (MQ=255)
                                           tGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGtt                                                         >  2:2789598/1‑100 (MQ=255)
                                            gcagcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGt                                                          >  1:2269711/1‑98 (MQ=255)
                                            gcagcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTg                                                        <  1:1494306/100‑1 (MQ=255)
                                              agcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTc                                                      >  1:3140254/1‑100 (MQ=255)
                                              agcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTc                                                      <  1:438497/100‑1 (MQ=255)
                                               gcaTTGCCTGAAGCGCTACGCTTATCAGGCTTACGATGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCa                                                     <  2:46853/100‑1 (MQ=255)
                                               gcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATTTATGTAGGTCGGAGAATACACTCGCCGCATCCGGCAAGATGAATCGCACGTTGTc                                                      >  1:3167702/1‑99 (MQ=37)
                                               gcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCa                                                     <  2:3393594/100‑1 (MQ=255)
                                                caTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAg                                                    >  2:2200157/1‑100 (MQ=255)
                                                caTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAg                                                    >  1:1284915/1‑100 (MQ=255)
                                                 aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                                                   >  2:95470/1‑100 (MQ=255)
                                                 aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                                                   <  1:2764128/100‑1 (MQ=255)
                                                 aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                                                   >  1:1083566/1‑100 (MQ=255)
                                                 aTTGCCTGAAGAGCTACGGTTATCAGGCCTACGCGGATCATCGATGTCGGTCGGCTAAGGCCCTCGCCGCATCCGGCAACATAAATCGCACGGTCTCAGc                                                   >  1:3440885/1‑100 (MQ=255)
                                                  ttGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTcggatgcggcgagtgccttatccgacctacatcgatgatccgcgtaggcc                                                  <  2:2090829‑M1/100‑51 (MQ=255)
                                                  ttGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                                                   >  2:2424998/1‑99 (MQ=255)
                                                  ttGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCa                                                  <  2:2138264/100‑1 (MQ=255)
                                                    gCCTGAAGTGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAAc                                                >  2:1370365/1‑100 (MQ=255)
                                                    gCCTGAAGCGCTACGCTTATCAGGCCTATGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAAc                                                <  2:342573/100‑1 (MQ=255)
                                                    gCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTcggatgcggcgagtgccttatccgacctacatcgatgatccgcgtaggcctg                                                <  1:1338013‑M1/100‑53 (MQ=255)
                                                    gCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAAc                                                <  1:1519301/100‑1 (MQ=255)
                                                     ccTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACt                                               >  1:2127568/1‑100 (MQ=255)
                                                          aGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAAc                                          >  2:2056252/1‑100 (MQ=255)
                                                          aGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAAc                                          >  2:1018023/1‑100 (MQ=255)
                                                            cgcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGc                                        <  1:527879/100‑1 (MQ=255)
                                                              cTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAg                                      >  1:605252/1‑100 (MQ=255)
                                                                 cGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAg                                   >  2:498566/1‑100 (MQ=255)
                                                                 cGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAg                                   >  2:498452/1‑100 (MQ=255)
                                                                  gCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAgg                                  >  2:263183/1‑100 (MQ=255)
                                                                  gCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAgg                                  >  1:1346896/1‑100 (MQ=255)
                                                                   cTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGt                                 <  1:1120253/100‑1 (MQ=255)
                                                                   cTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGt                                 <  1:1245412/100‑1 (MQ=255)
                                                                     tATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTa                               >  1:2747926/1‑100 (MQ=255)
                                                                        cAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATcc                            >  2:1134043/1‑100 (MQ=255)
                                                                         aGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCt                           >  2:3623412/1‑100 (MQ=255)
                                                                          ggCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCtt                          >  1:2662623/1‑100 (MQ=255)
                                                                          ggCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCtt                          >  2:2081892/1‑100 (MQ=255)
                                                                          ggCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCtt                          >  1:1716451/1‑100 (MQ=255)
                                                                            ccTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGATaacagatc                        >  2:1164830/1‑93 (MQ=255)
                                                                              tACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGc                      >  2:3007012/1‑100 (MQ=255)
                                                                               aCGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGATAACCTTCTGCg                     <  1:3274652/100‑1 (MQ=255)
                                                                                cgcgGATCATCGCTGTAGATCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGATAACCTTCTGCGt                    <  1:3605328/100‑1 (MQ=255)
                                                                                cgcgGATCATCGATGTAGGTCGGATAAGTCACTCCCCGCATCCGGCAAGATAAATCGCACGGTGTCAGCAACTGTAACGCAGAAGGCTAACCTTCTGCGt                    <  1:2306367/100‑1 (MQ=255)
                                                                                cgcgGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGt                    >  2:3581690/1‑100 (MQ=255)
                                                                                 gcgGCTCATCGATGCACGTCGGATAAGGCACTAGACGCAACCGGCAAGATACATCGCACCCTGTCAGCAACTGTAACCCCGACGGATAACCTTCTGCGtt                   <  1:2177514/100‑1 (MQ=255)
                                                                                     atcatcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTg               <  1:3400353/100‑1 (MQ=255)
                                                                                     atcatcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTg               <  1:1803160/100‑1 (MQ=255)
                                                                                      tcatcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGt              <  1:968440/100‑1 (MQ=255)
                                                                                      tcatcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGATAACCTTCTGCGttacagt              <  2:404186/100‑6 (MQ=38)
                                                                                       catcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGtt             <  1:496113/100‑1 (MQ=255)
                                                                                        atcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGttt            <  2:332631/100‑1 (MQ=255)
                                                                                         tcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccat           >  1:2090819‑M2/1‑35 (MQ=255)
                                                                                         tcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGGTAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTa           <  1:2938774/100‑1 (MQ=255)
                                                                                          cGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTaa          <  2:940539/100‑1 (MQ=255)
                                                                                             tGTAGGTCGGTTAAAGACCTCGCCGCATAAGGCAAGATAAATCGCACGTTCTCAGCACACGTAAAGCAGAAGGTTATCCTTCTGCGTTTTTGTTTaa          >  1:2967929/1‑97 (MQ=255)
                                                                                                 ggTCGTATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTg   <  2:1346901/100‑1 (MQ=255)
                                                                                                 ggTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTg   <  2:349910/100‑1 (MQ=255)
                                                                                                 ggTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTg   <  2:2499207/100‑1 (MQ=255)
                                                                                                  gTCGGATAAGGCACTCGCCGCATCCGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccatcagttatta  <  2:2803707‑M2/100‑75 (MQ=255)
                                                                                                  gTCGGATAAGGCACTCGCCGCATCCGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccatcagttatta  <  2:2414337‑M2/100‑75 (MQ=255)
                                                                                                  gTCGGATAAGGCACTCGCCGCATCCGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccatcagttatt   <  1:2394496‑M2/99‑74 (MQ=255)
                                                                                                  gTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGt  >  2:2988254/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
AATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGT  >  NC_000913/1735931‑1736128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.