New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1736030NA (NA)6 (0.050) 4/168 NT NA noncoding (48/74 nt) REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 1736054 NA (NA)noncoding (72/74 nt) REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 145 total aligned reads displayed.

CATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGCAAACTGTTTCAGGTTG  >  NC_000913/1735955‑1736153
                                                                                                   |                                                                                                   
cATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCG                                                                                                     >  2:1220796‑M2/1‑100 (MQ=255)
cATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCG                                                                                                     >  2:1220388‑M2/1‑100 (MQ=255)
cATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCG                                                                                                     >  2:225546‑M2/1‑100 (MQ=255)
  taataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGc                                                                                                   <  2:1321855/100‑1 (MQ=255)
  taataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGc                                                                                                   >  2:3103606/1‑100 (MQ=255)
  taataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGc                                                                                                   <  1:2826218/100‑1 (MQ=255)
     taaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAg                                                                                                >  1:1339549/1‑100 (MQ=255)
      aaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGa                                                                                               <  2:2098804/100‑1 (MQ=255)
         tGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATaa                                                                                            >  2:671865/1‑100 (MQ=255)
          gATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATaaa                                                                                           >  2:3726960/1‑100 (MQ=255)
          gATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATaaa                                                                                           <  2:566829/100‑1 (MQ=255)
              gCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGc                                                                                       <  1:1424162/100‑1 (MQ=255)
               cAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCa                                                                                      <  1:2767354/100‑1 (MQ=255)
                aaaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCAc                                                                                     <  2:3527711/100‑1 (MQ=255)
                 aaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACg                                                                                    <  2:1705557/100‑1 (MQ=255)
                   tGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGtt                                                                                  >  2:2789598/1‑100 (MQ=255)
                    gcagcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGt                                                                                   >  1:2269711/1‑98 (MQ=255)
                    gcagcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTg                                                                                 <  1:1494306/100‑1 (MQ=255)
                       gcaTTGCCTGAAGCGCTACGCTTATCAGGCTTACGATGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCa                                                                              <  2:46853/100‑1 (MQ=255)
                       gcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATTTATGTAGGTCGGAGAATACACTCGCCGCATCCGGCAAGATGAATCGCACGTTGTc                                                                               >  1:3167702/1‑99 (MQ=37)
                       gcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCa                                                                              <  1:1914828/100‑1 (MQ=255)
                       gcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCa                                                                              <  2:3393594/100‑1 (MQ=255)
                        caTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAg                                                                             >  1:1284915/1‑100 (MQ=255)
                         aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                                                                            <  1:2764128/100‑1 (MQ=255)
                         aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                                                                            >  1:1083566/1‑100 (MQ=255)
                         aTTGCCTGAAGAGCTACGGTTATCAGGCCTACGCGGATCATCGATGTCGGTCGGCTAAGGCCCTCGCCGCATCCGGCAACATAAATCGCACGGTCTCAGc                                                                            >  1:3440885/1‑100 (MQ=255)
                          ttGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                                                                            >  2:2424998/1‑99 (MQ=255)
                          ttGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCa                                                                           <  2:2138264/100‑1 (MQ=255)
                            gCCTGAAGCGCTACGCTTATCAGGCCTATGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAAc                                                                         <  2:342573/100‑1 (MQ=255)
                             ccTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACt                                                                        >  2:2248644/1‑100 (MQ=255)
                               tGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGt                                                                      <  1:332668/100‑1 (MQ=255)
                               tGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGt                                                                      <  2:1620880/100‑1 (MQ=255)
                                gAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTa                                                                     >  2:2500582/1‑100 (MQ=255)
                                  aGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAAc                                                                   >  2:1018023/1‑100 (MQ=255)
                                    cgcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGc                                                                 <  1:527879/100‑1 (MQ=255)
                                     gcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCa                                                                >  1:1549478/1‑100 (MQ=255)
                                     gcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCa                                                                >  2:2056578/1‑100 (MQ=255)
                                      cTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAg                                                               >  1:605252/1‑100 (MQ=255)
                                       tACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGa                                                              >  2:1026118/1‑100 (MQ=255)
                                         cGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAg                                                            >  2:498452/1‑100 (MQ=255)
                                         cGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAg                                                            >  2:498566/1‑100 (MQ=255)
                                          gCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCACGATAAATCGCACGTTGTCAGCAACTCTAACGCAGaa                                                             >  1:147272/1‑98 (MQ=255)
                                           cTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGt                                                          <  1:1245412/100‑1 (MQ=255)
                                           cTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGt                                                          <  1:1120253/100‑1 (MQ=255)
                                              aTCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTAt                                                       <  1:1765659/100‑1 (MQ=255)
                                              aTCAGGCCTACGCAGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTAt                                                       <  1:3426943/100‑1 (MQ=255)
                                                 aGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCt                                                    >  2:3623412/1‑100 (MQ=255)
                                                  ggCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCtt                                                   >  1:2662623/1‑100 (MQ=255)
                                                  ggCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCtt                                                   >  2:2081892/1‑100 (MQ=255)
                                                   gCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTc                                                  <  2:3405190/100‑1 (MQ=255)
                                                    ccTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGATaacagatc                                                 >  2:1164830/1‑93 (MQ=255)
                                                    ccTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCACATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCt                                                 <  2:1955633/100‑1 (MQ=255)
                                                       aCGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGATAACCTTCTGCg                                              <  1:439045/100‑1 (MQ=255)
                                                       aCGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGATAACCTTCTGCg                                              <  1:3274652/100‑1 (MQ=255)
                                                        cgcgGATCATCGCTGTAGATCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGATAACCTTCTGCGt                                             <  1:3605328/100‑1 (MQ=255)
                                                        cgcgGATCATCGATGTAGGTCGGATAAGTCACTCCCCGCATCCGGCAAGATAAATCGCACGGTGTCAGCAACTGTAACGCAGAAGGCTAACCTTCTGCGt                                             <  1:2306367/100‑1 (MQ=255)
                                                        cgcgGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGt                                             >  2:3581690/1‑100 (MQ=255)
                                                         gcgGCTCATCGATGCACGTCGGATAAGGCACTAGACGCAACCGGCAAGATACATCGCACCCTGTCAGCAACTGTAACCCCGACGGATAACCTTCTGCGtt                                            <  1:2177514/100‑1 (MQ=255)
                                                             atcatcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTg                                        <  1:1803160/100‑1 (MQ=255)
                                                              tcatcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGt                                       <  1:968440/100‑1 (MQ=255)
                                                              tcatcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGATAACCTTCTGCGttacagt                                       <  2:404186/100‑6 (MQ=38)
                                                               catcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGtt                                      <  1:496113/100‑1 (MQ=255)
                                                                 tcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccat                                    >  1:2090819‑M2/1‑35 (MQ=255)
                                                                 tcGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGGTAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTa                                    <  1:2938774/100‑1 (MQ=255)
                                                                  cGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTaa                                   <  2:940539/100‑1 (MQ=255)
                                                                       tAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAgn                              <  1:2631962/100‑2 (MQ=255)
                                                                         ggTCGTATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTg                            <  2:1346901/100‑1 (MQ=255)
                                                                         ggTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTGAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTg                            >  2:2950811/1‑100 (MQ=255)
                                                                         ggTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTg                            <  2:349910/100‑1 (MQ=255)
                                                                         ggTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTg                            <  2:2499207/100‑1 (MQ=255)
                                                                          gTCGGATAAGGCACTCGCCGCATCCGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccatcagttatta                           <  2:2803707‑M2/100‑75 (MQ=255)
                                                                          gTCGGATAAGGCACTCGCCGCATCCGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccatcagttatta                           <  2:2414337‑M2/100‑75 (MQ=255)
                                                                          gTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGt                           >  2:2988254/1‑100 (MQ=255)
                                                                            cGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTa                         <  1:2138408/100‑1 (MQ=255)
                                                                            cGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTa                         >  1:3237146/1‑100 (MQ=255)
                                                                            cGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTa                         <  1:1026113/100‑1 (MQ=255)
                                                                            cGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCATTTTTGTTTAATTAGCTGtt                          <  1:1324812/99‑1 (MQ=255)
                                                                             ggATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAg                        <  1:40397/100‑1 (MQ=255)
                                                                             ggATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAg                        >  1:918701/1‑100 (MQ=255)
                                                                              gATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGc                       >  1:2263969/1‑100 (MQ=255)
                                                                              gATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGc                       >  2:3657359/1‑100 (MQ=255)
                                                                              gATAAGACACTCGCCGCATCAGGCAAGATGAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGc                       <  1:3111734/100‑1 (MQ=255)
                                                                                  gcgttaacagcgcATTCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACg                   >  2:3113928/11‑100 (MQ=255)
                                                                                  aGGCACTCGCCGCATCCGGCAAGATAAATCGCCCGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACg                   >  2:3281659/1‑100 (MQ=255)
                                                                                  aGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACg                   <  1:498564/100‑1 (MQ=255)
                                                                                  aGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACg                   <  1:2888845/100‑1 (MQ=255)
                                                                                  aGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTGATCCTTCTGCGTTTTTTTGTAATTAGCTGTTAGCAACg                   >  2:1479754/1‑100 (MQ=255)
                                                                                   ggCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGc                  >  1:1632210/1‑100 (MQ=255)
                                                                                   ggCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGc                  >  2:1034657/1‑100 (MQ=255)
                                                                                   ggCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGc                  >  2:116152/1‑100 (MQ=255)
                                                                                    gCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGCa                 <  1:3005168/100‑1 (MQ=255)
                                                                                    gCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGCa                 >  2:889249/1‑100 (MQ=255)
                                                                                     cACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGCaa                <  1:1346756/100‑1 (MQ=255)
                                                                                       cTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGCAAAc              <  1:606747/100‑1 (MQ=255)
                                                                                        tCGCCGCATCCGGCAAGATGAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGCAAACt             >  1:3516550/1‑100 (MQ=255)
                                                                                                 ccGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccatcagttattatgcagcgagatttttcgctacga    <  1:1326156‑M2/100‑98 (MQ=255)
                                                                                                  cGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccatcagttattatgcagcgagatttttcgctacgaa   <  1:2371352‑M2/100‑99 (MQ=255)
                                                                                                  cGacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccatcagttattatgcagcgagatttttcgctacgaa   <  1:2371549‑M2/100‑99 (MQ=255)
                                                                                                  cGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGCAAACTGTTTCAGgtt   >  2:2270250/1‑100 (MQ=255)
                                                                                                   gacctacatcgatgatccgcgtaggcctgataagcgtagcgcttcaggcaatgctgcatttgccatcagttattatgcagcgagatttttcgctacgaat  >  2:1519308‑M2/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
CATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCTGCGTTTTTGTTTAATTAGCTGTTAGCAACGCAAACTGTTTCAGGTTG  >  NC_000913/1735955‑1736153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.