BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	409056 =	NA (NA)	4 (0.030)	3/164	NT	NA	noncoding (5/37 nt)	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	409089 =	NA (NA)	4 (0.030)	3/164	NT	NA	intergenic (+139/+19)	ykiA/rdgC	pseudogene/nucleoid‑associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function

Only 100 of 185 total aligned reads displayed.

TATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGAAATC  >  NC_000913/408991‑409188

aattcaaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAt                                                                                                    >  1:240407‑M1/66‑100 (MQ=255)

 atTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCa                                                                                                     <  1:2916472/98‑1 (MQ=255)

 atTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAtt                                                                                                   <  1:194146/100‑1 (MQ=255)

  ttcaaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTa                                                                                                  >  1:1359319‑M1/64‑100 (MQ=255)

   tgctgcGCTAAAGATTATTGCTCGCCGGAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAtt                                                                                                   <  1:1656047/98‑1 (MQ=255)

    gctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTaaa                                                                                                <  1:1485879/100‑1 (MQ=255)

    gctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTaaa                                                                                                >  1:998805/1‑100 (MQ=255)

     ctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                                                               >  1:911619/1‑100 (MQ=255)

     ctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                                                               <  2:3562129/100‑1 (MQ=255)

     ctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                                                               <  1:1374695/100‑1 (MQ=255)

         gcTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaaa                                                                                           >  2:1993904/1‑100 (MQ=255)

          cTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaaaa                                                                                          >  2:1047219/1‑100 (MQ=255)

              aaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAg                                                                                      <  1:3591242/100‑1 (MQ=255)

                   attGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAAtt                                                                                 <  2:1292521/100‑1 (MQ=255)

                       cgcGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACg                                                                             >  2:2532541/3‑100 (MQ=255)

                          gCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTtg                                                                          >  2:3346904/1‑100 (MQ=255)

                          gCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTtg                                                                          <  2:1382238/100‑1 (MQ=255)

                           ccGTAGCGAATAATTATATGCCTGGTGTGTCTTCGTATGCCGGATAAGACGCGGCAGGCGTCGCATCCGGTATTAAAGGAAAATCAGCAATTAACg                                                                             <  1:2860460/96‑1 (MQ=255)

                                 cGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCg                                                                   <  2:316677/100‑1 (MQ=255)

                                  gAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGc                                                                  <  2:2364811/100‑1 (MQ=255)

                                    ataatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCa                                                                <  1:7092/100‑1 (MQ=255)

                                     taatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTGACGTTGTGCTTCGCCAc                                                               >  2:2073825/1‑100 (MQ=255)

                                     taatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAc                                                               <  1:1084847/100‑1 (MQ=255)

                                      aatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAcc                                                              <  1:933431/100‑1 (MQ=255)

                                      aatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAcc                                                              <  1:3521035/100‑1 (MQ=255)

                                      aatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAcc                                                              <  1:1251734/100‑1 (MQ=255)

                                       atTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCCTTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCt                                                             <  1:310476/100‑1 (MQ=255)

                                       atTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCt                                                             >  2:2046916/1‑100 (MQ=255)

                                         tataTGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTaa                                                           <  2:3314407/100‑1 (MQ=255)

                                          atatGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAAt                                                          >  2:310711/1‑100 (MQ=255)

                                             tGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCt                                                       <  1:2649082/100‑1 (MQ=255)

                                              gCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCtt                                                      >  1:3352487/1‑100 (MQ=255)

                                              gCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCtt                                                      >  2:2687993/1‑100 (MQ=255)

                                               ccTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTc                                                     >  1:1606532/1‑100 (MQ=255)

                                                cTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTc                                                     <  1:2945053/99‑1 (MQ=255)

                                                cTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCa                                                    <  2:1254670/100‑1 (MQ=255)

                                                  ggTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAAt                                                  >  2:1429841/1‑100 (MQ=255)

                                                  ggTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAAt                                                  <  2:1354481/100‑1 (MQ=255)

                                                    tgtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCa                                                <  1:1006684/100‑1 (MQ=255)

                                                     gtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAg                                               <  1:282464/100‑1 (MQ=255)

                                                      tgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAgg                                              <  1:215822/100‑1 (MQ=255)

                                                        gCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGtt                                            >  2:1748164/1‑100 (MQ=255)

                                                         cTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGttt                                           >  2:3444833/1‑100 (MQ=255)

                                                          ttCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGGAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAggcctt                                          >  1:2563261/1‑96 (MQ=255)

                                                          ttCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGtttt                                          <  1:814262/100‑1 (MQ=255)

                                                           tCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTg                                         <  2:2419088/100‑1 (MQ=255)

                                                           tCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTg                                         <  1:956318/100‑1 (MQ=255)

                                                            cGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGa                                        <  1:222949/100‑1 (MQ=255)

                                                            cGTACGCCGGATAAGACGCGGCAGGCGTCACATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGa                                        <  2:535294/100‑1 (MQ=255)

                                                             gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                       >  2:2215578/1‑100 (MQ=255)

                                                             gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                       <  1:1017466/100‑1 (MQ=255)

                                                              tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt                                      <  1:233204/100‑1 (MQ=255)

                                                              tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt                                      <  2:3323768/100‑1 (MQ=255)

                                                               atgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAtt                                     >  1:240407‑M2/36‑100 (MQ=255)

                                                               atgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAtt                                     >  2:1181200‑M2/36‑100 (MQ=255)

                                                               aCGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTGAAGGAAAATAAGCAATTAACGTTGTGCTTAGCCACCTAATCATTCAATCAGGTTTTGAAtt                                     >  1:2366475/1‑100 (MQ=38)

                                                                  CCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAAc                                  >  2:2812034‑M1/1‑100 (MQ=255)

                                                                  CCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAAc                                  >  1:1662090‑M1/1‑100 (MQ=255)

                                                                   CGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACg                                 >  1:462895‑M1/1‑100 (MQ=255)

                                                                   CGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACg                                 <  2:1917103‑M1/100‑1 (MQ=255)

                                                                   CGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACg                                 <  2:448208‑M1/100‑1 (MQ=255)

                                                                   CGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACg                                 >  2:3369764‑M1/1‑100 (MQ=255)

                                                                    GGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGc                                <  2:537032‑M1/100‑1 (MQ=255)

                                                                     gATAATACGCGTCAGACCTCGTATCCGGCATTTAAGGCAAATCAGCAGTTAACCTGATGCTTCACCATCTAATCCTTCAATCAGGGTTTGTCTTAATGCt                               >  1:3037907/1‑100 (MQ=255)

                                                                      ATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTg                              >  2:3697465‑M1/1‑100 (MQ=255)

                                                                        aggACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGcc                            <  1:3577647/98‑1 (MQ=255)

                                                                        aaGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGCATTAACGCTGcc                            <  2:2452541/100‑1 (MQ=255)

                                                                        aaGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGcc                            <  1:415764/100‑1 (MQ=255)

                                                                        aaGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGcc                            <  1:1831184/100‑1 (MQ=255)

                                                                        aaGACGCGGCAGGCGTCGCATCCGGCATTAAACGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTACAATCAGGTTTTGAATTAACGCTGcc                            <  1:1197100/100‑1 (MQ=255)

                                                                         aGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCa                           <  1:3318730/100‑1 (MQ=255)

                                                                          gACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAg                          >  2:948550/1‑100 (MQ=255)

                                                                          gACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAg                          >  1:2425144/1‑100 (MQ=255)

                                                                          gACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAg                          >  1:2062240/1‑100 (MQ=255)

                                                                           aCGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGt                         <  1:3206683/100‑1 (MQ=255)

                                                                           aCGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGt                         <  2:1892188/100‑1 (MQ=255)

                                                                            cgcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGtt                        >  2:596345/1‑100 (MQ=255)

                                                                            cgcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGtt                        >  2:2872921/1‑100 (MQ=255)

                                                                            cgcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGtt                        >  2:1611177/1‑100 (MQ=255)

                                                                               cttccgatctgCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAc                     <  2:2606257/90‑1 (MQ=255)

                                                                                gCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                    <  2:822829/100‑1 (MQ=255)

                                                                                gCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                    <  2:2758819/100‑1 (MQ=255)

                                                                                gCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                    <  1:1142214/100‑1 (MQ=255)

                                                                                gCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                    <  2:1567220/100‑1 (MQ=255)

                                                                                 cAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCCCCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcc                    <  1:2146748/99‑1 (MQ=255)

                                                                                 cAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCa                   >  2:1645897/1‑100 (MQ=255)

                                                                                  aGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAg                  <  1:1564004/100‑1 (MQ=255)

                                                                                  aGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAg                  <  2:2727693/100‑1 (MQ=255)

                                                                                  aGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCATCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAg                  <  1:1993894/100‑1 (MQ=255)

                                                                                     cGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtca               <  2:3591428/100‑1 (MQ=255)

                                                                                      gTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcat              >  1:1574422/1‑100 (MQ=255)

                                                                                       tCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcatc             <  2:2918986/100‑1 (MQ=255)

                                                                                         gCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCAcagatcggaag           >  1:2606242/1‑90 (MQ=255)

                                                                                         gCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAg           >  2:882926/1‑100 (MQ=255)

                                                                                           atccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGa         >  1:173705‑M2/8‑100 (MQ=255)

                                                                                           atccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGa         >  1:381589‑M2/8‑100 (MQ=255)

                                                                                             ccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCTGTTCACCAGTCATCAGGATg       <  1:2287155‑M2/95‑1 (MQ=255)

                                                                                              cggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATAAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGa      >  2:714862‑M2/5‑100 (MQ=255)

                                                                                              cggcACTAAAGGCAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCACTTCACCAGTCATcaggct        >  1:279199‑M2/5‑96 (MQ=255)

                                                                                                  aTTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGAAATc  >  1:1353012/1‑100 (MQ=255)

TATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGAAATC  >  NC_000913/408991‑409188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.