New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2539608 =NA (NA)9 (0.070) 6/166 NT NA noncoding (2/36 nt) REP175 (repetitive extragenic palindromic) element; contains 1 REP sequences REP175 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2539638 = NA (NA)noncoding (32/36 nt) REP175 (repetitive extragenic palindromic) element; contains 1 REP sequences REP175 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 177 total aligned reads displayed.

CTTCACCAGAGGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAG  >  NC_000913/2539539‑2539736
                                                                                                   |                                                                                                  
gaatgttaaacgcccggaggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctatagaCCTGATGCGACGCTTGCGCGTCTTATCAGGt                                                                                                    >  1:2455725‑M1/70‑100 (MQ=255)
cTTCACCAGAGGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGt                                                                                                    >  2:969842/1‑100 (MQ=255)
 aatgttaaacgcccggaggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagaCCTGATGCGACGCTTGCGCGTCTTATCAGGTc                                                                                                   >  2:3313001‑M1/69‑100 (MQ=255)
 aatgttaaacgcccggaggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagaCCTGATGCGACGCTTGCGCGTCTTATCAGGTc                                                                                                   >  2:1180988‑M1/69‑100 (MQ=255)
 aatgttaaacgcccggaggcgcttcccgcgatacgggctctttaatggcaaggtttgtaacctgtagaCCTGATGCGACGCTTGCGCGTCTTATCAGGTc                                                                                                   >  1:2627562‑M1/69‑100 (MQ=255)
  tCACCAGAGGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCt                                                                                                  <  1:1576986/100‑1 (MQ=255)
   cACCAGAGGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTa                                                                                                 >  1:2851977/1‑100 (MQ=255)
   cACCAGAGGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTa                                                                                                 >  1:3266474/1‑100 (MQ=255)
    aCCAGAGGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTAc                                                                                                >  1:3181537/1‑100 (MQ=255)
     ccAGAGGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACa                                                                                               >  2:2069414/1‑100 (MQ=255)
     ccAGAGGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACa                                                                                               >  2:2236386/1‑100 (MQ=255)
        gagGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCATGATGCGACGCTTGCGCGTCTTATCAGGTCTACAgg                                                                                             >  1:2648861/1‑99 (MQ=255)
        aacgcccggaggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagaCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGt                                                                                            >  2:457647‑M1/62‑100 (MQ=255)
          ggCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTa                                                                                          >  1:1271981/1‑100 (MQ=255)
          ggCGTATTGCCTATTGTTTGTTCTAATGTAATCTCGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGGCTACAGGtt                                                                                           >  1:2458470/1‑99 (MQ=255)
           gCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTAc                                                                                         <  2:2700799/100‑1 (MQ=255)
           gCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTAc                                                                                         <  2:124618/100‑1 (MQ=255)
           gCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTAc                                                                                         <  2:2215323/100‑1 (MQ=255)
            cGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACa                                                                                        <  2:1272957/100‑1 (MQ=255)
                 tGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCt                                                                                   >  1:1859210/1‑100 (MQ=255)
                   ccTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTg                                                                                 >  1:3516318/1‑100 (MQ=255)
                    cTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGc                                                                                <  1:1706219/100‑1 (MQ=255)
                    cTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGc                                                                                >  1:272048/1‑100 (MQ=255)
                     tATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGcc                                                                               <  2:110626/100‑1 (MQ=255)
                      aTTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCa                                                                              <  1:2016715/100‑1 (MQ=255)
                         gtttgttCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTa                                                                           >  1:2282273/1‑100 (MQ=255)
                         gtttgttCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTa                                                                           >  1:372870/1‑100 (MQ=255)
                         gtttgttCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTa                                                                           >  2:3499421/1‑100 (MQ=255)
                         gtttgttCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTa                                                                           >  1:2940310/1‑100 (MQ=255)
                            tgttCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTaaaa                                                                        <  1:1913789/100‑1 (MQ=255)
                             gttCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTaaaaa                                                                       >  1:720970/1‑100 (MQ=255)
                              ttCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAg                                                                      >  2:586427/1‑100 (MQ=255)
                              tccgatcttACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAg                                                                      <  2:1897074/92‑1 (MQ=255)
                               tCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGc                                                                     <  1:1367969/100‑1 (MQ=255)
                                 tAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGccc                                                                   >  2:1807166/1‑100 (MQ=255)
                                  aaTGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCg                                                                  >  2:2837784/1‑100 (MQ=255)
                                  aaTGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCg                                                                  <  1:1528250/100‑1 (MQ=255)
                                   aTGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCgg                                                                 <  1:1094892/100‑1 (MQ=255)
                                    tGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGa                                                                <  2:1465255/100‑1 (MQ=255)
                                    tGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGa                                                                >  1:3436928/1‑100 (MQ=255)
                                    tGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGa                                                                >  1:996057/1‑100 (MQ=255)
                                      tACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAgagatcgga                                                              >  1:1897064/1‑92 (MQ=255)
                                      tACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATc                                                              >  2:1633251/1‑100 (MQ=255)
                                      tACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATc                                                              <  2:3454430/100‑1 (MQ=255)
                                       aCTCCCGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAACGCCCGGaggc                                                             <  1:122724/100‑4 (MQ=255)
                                       aCTCACGCACTCTAGACAGACTAGGTTTTTCCTGAGGCGACGCTGGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGccc                                                                   >  1:2176089/1‑94 (MQ=21)
                                       aCTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcg                                                             <  2:1859220/100‑1 (MQ=255)
                                       aCTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcg                                                             >  2:251499/1‑100 (MQ=255)
                                        cTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcgc                                                            >  2:1905778/1‑100 (MQ=255)
                                         tCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcgcg                                                           >  2:2108879/1‑100 (MQ=255)
                                          cACGATCTCTCTCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACGAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                          <  1:2463520/100‑1 (MQ=255)
                                          cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                          <  2:1303393/100‑1 (MQ=255)
                                          cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                          <  1:2218034/100‑1 (MQ=255)
                                                 tctATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAgcgc                                                   >  1:1161424/1‑100 (MQ=255)
                                                  ctATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGcc                                                  >  1:1441577/1‑100 (MQ=255)
                                                  ctATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGcc                                                  >  2:1739673/1‑100 (MQ=255)
                                                  ctATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGcc                                                  >  2:1720443/1‑100 (MQ=255)
                                                   tATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCt                                                 >  1:2064080/1‑100 (MQ=255)
                                                          aCGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCg                                          >  2:391780/1‑100 (MQ=255)
                                                           cGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCTGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGt                                         >  1:1996354/1‑100 (MQ=255)
                                                           cGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCg                                          >  1:1859476/1‑99 (MQ=255)
                                                           cGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGt                                         >  2:3335100/1‑100 (MQ=255)
                                                           cGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                        <  1:3477740/100‑1 (MQ=255)
                                                            acctgtagacctgataagacgcgcaagcgtcgcatcaggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                        >  2:1071172‑M2/40‑100 (MQ=255)
                                                            acctgtagacctgataagacgcgcaagcgtcgcatcaggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                        >  2:457647‑M2/40‑100 (MQ=255)
                                                             tggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGttt                                       >  1:3435147/1‑100 (MQ=255)
                                                             cctgtagacctgataagacgcgcaagcgtcgcatcaggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGttt                                       >  1:2191507‑M2/39‑100 (MQ=255)
                                                               gtgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGTGAAGCGCCTCCGGGCGTTTaa                                     <  1:764642/100‑1 (MQ=255)
                                                                  ttGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACAt                                  <  2:2934408/100‑1 (MQ=255)
                                                                   tGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACAtt                                 <  1:2377415/100‑1 (MQ=255)
                                                                   tGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACAtn                                 <  1:3540812/100‑2 (MQ=255)
                                                                    gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                <  1:3371742/100‑1 (MQ=255)
                                                                     CCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCa                               <  2:3393018‑M1/100‑1 (MQ=255)
                                                                       TGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                             >  1:3325344‑M1/1‑100 (MQ=255)
                                                                       TGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                             >  1:2292127‑M1/1‑100 (MQ=255)
                                                                        GATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTcacag                            <  2:3619385‑M1/100‑3 (MQ=255)
                                                                           gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAc                         <  1:1377763/100‑1 (MQ=255)
                                                                           gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAc                         <  1:659909/100‑1 (MQ=255)
                                                                           gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAc                         >  1:1449335/1‑100 (MQ=255)
                                                                            cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                        >  2:2449087/1‑100 (MQ=255)
                                                                            cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                        <  2:2851996/100‑1 (MQ=255)
                                                                            cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCCTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAc                         >  1:891996/1‑99 (MQ=255)
                                                                             gACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                        >  1:2792380/1‑99 (MQ=255)
                                                                               cGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTAt                     >  2:2725882/1‑100 (MQ=255)
                                                                                gCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATc                    <  2:3266497/100‑1 (MQ=255)
                                                                                 cTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCa                   <  2:716013/100‑1 (MQ=255)
                                                                                        gTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCtt            >  1:1633098/1‑100 (MQ=255)
                                                                                        gTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCtt            >  1:3552366/1‑100 (MQ=255)
                                                                                         tCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCGACCTATCAGGCGCttt           >  1:2185917/1‑100 (MQ=255)
                                                                                         tCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCttt           <  2:3503036/100‑1 (MQ=255)
                                                                                           ttATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgt         >  1:3095927/1‑100 (MQ=255)
                                                                                             atcaggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGc       >  2:2654590‑M2/7‑100 (MQ=255)
                                                                                             atcaggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGc       >  2:2350212‑M2/7‑100 (MQ=255)
                                                                                             atcaggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGc       <  1:1807158‑M2/94‑1 (MQ=255)
                                                                                              tcaggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTgcn      <  2:2577406‑M2/95‑2 (MQ=255)
                                                                                               caggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCga     >  2:1058993‑M2/5‑100 (MQ=255)
                                                                                                 ggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgaga   >  1:2083976‑M2/3‑100 (MQ=255)
                                                                                                 ggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgaga   <  1:2236375‑M2/98‑1 (MQ=255)
                                                                                                  gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag  <  2:2960219‑M2/99‑1 (MQ=255)
                                                                                                  gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag  >  2:1258200‑M2/2‑100 (MQ=255)
                                                                                                   |                                                                                                  
CTTCACCAGAGGCGTATTGCCTATTGTTTGTTCTAATGTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAG  >  NC_000913/2539539‑2539736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.