New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2597686 =NA (NA)10 (0.080) 8/166 NT NA noncoding (14/46 nt) REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2597714 = NA (NA)noncoding (42/46 nt) REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 178 total aligned reads displayed.

GCATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGGAT  >  NC_000913/2597615‑2597812
                                                                                                   |                                                                                                  
gCATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGaa                                                                                                    >  2:1633022/1‑100 (MQ=255)
gCATCTTTATCACTCCTGGGGGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGAAGCGGCGTGAACGCCTTATCCGaa                                                                                                    >  2:1190069/1‑100 (MQ=255)
 cATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCGGGATGTTTTGTCGGATGCGGCGTGAACGCCTTCTCCGAAc                                                                                                   >  1:3125556/1‑100 (MQ=255)
 cATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAAc                                                                                                   <  1:2802567/100‑1 (MQ=255)
 cATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAAc                                                                                                   >  2:583761/1‑100 (MQ=255)
 cATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAAc                                                                                                   >  2:584241/1‑100 (MQ=255)
 cATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAAc                                                                                                   <  1:1655615/100‑1 (MQ=255)
  aTCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACt                                                                                                  <  1:725135/100‑1 (MQ=255)
   tCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTa                                                                                                 >  2:1871212/1‑100 (MQ=255)
    cTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTAc                                                                                                >  2:1522730/1‑100 (MQ=255)
     tttATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACg                                                                                               >  2:194502/1‑100 (MQ=255)
     tttATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACg                                                                                               >  2:3151491/1‑100 (MQ=255)
     gtgtgcgtctgcaggaaaacgcgattttagcggtaattcgcacgaaatttgtttgtcggacgtagtTCGGATGCGGCGTGAACGCCTTATCCGAACTACg                                                                                               >  1:1208541‑M1/67‑100 (MQ=255)
      ttATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGt                                                                                              <  1:1281966/100‑1 (MQ=255)
       tATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGAGGCGGCGTGAACGCCTTATCCGAACTACGTc                                                                                             >  1:2577358/1‑100 (MQ=255)
         tCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCg                                                                                           >  1:3286447/1‑100 (MQ=255)
          cACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGa                                                                                          >  2:2947352/1‑100 (MQ=255)
             tCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaa                                                                                       >  2:1369846/1‑100 (MQ=255)
              ccTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaa                                                                                      >  2:2344777/1‑100 (MQ=255)
              ccTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaa                                                                                      >  2:1827156/1‑100 (MQ=255)
              ccTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaa                                                                                       >  2:755392/1‑99 (MQ=255)
               cTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaac                                                                                     <  1:61513/100‑1 (MQ=255)
               cTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaac                                                                                     <  1:2294664/100‑1 (MQ=255)
                  ggTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGAcaaacaaa                                                                                  >  2:1029097/1‑100 (MQ=255)
                    tgtgAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCGTTATCCGAACTACGTGCGACAAACAAAt                                                                                 >  1:1554934/1‑99 (MQ=255)
                     gtgAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAAttt                                                                               >  2:3258724/1‑100 (MQ=255)
                     gtgAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAAttt                                                                               >  2:1263203/1‑100 (MQ=255)
                     gtgAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAAttt                                                                               >  2:3464719/1‑100 (MQ=255)
                      acgcgattttagcggtaattcgcacgaaatttgtttgtcggatgttttgTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTc                                                                              >  2:1309672‑M1/50‑100 (MQ=255)
                       gAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCg                                                                             >  2:2735013/1‑100 (MQ=255)
                       cgcgattttagcggtaattcgcacgaaatttgtttgccggatgttttgTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCg                                                                             >  2:1940217‑M1/49‑100 (MQ=255)
                          ttAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGc                                                                          >  2:213223/1‑100 (MQ=255)
                           tAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCg                                                                         >  2:3706360/1‑100 (MQ=255)
                            aaCGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGa                                                                        >  1:2442105/1‑100 (MQ=255)
                            aaCGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGa                                                                        >  1:950019/1‑100 (MQ=255)
                            aaCGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGa                                                                        >  1:2896598/1‑100 (MQ=255)
                            aaCGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGa                                                                        >  2:2670458/1‑100 (MQ=255)
                              cGTTTTAAAATCTCTTGCTGTATGGTGTGCCGGATGTTTTGTCGGATGTGGCGTGAACGCCTTATCCGAACTACGTCCGACAACCACATTGCGtttcact                                                                      >  1:2314145/1‑94 (MQ=25)
                               gTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAAtt                                                                     >  2:3359979/1‑100 (MQ=255)
                               gTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAAtt                                                                     >  2:977106/1‑100 (MQ=255)
                                 tttAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAc                                                                   >  1:1949476/1‑100 (MQ=255)
                                 tttAAAAGCTTTTGCTGTCTGGTGTGCCGGATGTTTTGGCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAc                                                                   <  2:2957335/100‑1 (MQ=255)
                                  ttAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAcc                                                                  >  2:2361321/1‑100 (MQ=255)
                                  ttAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAcc                                                                  >  2:2012598/1‑100 (MQ=255)
                                  ttAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAcc                                                                  >  2:3410097/1‑100 (MQ=255)
                                  ttAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAcc                                                                  >  1:2477152/1‑100 (MQ=255)
                                     aaaTCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCt                                                               >  1:572083/1‑100 (MQ=255)
                                     aaaTCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCt                                                               >  2:2507168/1‑100 (MQ=255)
                                     aaaTCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCt                                                               <  1:2198641/100‑1 (MQ=255)
                                     aaaTCTTTTGCTGTCTGGTGTACCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCt                                                               <  1:2256460/100‑1 (MQ=255)
                                         cTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTaaaa                                                           >  2:2142317/1‑100 (MQ=255)
                                          ttttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAAt                                                          >  1:3643291/1‑100 (MQ=255)
                                          ttttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAAt                                                          >  2:2615046/1‑100 (MQ=255)
                                            ttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcg                                                        <  1:3658440/100‑1 (MQ=255)
                                            ttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcg                                                        <  1:194500/100‑1 (MQ=255)
                                            ttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcg                                                        >  2:2774572/1‑100 (MQ=255)
                                             tGCTGTATGGTGTGCCGGATGGTTTGTCGGATGAGGCGTGAACGCCTCATCAGAACTACGTCCGACAAACAAATTTCGTGCGAAGTACACCTAAAATc                                                         >  1:761551/1‑98 (MQ=37)
                                              gCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAAGGCCTTATCCGAACTACTGCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcgcg                                                      >  1:3115078/1‑100 (MQ=255)
                                              gCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcgcg                                                      <  2:1411023/100‑1 (MQ=255)
                                              gCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcgcg                                                      <  1:2734994/100‑1 (MQ=255)
                                              gCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcgcg                                                      <  1:3464695/100‑1 (MQ=255)
                                               cTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcgcgn                                                     <  2:1795005/100‑2 (MQ=255)
                                               cTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGt                                                     <  1:213221/100‑1 (MQ=255)
                                               cTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGt                                                     <  1:1913134/100‑1 (MQ=255)
                                                  tCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGtttt                                                  <  2:2014019/100‑1 (MQ=255)
                                                   cTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTc                                                 >  2:1302231/1‑100 (MQ=255)
                                                     ggTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCt                                               <  1:3359955/100‑1 (MQ=255)
                                                     ggTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCt                                               >  1:1307919/1‑100 (MQ=255)
                                                       tgtgCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGc                                             <  1:2794342/100‑1 (MQ=255)
                                                       tgtgCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGc                                             <  1:121359/100‑1 (MQ=255)
                                                        gtgCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCa                                            <  2:2910749/100‑1 (MQ=255)
                                                        gtgCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCa                                            <  1:143162/100‑1 (MQ=255)
                                                         tgCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAg                                           <  2:3190335/100‑1 (MQ=255)
                                                          gCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACGAACAAAATTCGTGCGAATTACCGCTACAATCGCGTTTTCCTGCAg                                           >  1:1179671/1‑99 (MQ=255)
                                                            cGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACg                                        <  1:805380/100‑1 (MQ=255)
                                                             ggATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGc                                       >  2:3075920/1‑100 (MQ=255)
                                                             ggATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGc                                       <  2:1085780/100‑1 (MQ=255)
                                                               aTGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGcac                                     <  2:3349224/100‑1 (MQ=255)
                                                                 gTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCacac                                   >  2:1146847/1‑100 (MQ=255)
                                                                  gtagttcggataaggcgttcacgccgcatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACg                                  >  2:1157075‑M2/34‑100 (MQ=255)
                                                                   tttGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGt                                 >  2:3690685/1‑100 (MQ=255)
                                                                   tttGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGt                                 >  1:936723/1‑100 (MQ=255)
                                                                    ttGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGtt                                <  2:1705583/100‑1 (MQ=255)
                                                                      ttcggataaggcgttcacgccgcatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTg                              >  2:1543956‑M2/30‑100 (MQ=255)
                                                                      gTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTg                              >  2:1166760/1‑100 (MQ=255)
                                                                      gTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTg                              >  2:2846884/1‑100 (MQ=255)
                                                                       tcggataaggcgttcacgccgcatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGc                             >  1:1667234‑M2/29‑100 (MQ=255)
                                                                        CGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCg                            >  1:541570‑M1/1‑100 (MQ=255)
                                                                         GGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGt                           <  2:3536755‑M1/100‑1 (MQ=255)
                                                                          GATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCg                            >  1:1530494‑M1/1‑98 (MQ=255)
                                                                            taaggcgttcacgccgcatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatc                        >  2:1821576‑M2/24‑100 (MQ=255)
                                                                            tGCGGCGTGAATGCCTTATCCGAACTCCGTCCGGCAGGGAAATTGCGTGCGAATGACCGCTACACGCGCGTTATCGTGCCGACGAACACGATTGCGtgt                         >  1:1842643/1‑97 (MQ=255)
                                                                             gcggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatca                       <  1:1042073/100‑1 (MQ=255)
                                                                               ggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcata                     >  1:1895938/1‑100 (MQ=255)
                                                                                      aCGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaa              <  1:2077507/100‑1 (MQ=255)
                                                                                      aCGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaa              <  1:2126977/100‑1 (MQ=255)
                                                                                          cTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAg          <  1:584239/100‑1 (MQ=255)
                                                                                               ccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCg     >  2:463666‑M2/5‑100 (MQ=255)
                                                                                               ccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCg     >  2:893038‑M2/5‑100 (MQ=255)
                                                                                               ccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAGGGCCgg    >  1:1729208‑M2/5‑100 (MQ=255)
                                                                                                   |                                                                                                  
GCATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGGAT  >  NC_000913/2597615‑2597812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.