BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4289212	132 (0.940)	7 (0.050)	7/184	16.8	5.3%	intergenic (+12/‑33)	nrfA/nrfB	nitrite reductase, formate‑dependent, cytochrome/nitrite reductase, formate‑dependent, penta‑heme cytochrome c
*	?	NC_000913	= 4289220	129 (0.990)	7 (0.050)	7/184	16.8	5.3%	intergenic (+20/‑25)	nrfA/nrfB	nitrite reductase, formate‑dependent, cytochrome/nitrite reductase, formate‑dependent, penta‑heme cytochrome c
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 134 total aligned reads displayed.

AATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACG  >  NC_000913/4289113‑4289311

    aaGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGc                                                                                                 <  1:120531/100‑1 (MQ=255)

      ggCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCaa                                                                                               >  1:405007/1‑100 (MQ=255)

        ccGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGccccttgcga                                                                                             >  2:1961631/1‑92 (MQ=255)

           agaAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGc                                                                                          <  2:2796364/100‑1 (MQ=255)

             aaGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCgg                                                                                        <  1:1665996/100‑1 (MQ=255)

                 aGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGaaaa                                                                                    >  2:1339504/1‑100 (MQ=255)

                  ggACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAac                                                                                   <  1:3465191/100‑1 (MQ=255)

                   gACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAaca                                                                                  <  1:3374796/100‑1 (MQ=255)

                    aCTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCGGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAacac                                                                                 <  1:3358569/100‑1 (MQ=255)

                     cTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAAcaca                                                                                <  2:1739089/100‑1 (MQ=255)

                       tcatcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAAt                                                                              >  2:1110662/1‑100 (MQ=255)

                       tcatcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAAt                                                                              >  2:173973/1‑100 (MQ=255)

                        catcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATg                                                                             >  1:1086639/1‑100 (MQ=255)

                        catcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATg                                                                             >  1:1793189/1‑100 (MQ=255)

                         atcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATgg                                                                            >  1:134868/1‑100 (MQ=255)

                         atcaAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATgg                                                                            <  1:1683586/100‑1 (MQ=255)

                            aaaaCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGt                                                                         >  1:2426211/1‑100 (MQ=255)

                             aaaCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTg                                                                        <  1:3049506/100‑1 (MQ=255)

                             aaaCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTg                                                                        >  1:835059/1‑100 (MQ=255)

                             aaaCGGTGATCCCGCAGTGGGAAGAACAGGCACGAAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCACCTCGCCAGGGGCGGAAAACACAATGGAg                                                                          >  1:1481578/1‑98 (MQ=255)

                              agcGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGa                                                                       <  1:2140204/98‑1 (MQ=255)

                              aaCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGa                                                                       <  2:576880/100‑1 (MQ=255)

                              aaCGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGa                                                                       <  2:2006188/100‑1 (MQ=255)

                                cGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAat                                                                     <  1:450749/100‑1 (MQ=255)

                                   tGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATg                                                                  <  2:1245180/100‑1 (MQ=255)

                                    gATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGa                                                                 <  1:1539848/100‑1 (MQ=255)

                                       cccGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCg                                                              <  2:2413531/100‑1 (MQ=255)

                                        ccGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGt                                                             >  1:3263387/1‑100 (MQ=255)

                                           cAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTAtt                                                          <  2:3411963/100‑1 (MQ=255)

                                            aGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTa                                                         <  2:1698646/100‑1 (MQ=255)

                                               gggAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgt                                                      <  1:1650680/100‑1 (MQ=255)

                                               gggAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgt                                                      >  1:2353436/1‑100 (MQ=255)

                                               gggAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgt                                                      >  1:2755351/1‑100 (MQ=255)

                                               gggAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgt                                                      >  1:1181143/1‑100 (MQ=255)

                                                  aagaaCAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttcg                                                   >  2:1606632/1‑100 (MQ=255)

                                                  aagaaCAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTAcgttcg                                                   <  2:963568/100‑1 (MQ=255)

                                                     aaCAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGtta                                                >  2:118791/1‑100 (MQ=255)

                                                       cAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTTAATATGAGCGTATTACGTTCGttatt                                              <  2:2149327/100‑1 (MQ=255)

                                                       cAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGttatt                                              >  1:571833/1‑100 (MQ=255)

                                                       cAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGttatt                                              >  1:152833/1‑100 (MQ=255)

                                                        aGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGttatta                                             <  2:2076937/100‑1 (MQ=255)

                                                         ggCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTaa                                            <  2:2229084/100‑1 (MQ=255)

                                                         ggCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTaa                                            >  1:2686358/1‑100 (MQ=255)

                                                         ggCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTaa                                            >  1:2382444/1‑100 (MQ=255)

                                                         ggCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTaa                                            <  1:1872186/100‑1 (MQ=255)

                                                          gCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAATACACAATGGAGTGAATATGAGCGTATTACGTTCGttattatc                                           <  2:2382461/100‑3 (MQ=255)

                                                          gCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAAc                                           <  2:2995378/100‑1 (MQ=255)

                                                          gCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAAc                                           >  2:1495906/1‑100 (MQ=255)

                                                           cACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACt                                          >  1:1095481/1‑100 (MQ=255)

                                                           cACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACt                                          <  1:2573115/100‑1 (MQ=255)

                                                            aCGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCATCGCAAGGGGCGGAAAATACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTg                                         >  1:2466965/1‑100 (MQ=255)

                                                               tAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCg                                      >  1:3358945/1‑100 (MQ=255)

                                                                agcaaCGGTCTGTGAAGCCAATAACCCCGTTGCGCCTCGCAAGGGGCGGAAAACACAATGGAGGGAATATGAGCGTATTACGTTCGTTATTAACTGCCgg                                     >  2:2368266/4‑100 (MQ=255)

                                                                aaaaaCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCgg                                     <  2:2110670/100‑1 (MQ=255)

                                                                 aaaaCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCggg                                    >  1:1630277/1‑100 (MQ=255)

                                                                 aaaaCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCggg                                    <  1:3003320/100‑1 (MQ=255)

                                                                  aaaCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTATCTGCCgggg                                   >  2:1643794/1‑100 (MQ=255)

                                                                  aaaCGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCgggg                                   >  2:1642487/1‑100 (MQ=255)

                                                                       gTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATCTGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTg                              <  1:2166318/100‑1 (MQ=255)

                                                                       gTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTg                              <  1:1606623/100‑1 (MQ=255)

                                                                        tCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTgg                             <  1:1927661/100‑1 (MQ=255)

                                                                        tCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTgg                             <  2:3354205/100‑1 (MQ=255)

                                                                         cTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGc                            >  2:2392121/1‑100 (MQ=255)

                                                                           gTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGt                          >  2:2967005/1‑100 (MQ=255)

                                                                           gTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGt                          >  2:2995525/1‑100 (MQ=255)

                                                                             tAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCg                        >  2:2019467/1‑100 (MQ=255)

                                                                              aaGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCgg                       >  2:727551/1‑100 (MQ=255)

                                                                               aGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCggg                      >  1:2527189/1‑100 (MQ=255)

                                                                               aGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCggg                      <  2:1181147/100‑1 (MQ=255)

                                                                               aGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCggg                      >  1:728964/1‑100 (MQ=255)

                                                                               aGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCggg                      >  2:1110641/1‑100 (MQ=255)

                                                                               aGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCggg                      >  2:2171886/1‑100 (MQ=255)

                                                                                gCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGc                     <  2:2426227/100‑1 (MQ=255)

                                                                                gCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGc                     >  2:2946940/1‑100 (MQ=255)

                                                                                 ccAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGcc                    <  2:2254312/100‑1 (MQ=255)

                                                                                 ccAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGcc                    <  2:1002860/100‑1 (MQ=255)

                                                                                  cAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCt                   >  1:3489352/1‑100 (MQ=255)

                                                                                      aaCCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtgttg               <  2:2527206/100‑1 (MQ=255)

                                                                                       aCCCCGTTCCGCCTCGCAAGGGGCGGAAAACACACTGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtgttg               >  1:2184066/1‑99 (MQ=255)

                                                                                       aCCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtgttgt              >  1:1841922/1‑100 (MQ=255)

                                                                                       aCCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtgttgt              >  1:1352376/1‑100 (MQ=255)

                                                                                        ccccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCtgttgt              >  2:1168161/1‑99 (MQ=255)

                                                                                        ccccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTtgtg             <  2:1523925/100‑1 (MQ=255)

                                                                                        ccccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTtgtg             >  1:343383/1‑100 (MQ=255)

                                                                                        ccccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTtgtg             >  1:1240197/1‑100 (MQ=255)

                                                                                         cccGTTCCGCCTCGCAAGGGGCGGAAAACACACTGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTgg            <  2:2112567/100‑1 (MQ=255)

                                                                                         cccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTgg            >  2:3071461/1‑100 (MQ=255)

                                                                                         cccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTgg            <  1:1346655/100‑1 (MQ=255)

                                                                                         cccGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTgg            <  2:405008/100‑1 (MQ=255)

                                                                                             ttCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGcc        <  2:1095485/100‑1 (MQ=255)

                                                                                             ttCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGcc        <  1:236482/100‑1 (MQ=255)

                                                                                               ccGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTg      >  2:1576944/1‑100 (MQ=255)

                                                                                                 gCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGaa    >  2:3083284/1‑100 (MQ=255)

                                                                                                 gCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGaa    >  1:2987873/1‑100 (MQ=255)

                                                                                                  ccTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAAc   <  2:2448054/100‑1 (MQ=255)

                                                                                                   cTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACg  <  2:2324889/100‑1 (MQ=255)

                                                                                                   cTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACg  <  2:562252/100‑1 (MQ=255)

                                                                                                   cTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACg  >  2:1268583/1‑100 (MQ=255)

                                                                                                   cTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACg  <  1:597413/100‑1 (MQ=255)

                                                                                                   cTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACg  <  1:12175/100‑1 (MQ=255)

AATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAACCCCGTTCCGCCTCGCAAGGGGCGGAAAACACAATGGAGTGAATATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACG  >  NC_000913/4289113‑4289311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.