New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3246877 =90 (0.830)15 (0.150) 8/164 NT 15.3% coding (226/777 nt) exuR hexuronate regulon transcriptional repressor; autorepressor
?NC_000913 3246902 = 83 (0.830)coding (251/777 nt) exuR hexuronate regulon transcriptional repressor; autorepressor

Only 100 of 153 total aligned reads displayed.

AACGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAGTAATATTG  >  NC_000913/3246778‑3246976
                                                                                                   |                                                                                                   
ttacctgagttgccgcgaattcggcaatattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtc                                                                                                     >  1:979992‑M1/100‑100 (MQ=255)
aaCGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACC                                                                                                     <  1:781361‑M1/100‑1 (MQ=255)
 tacctgagttgccgcgaattcggcaatattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCa                                                                                                    <  1:2429837‑M1/2‑1 (MQ=255)
 aCGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCA                                                                                                    <  1:1154229‑M1/100‑1 (MQ=255)
  cGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCA                                                                                                    >  1:91496‑M1/1‑99 (MQ=255)
   gTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGC                                                                                                  >  2:2399635‑M1/1‑100 (MQ=255)
   gTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTAGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAG                                                                                                   >  2:1428817‑M1/1‑99 (MQ=255)
   cctgagttgccgcgaattcggcaatattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGc                                                                                                  >  1:75242‑M1/97‑100 (MQ=255)
   cctgagttgccgcgaattcggcaatattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGc                                                                                                  <  2:456020‑M1/4‑1 (MQ=255)
   cctgagttgccgcgaattcggcaatattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGc                                                                                                  <  1:2900042‑M1/4‑1 (MQ=255)
      aGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGC                                                                                               >  1:1087057‑M1/1‑100 (MQ=255)
      aGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGC                                                                                               <  2:657045‑M1/100‑1 (MQ=255)
       gCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCcgcg                                                                                              >  1:1562000/1‑100 (MQ=255)
       gCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGC                                                                                               >  2:337156‑M1/1‑99 (MQ=255)
         cGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGcc                                                                                            >  1:1869660/1‑100 (MQ=255)
            ccgcgaattcggcaatattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGCCGCGCCATc                                                                                         <  2:744112‑M1/13‑1 (MQ=255)
              ggTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATcag                                                                                       >  2:1607606/1‑100 (MQ=255)
                  gTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGg                                                                                   <  2:2720095‑M2/100‑2 (MQ=255)
                  gTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGg                                                                                   <  1:1428671‑M2/100‑2 (MQ=255)
                     cGTGAAGCCATCATCATGCTGGAAGTTGAATGCTAAGTCGAACTGCGTAAAGGTTCAGGTATTGATGTGGTTTCCAACCAGCCGCGCCATCAGAAGgggg                                                                                <  1:2430058‑M2/100‑5 (MQ=255)
                     cGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGgcgg                                                                                <  2:1839936‑M2/100‑5 (MQ=255)
                      gTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGgcggc                                                                               >  1:75839‑M2/1‑95 (MQ=255)
                      gTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGgcggc                                                                               >  1:2390419‑M2/1‑95 (MQ=255)
                      gTGAAGCCATCATCATGCTGAAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGgcggc                                                                               >  2:408829‑M2/1‑95 (MQ=255)
                       tGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGgcggct                                                                              >  1:1001409‑M2/1‑94 (MQ=255)
                        caatattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgagttccatattattgtCAGCCGCGCCATCAGCAGGCGGCTg                                                                             >  2:1933169‑M1/76‑100 (MQ=255)
                         aatattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGCCGCGCCATCAGCAGGCGGCTGa                                                                            >  1:2739035‑M1/75‑100 (MQ=255)
                         aaGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGa                                                                            >  2:582895/1‑100 (MQ=255)
                         aaGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGa                                                                            <  1:514033/100‑1 (MQ=255)
                          atattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGCCGCGCCATCAGCAGGCGGCTGAc                                                                           >  1:1806136‑M1/74‑100 (MQ=255)
                          atattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGCCGCGCCATCAGCAGGCGGCTGAc                                                                           >  1:2077220‑M1/74‑100 (MQ=255)
                          aGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCctgctgatggcgcggctggt                                                                           <  2:150600‑M1/100‑21 (MQ=255)
                          aGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGATTTCCAACCAGCCGGctgctgatggcgcggctggt                                                                           <  2:1900562‑M1/100‑21 (MQ=255)
                           tattactttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGCCGCGCCATCAGCAGGCGGCTGACa                                                                          >  1:2496508‑M1/73‑100 (MQ=255)
                           gCCATCATCCTGCTGGCAGTTGAAGGCTATCTCGAAGTGCGCAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCTCTCCATCAGCAGGCGGCTGAc                                                                           >  2:898054/1‑99 (MQ=255)
                            ccATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACaa                                                                         >  2:1100695/1‑100 (MQ=255)
                             catcatcatGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCctgctgatggcgcggctggttag                                                                        >  2:1572848‑M1/1‑77 (MQ=255)
                             catcatcatGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACaat                                                                        >  1:3017417/1‑100 (MQ=255)
                             catcatcatGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACaat                                                                        >  1:402826/1‑100 (MQ=255)
                             catcatcatGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACaat                                                                        >  1:1715315/1‑100 (MQ=255)
                               tcatcatGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACaataa                                                                      >  1:2253132/1‑100 (MQ=255)
                                 tttcgatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGCCGCACCATCAGCAGGCGGCTGACAataata                                                                    >  1:557691‑M1/67‑100 (MQ=255)
                                   catGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATg                                                                  <  1:582896/100‑1 (MQ=255)
                                   catGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATg                                                                  >  2:2332346/1‑100 (MQ=255)
                                     gatgagctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGa                                                                >  1:442732‑M1/63‑100 (MQ=255)
                                      gCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGaa                                                               >  2:2429813/1‑100 (MQ=255)
                                      gCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGaa                                                               >  2:2991394/1‑100 (MQ=255)
                                       cTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAAt                                                              >  1:1134358/1‑100 (MQ=255)
                                         ggAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTc                                                            >  2:1067207/1‑100 (MQ=255)
                                           ctggcgagcctgaagcaactcaaacggaccgtaattggcgaattccatattattgtCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGc                                                          >  1:1676371‑M1/57‑100 (MQ=255)
                                           aaGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGc                                                          <  1:2800461/100‑1 (MQ=255)
                                             gTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCa                                                        <  1:766463/100‑1 (MQ=255)
                                             gTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCa                                                        <  1:1312803/100‑1 (MQ=255)
                                             gTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCa                                                        >  2:2218025/1‑100 (MQ=255)
                                              ttGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCaa                                                       <  2:1715300/100‑1 (MQ=255)
                                              ttGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCaa                                                       >  2:3090881/1‑100 (MQ=255)
                                                   ggCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACg                                                  >  2:2254416/1‑100 (MQ=255)
                                                    gCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACgg                                                 <  1:3013354/100‑1 (MQ=255)
                                                    gCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAACCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACgg                                                 <  1:2381631/100‑1 (MQ=255)
                                                        tGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCg                                             <  2:2746132/100‑1 (MQ=255)
                                                        tGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCg                                             <  1:2564356/100‑1 (MQ=255)
                                                           cGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCGGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGttt                                          >  2:725913/1‑100 (MQ=255)
                                                           cGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGttt                                          >  1:1602373/1‑100 (MQ=255)
                                                            gAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTg                                         <  1:1155236/100‑1 (MQ=255)
                                                              aGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAg                                       <  1:2689495/100‑1 (MQ=255)
                                                              aGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAg                                       <  2:2554163/100‑1 (MQ=255)
                                                               gTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGt                                      >  2:48635/1‑100 (MQ=255)
                                                                tGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGtt                                     <  1:2846725/100‑1 (MQ=255)
                                                                  cGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGc                                   >  1:232744/1‑100 (MQ=255)
                                                                    tAATGGTTCAGGTATTCATGTGTTATCCAACCACCCGCGCCATCTTCAAGGTTCTGAAAATAATATGGAATTCTCCATTTACGGTCCATTTGAgcggat                                  <  2:1224384/99‑6 (MQ=255)
                                                                    tAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCtt                                 >  2:1158842/1‑100 (MQ=255)
                                                                     aaaGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTc                                <  2:2853879/100‑1 (MQ=255)
                                                                      aaGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCa                               <  1:594333/100‑1 (MQ=255)
                                                                       aGGTGCAGGTATTCATGTGGTTTCCAACCAGACGCGCCATCAGCAGGCGGTTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCa                               <  1:2802881/99‑1 (MQ=255)
                                                                        ggTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAgg                             >  1:1579609/1‑100 (MQ=255)
                                                                        ggTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTAAgg                             >  1:2175186/1‑100 (MQ=255)
                                                                         gtaattggcgaattccatattattgtCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTcagcc                            >  1:2880580‑M1/27‑98 (MQ=255)
                                                                            cAGGTATTCATGTGGTTGCCAACCAGCCGCGCAATCATCAGACGGAGGACAATAACATGGAATTCGCCAAGTAAAGTCCGTTTGAGAGGCTTCAGGc                            >  2:1293243/1‑97 (MQ=255)
                                                                              ggTATTCATGTGGTTTCCAACCGGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGcc                       <  1:725915/100‑1 (MQ=255)
                                                                              ggTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGcc                       >  1:1067682/1‑100 (MQ=255)
                                                                              ggTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGcc                       <  1:639086/100‑1 (MQ=255)
                                                                              ggTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGATGCTTCAGGCTCGcc                       <  2:1602359/100‑1 (MQ=255)
                                                                                tATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAg                     >  1:1934450/1‑100 (MQ=255)
                                                                                    cATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCa                 >  1:2579233/1‑100 (MQ=255)
                                                                                    cATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCa                 >  2:42566/1‑100 (MQ=255)
                                                                                     aTGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCAt                <  1:1319789/100‑1 (MQ=255)
                                                                                     aTGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCAt                >  1:1741806/1‑100 (MQ=255)
                                                                                         ggTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGaa            >  1:1987878/1‑100 (MQ=255)
                                                                                          gTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGaaa           <  2:1741791/100‑1 (MQ=255)
                                                                                           tttCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAg          <  1:214717/100‑1 (MQ=255)
                                                                                           tttCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAg          >  2:861186/1‑100 (MQ=255)
                                                                                           tttCCAACAAGCCGCGCCATCAGCAGGGGGCTGACAATAAGATGGGATTCGCCAAATACGGTCCGTTTCAGTTGTTAAAGGCTCGCGCGCTCATCGaa            >  2:401076/1‑98 (MQ=255)
                                                                                            ttCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAGt         <  1:162553/100‑1 (MQ=255)
                                                                                               cAACCAGCCGCGCCATCAGCAGgcggctggttggaaaccacatgaatacctgaacctttacgcacttcgacatagccttcaacttccagcatgatgatgg      <  1:87959‑M2/100‑79 (MQ=255)
                                                                                               cAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAGTAat      >  2:966573/1‑100 (MQ=255)
                                                                                                aaCCAGCCGCGCCATCAGCAGgcggctggttggaaaccacatgaatacctgaacctttacgcacttcgacatagccttcaacttccagcatgatgatgag     <  1:1572861‑M2/100‑80 (MQ=255)
                                                                                                 gacagCCGCctgcagatggcgcggctggttgaaaaccacatgaatacctgaacctttacgcacttcgacatagccttcaacttccagcatgatgatggct    >  1:2099615‑M1/3‑9 (MQ=255)
                                                                                                 aCCAGCCGCGCCATCAGCAGgcggctggttggaaaccacatgaatacctgaacctttacgcacttcgacatagccttcaacttccagcatgatgatggct    <  1:681022‑M2/100‑81 (MQ=255)
                                                                                                 aCCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAGTAatat    <  1:2911960/100‑1 (MQ=255)
                                                                                                  ccAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAGTAATAtt   >  2:2522871/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AACGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAGTAATATTG  >  NC_000913/3246778‑3246976

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.