New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3546221NA (NA)7 (0.070) 6/166 NT NA intergenic (+22/‑338) nfuA/gntT Fe/S biogenesis protein, putative scaffold/chaperone protein/gluconate transporter, high‑affinity GNT I system
?NC_000913 = 3546253 NA (NA)noncoding (32/36 nt) REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 135 total aligned reads displayed.

GCTGAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGC  >  NC_000913/3546124‑3546320
                                                                                                 |                                                                                                   
gctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgc                                                                                                   <  1:1161131‑M1/100‑3 (MQ=255)
 ctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACCCCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgc                                                                                                   >  2:181766‑M1/1‑97 (MQ=255)
  tgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgccc                                                                                                 >  2:625359‑M1/1‑96 (MQ=255)
  tgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgccc                                                                                                 >  1:568682‑M1/1‑96 (MQ=255)
  tgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGAGCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgccc                                                                                                 <  2:1742113‑M1/100‑5 (MQ=255)
       gAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGc                                                                                            <  1:785343/100‑1 (MQ=255)
        aaTTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCg                                                                                           <  2:100243/100‑1 (MQ=255)
         aTTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGa                                                                                          <  1:225149/100‑1 (MQ=255)
          ttCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGAc                                                                                         <  2:1458190/100‑1 (MQ=255)
           tCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACg                                                                                        >  1:1036110/1‑100 (MQ=255)
            cccGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGc                                                                                       >  1:3063151/1‑100 (MQ=255)
                 aGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAg                                                                                  <  1:1099318/100‑1 (MQ=255)
                  gCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGc                                                                                 <  1:465162/100‑1 (MQ=255)
                   cTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTaaa                                                                                   >  2:37702/1‑97 (MQ=255)
                    tGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGt                                                                               <  1:2687940/100‑1 (MQ=255)
                     gAAAGGTGTGCGCGATCTCACTGAAGACCAGCGCGGCGAACTCTCCGACTCCTAAGTTATCTCCTTTTTTGTAGATTGCCAGTTTTGACACTaaa                                                                                   >  2:2341493/1‑95 (MQ=255)
                     gAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTc                                                                              >  2:2887699/1‑100 (MQ=255)
                     gAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTc                                                                              >  2:1546986/1‑100 (MQ=255)
                      aaaGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCa                                                                             <  1:2777154/100‑1 (MQ=255)
                       aaGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCAt                                                                            >  1:934970/1‑100 (MQ=255)
                          gtgtGCGCGATCTCACCGAACAACAGCGCGGAGAACACTACTACTACTACGTTATCACCTGTTTTGTAGATTGCCCGATGAGACGCTTTAGCGTcgcctc                                                                         <  2:2543283/100‑6 (MQ=255)
                            gtgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGG                                                                       >  1:1558285‑M2/1‑100 (MQ=255)
                            gtgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGG                                                                       <  1:3066648‑M2/100‑1 (MQ=255)
                             tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcggg                                                                      <  1:51844‑M1/100‑32 (MQ=255)
                             tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGG                                                                      >  2:233004‑M2/1‑100 (MQ=255)
                               cgcgATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggca                                                                    <  2:95508‑M1/100‑34 (MQ=255)
                                gggatCTCTCCTAACTCCAGCGGGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggc                                                                     <  1:2906256‑M1/96‑33 (MQ=255)
                                  gATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggcaatc                                                                 <  1:1296846‑M1/100‑37 (MQ=255)
                                  gATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTAc                                                                 <  2:805645/100‑1 (MQ=255)
                                     ctcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGtt                                                              >  2:1424736/1‑100 (MQ=255)
                                      tcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTGATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggcaatctaca                                                             <  2:2022875‑M1/100‑41 (MQ=255)
                                       cACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCCTTTCGGGCCTACGTTGa                                                            >  2:742018/1‑100 (MQ=255)
                                       cACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGa                                                            >  2:1319434/1‑100 (MQ=255)
                                         ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                          >  2:2616753/1‑100 (MQ=255)
                                         ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                          >  2:2335065/1‑100 (MQ=255)
                                         ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                          <  1:2294676/100‑1 (MQ=255)
                                             acacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgt                                                      <  1:2088684/100‑1 (MQ=255)
                                             acacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgt                                                      >  2:2005532/1‑100 (MQ=255)
                                              cacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                     <  1:29773/100‑1 (MQ=255)
                                              cacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                     <  1:3006528/100‑1 (MQ=255)
                                              cacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                     >  2:2137440/1‑100 (MQ=255)
                                               acCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGc                                                    >  2:439087/1‑100 (MQ=255)
                                                ccAGCGCGGCGAACACTCCTACTACTAGGTTATCCCCGTTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                     <  2:2188351/98‑1 (MQ=255)
                                                ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   >  2:415561/1‑100 (MQ=255)
                                                ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   <  1:2335087/100‑1 (MQ=255)
                                                ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   >  2:2876171/1‑100 (MQ=255)
                                                ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGc                                                    >  2:815377/1‑99 (MQ=255)
                                                 cAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCa                                                  <  1:188164/100‑1 (MQ=255)
                                                  aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAg                                                 <  2:1036105/100‑1 (MQ=255)
                                                   gcgcGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGa                                                >  1:1188417/1‑100 (MQ=255)
                                                      cggcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACg                                              >  2:1937781/1‑99 (MQ=255)
                                                      cggcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGt                                             >  2:1221090/1‑100 (MQ=255)
                                                         cgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTgg                                          <  2:1638274/100‑1 (MQ=255)
                                                           aaCACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgcg                                        <  2:603354/100‑1 (MQ=255)
                                                           aaCACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgcg                                        <  1:2368944/100‑1 (MQ=255)
                                                           aaCACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGACAGACGTTGgcg                                        <  1:2043317/100‑1 (MQ=255)
                                                             cacTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgca                                      >  1:1151558/1‑100 (MQ=255)
                                                               cTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgcagc                                    <  1:361002/100‑1 (MQ=255)
                                                                 cgatctactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAt                                  <  2:1257805/96‑1 (MQ=255)
                                                                     ctactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCt                              >  1:2815365/1‑100 (MQ=255)
                                                                     ctactaAGTTATCCCCTCTTTTGTAGATTGCACGATGTAACGCTAAGGAGTCGTTGCTGGGCTACGTTAAACATGCGGCAgc                                                >  2:1016270/1‑81 (MQ=255)
                                                                       actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTATGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  2:2090480/1‑100 (MQ=255)
                                                                       actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAtagatcg                            >  1:1257814/1‑94 (MQ=255)
                                                                       actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  1:1013210/1‑100 (MQ=255)
                                                                       actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  2:3012410/1‑100 (MQ=255)
                                                                       actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  2:2928493/1‑100 (MQ=255)
                                                                       actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  2:2164813/1‑100 (MQ=255)
                                                                       actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  1:785347/1‑100 (MQ=255)
                                                                        ctaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTg                           <  2:2947212/100‑1 (MQ=255)
                                                                        ctaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTg                           >  2:1945313/1‑100 (MQ=255)
                                                                          aaGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTc                         >  1:2945214/1‑100 (MQ=255)
                                                                           aGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCa                        <  1:2027551/100‑1 (MQ=255)
                                                                            gTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCaa                       >  2:1681024/1‑100 (MQ=255)
                                                                            gTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCaa                       <  2:2171356/100‑1 (MQ=255)
                                                                                tCCCCTCTTTTGTAGTTTGCCCGTTGCGTCGCTAAAGCGTCATGGCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAAt                     <  2:2926432/98‑1 (MQ=255)
                                                                                tCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATcc                   >  1:2364445/1‑100 (MQ=255)
                                                                                tCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATcc                   >  1:224668/1‑100 (MQ=255)
                                                                                 ccccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCt                  >  2:1935510/1‑100 (MQ=255)
                                                                                   ccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCg                >  1:2540127/1‑100 (MQ=255)
                                                                                   ccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCg                >  2:3016444/1‑100 (MQ=255)
                                                                                    ctctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCgg               >  2:1731734/1‑100 (MQ=255)
                                                                                    ctctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCgg               >  1:810462/1‑100 (MQ=255)
                                                                                      ctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGtt             >  1:1234431/1‑100 (MQ=255)
                                                                                      ctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGtt             <  1:2616780/100‑1 (MQ=255)
                                                                                        tttGTTGATTGCCCGATGAAACGTTAAAGCGTAATTTCGGGCCTACGTTGGATATGTGCCAGACGTTGGCGCATCGTTGCTTTGTCAAATGCGCGGTTCg           <  2:2776963/100‑1 (MQ=255)
                                                                                         ttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGt          >  1:1315554/1‑100 (MQ=255)
                                                                                          tGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCaatctacaaaagaggggatcacttagtagtaggagtgttcgccgcgctggtgttcggtga         <  2:2022875‑M2/100‑61 (MQ=255)
                                                                                            tAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATGGCTTTGTCAAATCCTCGGTTCGTTTc       <  1:379270/100‑1 (MQ=255)
                                                                                            naGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTc       >  2:1609627/2‑100 (MQ=255)
                                                                                             aGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTcc      >  2:505706/1‑100 (MQ=255)
                                                                                             aGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTcc      >  1:2603609/1‑100 (MQ=255)
                                                                                             aGATTGCCCGATGCGACGCTAAAGCGTCAATTCGGGCaatctagaaaagaggggataacgtagtagtaggagtatgcgccgcgatggtgttcagtgagat      <  2:2062086‑M2/100‑64 (MQ=255)
                                                                                              gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCaatctacaaaagaggggataacttagtagtaggagtgttcgccgcgctggtgttcggtgagatc     <  1:1296846‑M2/100‑65 (MQ=255)
                                                                                              gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTccc     >  1:2029903/1‑100 (MQ=255)
                                                                                              gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTccc     >  1:1559403/1‑100 (MQ=255)
                                                                                              gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTccc     >  1:1485800/1‑100 (MQ=255)
                                                                                              gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTccc     <  2:1677871/100‑1 (MQ=255)
                                                                                                ttGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcg   >  2:3064395/1‑100 (MQ=255)
                                                                                                 tGCCCGATGCGACGCTAAAGCGTCATTTCGGGCaatctacaaaagaggggataacttagtagtaggagtgttcgccgcgttggtgttcggtgagatcgcg  <  1:1196031‑M2/100‑68 (MQ=255)
                                                                                                 tGCCCGATGCGACGCTAAAGCGTCATTTCGGGCaatctacaaaagaggggataacttagtagtaggagtgttcgccgcgctggtgttcggtgagatcgcg  <  2:95508‑M2/100‑68 (MQ=255)
                                                                                                 |                                                                                                   
GCTGAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGC  >  NC_000913/3546124‑3546320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.