New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4484382NA (NA)4 (0.040) 4/168 NT NA noncoding (50/84 nt) REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4484420 NA (NA)intergenic (‑140/+20) holC/pepA DNA polymerase III, chi subunit/multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor

Only 100 of 183 total aligned reads displayed.

ATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTG  >  NC_000913/4484283‑4484481
                                                                                                   |                                                                                                   
      cttcttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGt                                                                                               >  2:2800912/1‑100 (MQ=255)
        tcttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCg                                                                                             <  1:2619782/100‑1 (MQ=255)
         cttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCgg                                                                                            <  1:2931041/100‑1 (MQ=255)
         cttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCgg                                                                                            <  1:1530559/100‑1 (MQ=255)
          ttGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTCCGAGTTCAGTGCTGTGTAGGTCgg                                                                                            >  2:1236184/1‑99 (MQ=255)
           tgtgGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGAt                                                                                          >  1:1010156/1‑100 (MQ=255)
            gtggtgGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATa                                                                                         >  1:2371074/1‑100 (MQ=255)
              ggtggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGCGTTCAGTGCTGTGTAGGTCGGATAAg                                                                                       >  2:1055830/1‑100 (MQ=255)
              ggtggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAg                                                                                       >  2:1550437/1‑100 (MQ=255)
                tggATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGc                                                                                     >  2:2460163/1‑100 (MQ=255)
                  gATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGt                                                                                   <  1:1210022/100‑1 (MQ=255)
                  gATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGt                                                                                   <  2:1336160/100‑1 (MQ=255)
                   aTTTAAATACGCATCAGGTATACACCGCAGCGCTTTATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGt                                                                                   <  2:2902594/99‑1 (MQ=255)
                   aTTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGtt                                                                                  >  2:403973/1‑100 (MQ=255)
                   aTTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGtt                                                                                  >  1:1669939/1‑100 (MQ=255)
                      tAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAc                                                                               >  1:930057/1‑100 (MQ=255)
                         aTACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAcgcc                                                                            <  1:409350/100‑1 (MQ=255)
                            cGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCAcgccgc                                                                          >  1:1092423/1‑99 (MQ=255)
                              cATCAGGTATATGCCGCGGCGCCGGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATGCGGCGTGAAcgccttatc                                                                       <  2:2147452/100‑6 (MQ=25)
                              cATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATc                                                                       >  1:1995507/1‑100 (MQ=255)
                              cATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATc                                                                       >  2:626033/1‑100 (MQ=255)
                              cATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATc                                                                       >  2:2535876/1‑100 (MQ=255)
                                 cAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCgg                                                                    >  1:2216342/1‑100 (MQ=255)
                                  aGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGc                                                                   <  1:2663454/100‑1 (MQ=255)
                                   ggTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCa                                                                  <  2:1607279/100‑1 (MQ=255)
                                     tataCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                                                <  2:261835/100‑1 (MQ=255)
                                      ataCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATa                                                               >  2:789312/1‑100 (MQ=255)
                                      ataCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATa                                                               >  1:211834/1‑100 (MQ=255)
                                      ataCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATa                                                               <  1:1410739/100‑1 (MQ=255)
                                        acacCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTtattgccggatgcggcgtgaacgccttatccgacctac                                                               <  1:83411‑M1/98‑39 (MQ=255)
                                           ccGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAacagc                                                          <  2:2681494‑M2/100‑6 (MQ=255)
                                            cGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGcc                                                         <  2:1247297/100‑1 (MQ=255)
                                             gCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCTGGTAGGGCGCTCACGCCGCATCCGGAAATAaca                                                            <  2:2911428‑M2/96‑4 (MQ=255)
                                               aGCGCCTGATGCGGCGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTg                                                      <  1:2602542/100‑1 (MQ=255)
                                                     tGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGAc                                                <  1:1174579/100‑1 (MQ=255)
                                                      gaggCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCGGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACg                                               <  2:498846/97‑1 (MQ=255)
                                                      gATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCTTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACg                                               <  2:1664404/100‑1 (MQ=255)
                                                       aTGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGc                                              >  1:2034673/1‑100 (MQ=255)
                                                        tGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCa                                             >  1:169754/1‑100 (MQ=255)
                                                        tGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCa                                             >  2:727666/1‑100 (MQ=255)
                                                          cGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAAt                                           <  2:2278428/100‑1 (MQ=255)
                                                           gACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAAtt                                          >  1:249436/1‑100 (MQ=255)
                                                             cGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTAc                                        <  1:1753524/100‑1 (MQ=255)
                                                             cGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTAc                                        >  2:2631441/1‑100 (MQ=255)
                                                             cGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTAc                                        <  1:1299727/100‑1 (MQ=255)
                                                               cTGTTGTGTCTTATCAGGCCTACGAGGTCAGGGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGGGTGACGCAAt                                           <  2:1765329/95‑1 (MQ=25)
                                                                tgttgtGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCTGATACGGCGTTCACGCCGCATACGGCAATAACAGCCTTGCCTGACGCAATTActct                                     >  2:1454814/1‑100 (MQ=255)
                                                                  ttgtGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTc                                   <  1:1873002/100‑1 (MQ=255)
                                                                  ttgtGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTc                                   <  1:2345696/100‑1 (MQ=255)
                                                                   tgtgTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCg                                  <  1:727064/100‑1 (MQ=255)
                                                                    gtgtCTTATCAGGCCTACGAGTTCAGTGCTGTtattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagac                                 <  1:1647945‑M1/100‑69 (MQ=255)
                                                                     tgtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGcc                                <  1:575183/100‑1 (MQ=255)
                                                                      gtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCg                               >  1:1570742/1‑100 (MQ=255)
                                                                      gtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCg                               <  2:45300/100‑1 (MQ=255)
                                                                      gtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCg                               <  2:1499422/100‑1 (MQ=255)
                                                                       tCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGt                              >  1:1732180/1‑100 (MQ=255)
                                                                       tCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGt                              >  1:1841907/1‑100 (MQ=255)
                                                                        cTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGtt                             <  1:2153672/100‑1 (MQ=255)
                                                                        cTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGtt                             >  2:316826/1‑100 (MQ=255)
                                                                         ttATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTa                            >  1:169423/1‑100 (MQ=255)
                                                                         ttATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTa                            <  1:3013154/100‑1 (MQ=255)
                                                                         ttATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTa                            <  1:66358/100‑1 (MQ=255)
                                                                          tATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTaa                           >  2:1266035/1‑100 (MQ=255)
                                                                          tATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTaa                           <  2:2353133/100‑1 (MQ=255)
                                                                          tATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTaa                           >  1:299279/1‑100 (MQ=255)
                                                                           aTCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTaaa                          >  1:2856807/1‑100 (MQ=255)
                                                                             cAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACTGCATTGCCTGACGCCATTACTCTTCGCCGTTAAAcc                        >  2:3045910/1‑100 (MQ=255)
                                                                              aGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAAccc                       >  2:1467636/1‑100 (MQ=255)
                                                                               ggCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAAccc                       >  2:642709/1‑99 (MQ=255)
                                                                                gcgtACGAGTTCAGTGCTGTGAAGATCGGATAAGCCGTGTACGCGGCAGGAGGGAATAAAAGGATTGCATGACACAATTAGTATTAGCCGTTaaa                          >  2:2711321/4‑95 (MQ=255)
                                                                                  cTACGAGTTCAGCGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAgcg                   >  1:2039390/1‑100 (MQ=255)
                                                                                   tACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAgcgc                  <  1:403975/100‑1 (MQ=255)
                                                                                   tACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAgcg                   <  2:1092418/99‑1 (MQ=255)
                                                                                    aCGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGcgcg                 >  1:1426998/1‑100 (MQ=255)
                                                                                    aCGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGcgcg                 <  1:1306135/100‑1 (MQ=255)
                                                                                      gAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAacagcactgaactcgtaggcctgataagacacaacagcgtcgcatca                <  2:1481459‑M2/99‑48 (MQ=255)
                                                                                      gAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGt               <  2:362908/100‑1 (MQ=255)
                                                                                        gTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGttt             >  2:957168/1‑100 (MQ=255)
                                                                                          tCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTaa           <  2:1191544/100‑1 (MQ=255)
                                                                                           cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAacagcactgaactcgtaggcctgataagacacaacagcgtcgcatcaggcgct          <  1:745527‑M2/100‑54 (MQ=255)
                                                                                           cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAAc          <  2:2436814/100‑1 (MQ=255)
                                                                                           cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAAc          <  1:1370549/100‑1 (MQ=255)
                                                                                           cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAAc          <  1:2713832/100‑1 (MQ=255)
                                                                                            aGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACa         <  1:1251283/100‑1 (MQ=255)
                                                                                            aGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACa         >  2:2259532/1‑100 (MQ=255)
                                                                                             gTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAg        <  2:1412330/100‑1 (MQ=255)
                                                                                             gTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAg        >  1:1609375/1‑100 (MQ=255)
                                                                                             gTGCTCTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAg        <  2:1836014/100‑1 (MQ=255)
                                                                                              tGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAgg       <  1:850318/100‑1 (MQ=255)
                                                                                              tGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAgg       <  1:315939/100‑1 (MQ=255)
                                                                                               gCTGTtattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacacaacagcgtcgcatcaggcgctgcgg      <  1:2464234‑M1/100‑96 (MQ=255)
                                                                                                 tgtgTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAAc    <  1:2521724/100‑1 (MQ=255)
                                                                                                 tGTtattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacacaacagcgtcgcatcaggcgctgcggtg    <  1:984056‑M1/100‑98 (MQ=255)
                                                                                                 tGTtattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacacaacagcgtcgcatcaggcgctgcggtg    >  2:1448997‑M1/1‑3 (MQ=255)
                                                                                                 tGTtattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacacaacagcgtcgcatcaggcgctgcggtg    >  1:723869‑M1/1‑3 (MQ=255)
                                                                                                 tGTtattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacacaacagcgtcgcatcaggcgctgcggtg    <  2:2250153‑M1/100‑98 (MQ=255)
                                                                                                   ttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacacaacagcgtcgcatcaggcgctgcggtgta  <  2:1528493‑M1/100‑100 (MQ=255)
                                                                                                   ttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacacaacagcgtcgcatcaggcgctgcggtgta  <  1:2148679‑M1/100‑100 (MQ=255)
                                                                                                   ttattgccggatgcggcgtgaacgccttatccgacctacacagcactgaactcgtaggcctgataagacacaacagcgtcgcatcaggcgctgcggtgta  >  1:1692670‑M1/1‑1 (MQ=255)
                                                                                                   tgtAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACtg  >  1:2402014/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATGGGGCTTCTTGTGGTGGATTTAAATACGCATCAGGTATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTG  >  NC_000913/4484283‑4484481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.