BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4484382	NA (NA)	4 (0.040)	4/168	NT	NA	noncoding (50/84 nt)	REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP342 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 4484420	NA (NA)	4 (0.040)	4/168	NT	NA	intergenic (‑140/+20)	holC/pepA	DNA polymerase III, chi subunit/multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor

Only 100 of 192 total aligned reads displayed.

ATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTG  >  NC_000913/4484321‑4484519

ataCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATa                                                                                                     >  1:211834/1‑100 (MQ=255)

ataCACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATa                                                                                                     <  1:1410739/100‑1 (MQ=255)

 tACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAa                                                                                                    >  1:1692670‑M2/1‑99 (MQ=255)

   cacCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAaca                                                                                                  >  1:723869‑M2/1‑97 (MQ=255)

   cacCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAaca                                                                                                  <  1:984056‑M2/100‑4 (MQ=255)

      cGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGcc                                                                                               <  2:1247297/100‑1 (MQ=255)

          gcgcCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGc                                                                                           >  1:1958567/1‑100 (MQ=255)

           cgcCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGcc                                                                                          >  2:2705850/1‑100 (MQ=255)

           cgcCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGcc                                                                                          <  1:2653691/100‑1 (MQ=255)

           cgcCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGcc                                                                                          <  2:2434352/100‑1 (MQ=255)

            gcCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCt                                                                                         >  1:1860944/1‑100 (MQ=255)

             ccTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTg                                                                                        <  2:2843569/100‑1 (MQ=255)

               tGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGAc                                                                                      <  1:1174579/100‑1 (MQ=255)

                gaggCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCGGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACg                                                                                     <  2:498846/97‑1 (MQ=255)

                gATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATACGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACg                                                                                     >  2:2004709/1‑100 (MQ=255)

                gATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCTTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACg                                                                                     <  2:1664404/100‑1 (MQ=255)

                  tGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCa                                                                                   >  2:727666/1‑100 (MQ=255)

                  tGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCa                                                                                   >  1:169754/1‑100 (MQ=255)

                     gACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAAtt                                                                                >  1:249436/1‑100 (MQ=255)

                       cGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTAc                                                                              <  1:1753524/100‑1 (MQ=255)

                       cGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTAc                                                                              <  1:1299727/100‑1 (MQ=255)

                       cGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTAc                                                                              >  2:2631441/1‑100 (MQ=255)

                          tgttgtGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCTGATACGGCGTTCACGCCGCATACGGCAATAACAGCCTTGCCTGACGCAATTActct                                                                           >  2:1454814/1‑100 (MQ=255)

                          tgttgtGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTActct                                                                           <  2:1506312/100‑1 (MQ=255)

                             tgtgTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCg                                                                        <  1:727064/100‑1 (MQ=255)

                               tgtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGcc                                                                      <  2:1576388/100‑1 (MQ=255)

                               tgtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGcc                                                                      <  1:575183/100‑1 (MQ=255)

                               tgtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGcc                                                                      >  2:639018/1‑100 (MQ=255)

                                gtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCg                                                                     <  1:835581/100‑1 (MQ=255)

                                gtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCg                                                                     >  1:1570742/1‑100 (MQ=255)

                                gtCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCg                                                                     <  2:45300/100‑1 (MQ=255)

                                 tCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGt                                                                    >  1:1841907/1‑100 (MQ=255)

                                  cTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGtt                                                                   >  2:316826/1‑100 (MQ=255)

                                   ttATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTa                                                                  <  1:3013154/100‑1 (MQ=255)

                                    tATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGtt                                                                   <  1:1682860/98‑1 (MQ=255)

                                    tATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTaa                                                                 >  1:2991686/1‑100 (MQ=255)

                                     aTCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTaaa                                                                >  1:2856807/1‑100 (MQ=255)

                                        aGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAAccc                                                             >  1:1639789/1‑100 (MQ=255)

                                          gcgtACGAGTTCAGTGCTGTGAAGATCGGATAAGCCGTGTACGCGGCAGGAGGGAATAAAAGGATTGCATGACACAATTAGTATTAGCCGTTaaa                                                                >  2:2711321/4‑95 (MQ=255)

                                          gCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAg                                                           <  1:8335/100‑1 (MQ=255)

                                          gCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAg                                                           >  1:1219271/1‑100 (MQ=255)

                                           ccTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAgc                                                          >  1:406487/1‑100 (MQ=255)

                                            cTACGAGTTCAGCGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAgcg                                                         >  1:2039390/1‑100 (MQ=255)

                                             tACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAgcg                                                         <  2:1092418/99‑1 (MQ=255)

                                                gAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAacagcactgaactcgtaggcctgataagacacaacagcgtcgcatca                                                      <  2:1481459‑M2/99‑48 (MQ=255)

                                                 aGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGtt                                                    >  2:407648/1‑100 (MQ=255)

                                                  gTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGttt                                                   >  2:388361/1‑100 (MQ=255)

                                                  gTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGttt                                                   >  2:957168/1‑100 (MQ=255)

                                                  gTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGttt                                                   >  1:218873/1‑100 (MQ=255)

                                                    tCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTaa                                                 <  2:1191544/100‑1 (MQ=255)

                                                     cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAAc                                                <  1:1370549/100‑1 (MQ=255)

                                                     cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAAc                                                <  1:2586284/100‑1 (MQ=255)

                                                     cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAAc                                                <  1:2713832/100‑1 (MQ=255)

                                                     cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAAc                                                >  1:2436838/1‑100 (MQ=255)

                                                     cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAAc                                                >  2:1381153/1‑100 (MQ=255)

                                                     cAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAAc                                                <  1:1322186/100‑1 (MQ=255)

                                                      aGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACa                                               <  1:1251283/100‑1 (MQ=255)

                                                      aGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACa                                               <  1:2310730/100‑1 (MQ=255)

                                                      aGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACa                                               >  2:2259532/1‑100 (MQ=255)

                                                      aGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACa                                               <  1:15354/100‑1 (MQ=255)

                                                       gTGCTGTGTAGGTCGGATAAGGCGTTCACGCGGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACa                                               <  2:673496/99‑1 (MQ=255)

                                                       gTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAg                                              <  2:1412330/100‑1 (MQ=255)

                                                       gTGCTCTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAg                                              <  2:1836014/100‑1 (MQ=255)

                                                        tGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAgg                                             <  1:315939/100‑1 (MQ=255)

                                                         gCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGa                                            <  2:351879/100‑1 (MQ=255)

                                                         gCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGa                                            <  1:399898/100‑1 (MQ=255)

                                                             tgtAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACtg                                        >  1:2402014/1‑100 (MQ=255)

                                                              gtAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACtgt                                       >  1:2528675/1‑100 (MQ=255)

                                                              gtAAGTCGGATAAGGCGTTAAAGCTGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACtgt                                       <  2:654498/100‑1 (MQ=255)

                                                               tAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGTAACtgtg                                      >  2:1032489/1‑100 (MQ=255)

                                                                 ggTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGcc                                    <  1:2723949/100‑1 (MQ=255)

                                                                  gTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCa                                   >  1:2893055/1‑100 (MQ=255)

                                                                    cGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGc                                 <  2:1388974/100‑1 (MQ=255)

                                                                    cGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGc                                 >  1:10706/1‑100 (MQ=255)

                                                                     ggATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCa                                >  2:1754088/1‑100 (MQ=255)

                                                                     ggATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCa                                >  2:3074184/1‑100 (MQ=255)

                                                                          aGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCt                           >  1:3083249/1‑100 (MQ=255)

                                                                           ggCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTa                          >  1:650532/1‑100 (MQ=255)

                                                                           ggCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTa                          >  2:2324706/1‑100 (MQ=255)

                                                                           ggCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTa                          >  2:1583771/1‑100 (MQ=255)

                                                                             cGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTACCAGGAACTGTGCCAGCAACGCTAcc                        >  2:216164/1‑100 (MQ=255)

                                                                                tCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGga                     <  1:2217604/100‑1 (MQ=255)

                                                                                 cACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGgac                    >  2:842201/1‑100 (MQ=255)

                                                                                 cACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGgac                    <  1:2149404/100‑1 (MQ=255)

                                                                                  aCGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGgacg                   <  1:2729795/100‑1 (MQ=255)

                                                                                    gccgcATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGgacgac                 <  2:2216322/100‑1 (MQ=255)

                                                                                    gccgcATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGgacgac                 <  1:76511/100‑1 (MQ=255)

                                                                                    gccgcATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCATTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGgacgac                 >  2:686953/1‑100 (MQ=255)

                                                                                     ccgcATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGgacgac                 <  2:20628/99‑1 (MQ=255)

                                                                                          tCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTgg           <  1:417275/100‑1 (MQ=255)

                                                                                           ccGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGgc          <  2:1356502/100‑1 (MQ=255)

                                                                                           ccGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCCACCGGTCGTCCGGTAgc          <  1:672572/100‑1 (MQ=255)

                                                                                             tgCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGTCAGCAACGCCACCGGTCGTCCGGTAgcgt        <  1:1741324/99‑2 (MQ=255)

                                                                                              ctaaTAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGcc       <  1:2385998/98‑1 (MQ=255)

                                                                                               tcttAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCt      <  1:1015298/97‑1 (MQ=255)

                                                                                               cAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCt      >  2:1186181/1‑100 (MQ=255)

                                                                                               cAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCCACCGGTCGTCCGGTAgcgttg      <  1:2255674/100‑4 (MQ=255)

                                                                                                aaTAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCCACCGGTCGTCCGGTAgcgttgc     <  1:1790451/100‑5 (MQ=38)

                                                                                                aaTAACAGCCTAGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGccag     >  2:2385976/1‑98 (MQ=255)

                                                                                                 aTAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCCACCGGTCGTCCGGTAgcgttgct    <  2:2991657/100‑6 (MQ=38)

ATACACCGCAGCGCCTGATGCGACGCTGTTGTGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGGCAATAACAGCCTTGCCTGACGCAATTACTCTTCGCCGTTAAACCCAGCGCGGTTTAACAGGAACTGTGCCAGCAACGCTACCGGACGACCGGTGGCGCCTTTTG  >  NC_000913/4484321‑4484519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.