New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 462789277 (0.710)4 (0.040) 4/164 NT 4.7% coding (578/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 = 4627903 91 (0.910)coding (589/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 131 total aligned reads displayed.

GCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGT  >  NC_000913/4627793‑4627991
                                                                                                   |                                                                                                   
gCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGCTCTGATCTACACCTCGGAAGAAACCGATGCGACCCAGTATATGGAACATATGGGGATCGA                                                                                                     >  2:498653‑M1/1‑100 (MQ=255)
gCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGA                                                                                                     <  1:1157594‑M1/100‑1 (MQ=255)
gCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGA                                                                                                     <  1:2770625‑M1/100‑1 (MQ=255)
  aTCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCgaga                                                                                                   >  1:788687/1‑100 (MQ=255)
  aTCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCgaga                                                                                                   <  1:1397114/100‑1 (MQ=255)
   tCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGAc                                                                                                  >  2:2584432/1‑100 (MQ=255)
   tCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGAc                                                                                                  <  2:2009721/100‑1 (MQ=255)
    naaaaaGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACg                                                                                                 >  1:427560/2‑100 (MQ=255)
    cAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACg                                                                                                 >  2:1294777/1‑100 (MQ=255)
     aaaaaGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACgg                                                                                                >  2:1440935/1‑100 (MQ=255)
        aaGTTTAGGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGc                                                                                             <  2:286974/100‑1 (MQ=255)
         aGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCt                                                                                            <  1:2573379/100‑1 (MQ=255)
         aGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCt                                                                                            <  2:1654484/100‑1 (MQ=255)
          gTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTg                                                                                           >  1:1810765/1‑100 (MQ=255)
           tttATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTgg                                                                                          <  1:1471193/100‑1 (MQ=255)
           tttATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTgg                                                                                          <  1:1971359/100‑1 (MQ=255)
            ttATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGt                                                                                         <  1:2988191‑M2/100‑2 (MQ=255)
                gtctgAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                     >  1:1813099‑M2/3‑95 (MQ=255)
                ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                     >  2:365929‑M2/1‑95 (MQ=255)
                ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                     <  2:2797829‑M2/100‑6 (MQ=255)
                ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcga                                                                                      <  2:2883795‑M2/99‑5 (MQ=255)
                 gCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                    <  1:240877‑M2/100‑7 (MQ=255)
                  cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                   <  1:952319‑M2/100‑8 (MQ=255)
                  cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                   >  2:1493262‑M2/1‑93 (MQ=255)
                  cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                     >  2:2728892‑M2/1‑93 (MQ=255)
                     aaaaaGGGAGCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatcccca                                                                                <  1:1951356‑M1/100‑22 (MQ=255)
                       aaaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatccccaga                                                                              <  1:504068‑M1/100‑24 (MQ=255)
                          gggATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTa                                                                           >  2:943436/1‑100 (MQ=255)
                                cAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTa                                                                     <  2:1571655/100‑1 (MQ=255)
                                 aGCCGGATCTGATCTACACCTCGGATGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatccccagatgttccatat                                                                    <  1:1950291‑M1/100‑34 (MQ=255)
                                  gCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATg                                                                   <  1:1566137/100‑1 (MQ=255)
                                  gCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATg                                                                   <  1:2588889/100‑1 (MQ=255)
                                    cGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAg                                                                 <  1:1478088/100‑1 (MQ=255)
                                    cGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAg                                                                 <  2:2582763/100‑1 (MQ=255)
                                         ctgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGCTCCGAAACGTACCTTTATGAGTATc                                                             >  2:1576331/1‑99 (MQ=255)
                                          tgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAg                                                           <  1:2505511/100‑1 (MQ=255)
                                          tgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAg                                                           >  2:2716542/1‑100 (MQ=255)
                                          tgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAg                                                           >  1:230781/1‑100 (MQ=255)
                                           gatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGc                                                          >  1:1457317/1‑100 (MQ=255)
                                             tctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCgg                                                        >  2:2272982/1‑100 (MQ=255)
                                                acacCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTgc                                                     <  2:1666795/100‑1 (MQ=255)
                                                   ccTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCa                                                  <  2:2303363/100‑1 (MQ=255)
                                                   ccTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCa                                                  >  1:3101052/1‑100 (MQ=255)
                                                   ccTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCa                                                  >  1:2167849/1‑100 (MQ=255)
                                                   ccTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCa                                                  <  1:1941849/100‑1 (MQ=255)
                                                   ccTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCa                                                  <  2:788685/100‑1 (MQ=255)
                                                   ccTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCa                                                  >  1:2479130/1‑100 (MQ=255)
                                                    ntCGGAAGAAGCCGATGAGCCACAGTATATGGAACACCTGGGGATCAAGACGGTGCAGGTCGATCCGAAACGAACCTTTATGAGTATCAGCGGTGCGAAg                                                 >  2:1990312/2‑100 (MQ=255)
                                                     tCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGa                                                >  2:2962999/1‑100 (MQ=255)
                                                       ggAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGAGCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGGGGTGCGCAGATc                                              >  2:320356/1‑100 (MQ=255)
                                                           gaagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGGGCGCAGATCcgcg                                          >  2:471398/1‑100 (MQ=255)
                                                            aagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGa                                         <  2:2429354/100‑1 (MQ=255)
                                                             agCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaa                                        >  2:1701483/1‑100 (MQ=255)
                                                              gCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaaa                                       >  1:231325/1‑100 (MQ=255)
                                                                cGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAc                                     <  1:1975169/100‑1 (MQ=255)
                                                                cGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAc                                     <  1:420426/100‑1 (MQ=255)
                                                                     cgcCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGtt                                >  1:2386809/1‑100 (MQ=255)
                                                                       ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                              <  2:2974217/100‑1 (MQ=255)
                                                                       ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                              >  2:3064849/1‑100 (MQ=255)
                                                                       ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                              >  1:573469/1‑100 (MQ=255)
                                                                       ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                              >  1:196596/1‑100 (MQ=255)
                                                                        cacaGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCg                             <  2:866651/100‑1 (MQ=255)
                                                                          gatcttatGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCt                           <  2:920630/95‑1 (MQ=255)
                                                                          caGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCt                           <  1:1922119/100‑1 (MQ=255)
                                                                              atatGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTg                       >  2:2952769/1‑100 (MQ=255)
                                                                               tatGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTagatc                      >  1:920634/1‑96 (MQ=255)
                                                                                atGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTggg                     >  2:2820192/1‑100 (MQ=255)
                                                                                atGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTggg                     <  1:111960/100‑1 (MQ=255)
                                                                                 tGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGa                    <  1:2842593/100‑1 (MQ=255)
                                                                                 tGGAACAGCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGa                    <  1:717923/100‑1 (MQ=255)
                                                                                   gAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAat                  >  2:1508950/1‑100 (MQ=255)
                                                                                   gAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAat                  <  1:2749061/100‑1 (MQ=255)
                                                                                   gAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAat                  >  2:365444/1‑100 (MQ=255)
                                                                                        tCTGGGGATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatcccttt             <  1:504068‑M2/100‑78 (MQ=255)
                                                                                        tCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATAtt             >  1:2534970/1‑100 (MQ=255)
                                                                                          tGGGGATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggctcccttttt           <  1:1951356‑M2/100‑80 (MQ=255)
                                                                                          tGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTcc           <  2:239009/100‑1 (MQ=255)
                                                                                          tGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTcc           <  1:2618023/100‑1 (MQ=255)
                                                                                          tGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTcc           <  1:1046025/100‑1 (MQ=255)
                                                                                           ggggATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCt          >  1:933748/1‑100 (MQ=255)
                                                                                             ggATCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcag        >  2:1493262‑M1/1‑7 (MQ=255)
                                                                                             ggATCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcag        <  1:952319‑M1/100‑94 (MQ=255)
                                                                                             ggATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcag        <  2:1981713‑M2/100‑83 (MQ=255)
                                                                                             ggATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTAc        <  1:1707489/100‑1 (MQ=255)
                                                                                              gATCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagc       <  1:240877‑M1/100‑95 (MQ=255)
                                                                                              gATCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagc       <  1:936904‑M1/100‑95 (MQ=255)
                                                                                              gATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTAcc       >  1:1105535/1‑100 (MQ=255)
                                                                                              gATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTAcc       <  1:1475160/100‑1 (MQ=255)
                                                                                               aTCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagcc      <  2:2797829‑M1/100‑96 (MQ=255)
                                                                                               aTCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcag        >  2:2728892‑M1/1‑5 (MQ=255)
                                                                                               aTCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCg      >  1:37014/1‑100 (MQ=255)
                                                                                               aTCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCg      <  1:2329487/100‑1 (MQ=255)
                                                                                               aTCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCg      >  1:1519699/1‑100 (MQ=255)
                                                                                                tCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagcc      <  2:2883795‑M1/99‑96 (MQ=255)
                                                                                                  gagaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAg   >  1:259991/1‑100 (MQ=255)
                                                                                                  gagaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAg   <  2:805011/100‑1 (MQ=255)
                                                                                                  gagaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAg   >  2:2171265/1‑100 (MQ=255)
                                                                                                  gagaCGGTGCTGGTCGATCCGAAACGTACCTTGATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAg   <  2:726853/100‑1 (MQ=255)
                                                                                                  gagaCGGTACTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAg   <  2:1103825/100‑1 (MQ=255)
                                                                                                   agaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGt  >  2:294599/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGT  >  NC_000913/4627793‑4627991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.