| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 730045 | NA (NA) | 11 (0.110) | 7/168 | NT | NA | coding (463/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 730067 | NA (NA) | coding (485/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor | |||||
TATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCT > NC_000913/729946‑730144 | cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc < 1:183018‑M1/5‑1 (MQ=255)cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc < 2:2924148‑M1/5‑1 (MQ=255)cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc < 1:3080428‑M1/5‑1 (MQ=255)cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc > 1:640797‑M1/96‑100 (MQ=255)cgcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatacggacttaagcggagttcttCCGGc > 2:1728379‑M1/96‑100 (MQ=255) gcttccggcacccgctcacaccaaccgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGc < 2:2901938‑M1/5‑1 (MQ=255) cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCg > 1:1513989‑M1/70‑100 (MQ=255) cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGC‑‑‑‑CGCACTCTGGCAGTCGCTGCCGgaag > 2:974585‑M1/70‑100 (MQ=255) gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCgg > 2:2620713‑M1/69‑100 (MQ=255) agcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGga > 1:1780549‑M1/68‑100 (MQ=255) gcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGgaa > 2:16806‑M1/67‑100 (MQ=255) cagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGgaag > 2:1164400‑M1/66‑100 (MQ=255) accacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTc > 1:837154‑M1/61‑100 (MQ=255) CCGGCTGGCCGCACCCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTc < 1:98359‑M1/100‑1 (MQ=255) CGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCg > 1:2549436‑M1/1‑100 (MQ=255) GGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCgg < 1:201092‑M1/100‑1 (MQ=255) GCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGc > 1:1878197‑M1/1‑100 (MQ=255) CTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCt < 1:75784‑M1/100‑1 (MQ=255) | TATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCT > NC_000913/729946‑730144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |