New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 730045	NA (NA)	11 (0.110)	7/168	NT	NA	coding (463/4194 nt)	rhsC	Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 730067	NA (NA)					coding (485/4194 nt)	rhsC	Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor

GGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGC  >  NC_000913/729972‑730166                                                                                                |                                                                                                    cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCg                                                                                                 >  1:1513989‑M1/70‑100 (MQ=255) cgagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGC‑‑‑‑CGCACTCTGGCAGTCGCTGCCGgaag                                                                                             >  2:974585‑M1/70‑100 (MQ=255)  gagcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCgg                                                                                                >  2:2620713‑M1/69‑100 (MQ=255)   agcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGga                                                                                               >  1:1780549‑M1/68‑100 (MQ=255)    gcagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGgaa                                                                                              >  2:16806‑M1/67‑100 (MQ=255)     cagccaccacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGgaag                                                                                             >  2:1164400‑M1/66‑100 (MQ=255)          accacggcccctgcggactgtttgtcgccagataacgatgcggacttaagcggagttcttCCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTc                                                                                        >  1:837154‑M1/61‑100 (MQ=255)                                                                      CCGGCTGGCCGCACCCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTc                            <  1:98359‑M1/100‑1 (MQ=255)                                                                       CGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCg                           >  1:2549436‑M1/1‑100 (MQ=255)                                                                        GGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCgg                          <  1:201092‑M1/100‑1 (MQ=255)                                                                         GCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGc                         >  1:1878197‑M1/1‑100 (MQ=255)                                                                          CTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCt                        <  1:75784‑M1/100‑1 (MQ=255)                                                                           tGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTg                       <  1:2009554/100‑1 (MQ=32)                                                                            ggCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTgg                      >  1:308796/1‑100 (MQ=33)                                                                            ggCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTgg                      >  2:3089662/1‑100 (MQ=33)                                                                             gCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGgt                     >  1:2123354/1‑100 (MQ=33)                                                                              ccGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGgtg                    <  2:1451344/100‑1 (MQ=33)                                                                              ccGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGgtg                    <  2:1337095/100‑1 (MQ=33)                                                                               cGCACTCTGGCAGGCGCTGCCGGAAGAACTACGGTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCACGGCTGgtgt                   >  2:2046448/1‑100 (MQ=255)                                                                                  aCTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAg                <  2:1688982/100‑1 (MQ=33)                                                                                  aCTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAg                <  1:2892903/100‑1 (MQ=33)                                                                                   ctctGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGc               >  1:1725148/1‑100 (MQ=33)                                                                                   ctctGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGc               >  2:860823/1‑100 (MQ=33)                                                                                   ctctGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGc               <  1:319447/100‑1 (MQ=33)                                                                                     ctGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCgg             >  1:942273/1‑100 (MQ=33)                                                                                      tGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCggg            <  2:899557/100‑1 (MQ=32)                                                                                      tGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCggg            <  1:2022787/100‑1 (MQ=32)                                                                                       ggCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCggg            <  2:2508149/99‑1 (MQ=32)                                                                                       ggCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGt           >  1:1876498/1‑100 (MQ=33)                                                                                        gCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGtn          <  2:977277/100‑2 (MQ=18)                                                                                        gCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTg          >  2:545493/1‑100 (MQ=33)                                                                                         cAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGc         >  2:1739405/1‑100 (MQ=33)                                                                                         cAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGc         >  1:690301/1‑100 (MQ=33)                                                                                           ggCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCg       >  1:2773087/1‑100 (MQ=33)                                                                                           ggCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCg       >  2:873858/1‑100 (MQ=32)                                                                                             cgcTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCgg      >  2:3012032/1‑99 (MQ=33)                                                                                             cgcTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTACTCGGCTGGTGTGAGCGGGTGCCGGa     >  1:2445390/1‑100 (MQ=17)                                                                                             cgcTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTCATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGa     <  2:713292/100‑1 (MQ=18)                                                                                               cTGCCGGAAGAACTCCGCTTCAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAg   >  2:1897286/1‑100 (MQ=18)                                                                                                tGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGc  <  2:1205911/100‑1 (MQ=33)                                                                                                |                                                                                                    GGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGC  >  NC_000913/729972‑730166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.