New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 900753 =NA (NA)3 (0.030) 3/164 NT NA noncoding (5/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 900783 = NA (NA)noncoding (35/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 148 total aligned reads displayed.

ATATGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAA  >  NC_000913/900654‑900851
                                                                                                   |                                                                                                  
cgaacggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtg                                                                                                    <  2:2668171‑M1/1‑1 (MQ=255)
atatGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAgg                                                                                                    >  1:1998688/1‑100 (MQ=255)
atatGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACGATGTAgg                                                                                                    <  1:1635753/100‑1 (MQ=255)
 tatGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGc                                                                                                   <  1:491264/100‑1 (MQ=255)
 tatGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGc                                                                                                   <  2:1323388/100‑1 (MQ=255)
  atGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGGCGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGcc                                                                                                  >  1:1052507/1‑100 (MQ=255)
  atGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTAATTATAAGAATTTATGCACTATGTAGGcc                                                                                                  >  2:344437/1‑100 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                 <  1:2515661/100‑1 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGACCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                 >  1:188701/1‑100 (MQ=255)
   tGCAATAAACATGATTAAATAATTGAAATGAACTAAAAAAGACGTACAACCTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                 <  1:2942639/100‑1 (MQ=255)
   acggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCg                                                                                                 >  1:221101‑M1/97‑100 (MQ=255)
    gCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCgg                                                                                                >  1:2115133/1‑100 (MQ=255)
    cggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCgg                                                                                                >  2:1275556‑M1/96‑100 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGcc                                                                                                  >  2:684013/1‑97 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGa                                                                                               >  1:451265/1‑100 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGa                                                                                               >  2:187820/1‑100 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGa                                                                                               >  2:2200885/1‑100 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGa                                                                                               >  2:516232/1‑100 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGCCTTCATTATAAGAATTTATGCACGATGTAGGCCGGa                                                                                               <  2:1952053/100‑1 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCAGTCTTCATTATAAGAATTTATGCACTATGTAGGCCgg                                                                                                >  2:2720982/1‑99 (MQ=255)
      attAAACATAATTAAATAATTTAAAAAAAATAATATAGAAATAATACTTATTAGGTTGTCCGTCTTGATTATAATAATTTATTCAACATGTAGGACGGa                                                                                               <  2:562298/97‑1 (MQ=255)
       cgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGAt                                                                                              <  2:1529353‑M1/7‑1 (MQ=255)
       aTAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATa                                                                                             <  1:1777675/100‑1 (MQ=255)
          aaCATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAgg                                                                                          <  1:3089141/100‑1 (MQ=255)
            cATGATTAAATAATTTAAATGAAATAAAAAAGACTGACAACATAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCg                                                                                        >  2:416137/1‑100 (MQ=255)
            cATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCg                                                                                        <  2:2336820/100‑1 (MQ=255)
            cATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGAGTTGTCCGTCTTCATTATAAGAAACTATGCACTATGTATGCCGGATAAGGCg                                                                                        >  2:296846/1‑100 (MQ=255)
              tGATTAAATAATTTAAATGAAATAAAAAAGTCGGACAACTTAGTGGGATGTACGTAAAAAATATAAGAATTTATGGAGTGGGTAGTCCGGATaatga                                                                                         >  2:626949/1‑94 (MQ=255)
              tGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTc                                                                                      <  1:2843489/100‑1 (MQ=255)
                aTTAAATAATTTAAATGAAATAGAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTcc                                                                                     >  2:1099016/1‑99 (MQ=255)
                aTTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCATATTAAATATAGGAATTTATGCACTATGTAGGCCGGATAAGGAGTccc                                                                                    >  2:494060/1‑100 (MQ=255)
                        atTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCAt                                                                            >  2:154809/1‑100 (MQ=255)
                         tttAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGGCCGTCATAATTATGAGAAGCTATGCGCTAGGTAGGCCGGCTCAGACATCATCGCCGCATc                                                                           >  2:1022788/1‑100 (MQ=255)
                          ttAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATcc                                                                          >  1:1617394/1‑100 (MQ=255)
                          ttAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATcc                                                                          <  1:516234/100‑1 (MQ=255)
                           tAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCg                                                                         >  1:834448/1‑100 (MQ=255)
                            aaaTGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCgg                                                                        <  2:3105609/100‑1 (MQ=255)
                            aaaTGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCgg                                                                        >  2:1621072/1‑100 (MQ=255)
                             attcgtcggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGc                                                                       >  1:378925‑M1/71‑100 (MQ=255)
                               tcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGcac                                                                     >  1:1233399‑M1/69‑100 (MQ=255)
                                gAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                    >  1:1168972/1‑100 (MQ=255)
                                 aaaTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCGTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAg                                                                   >  2:1656080/1‑100 (MQ=255)
                                       aaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCg                                                             >  1:49912/1‑100 (MQ=255)
                                       aaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCg                                                             <  2:1611383/100‑1 (MQ=255)
                                          aGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGc                                                          <  2:1725277/100‑1 (MQ=255)
                                           gACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCt                                                         <  2:285359/100‑1 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTg                                                        <  1:2935842/99‑1 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                       <  1:2406424/100‑1 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                       >  1:1936697/1‑100 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                       >  2:974600/1‑100 (MQ=255)
                                              ggACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                      <  2:1223394/100‑1 (MQ=255)
                                              ggACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                      >  1:813496/1‑100 (MQ=255)
                                               gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                     >  1:2619676‑M1/1‑99 (MQ=255)
                                                 cAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtc                                                   >  2:1614908‑M1/1‑97 (MQ=255)
                                                   aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctg                                                 >  1:1445386‑M1/1‑95 (MQ=255)
                                                   aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctg                                                 >  1:884294‑M1/1‑95 (MQ=255)
                                                      tAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATg                                              <  1:684015/100‑1 (MQ=255)
                                                       ngTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGc                                             >  1:1059827/2‑100 (MQ=255)
                                                       aGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGc                                             >  1:3030834/1‑100 (MQ=255)
                                                        gTGGGTTGTCCGTCTTCATTAGTAGAATTTATGCAGTATGTAGGCCGGATAAGGCGTCCCCGCCGGATCCGGCACAGGCACCGTGCTGATgtctgat                                               <  2:712492‑M1/97‑8 (MQ=255)
                                                          gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGa                                           <  2:1951775/99‑1 (MQ=255)
                                                          gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGAc                                          >  1:2498917/1‑100 (MQ=255)
                                                               gTCCGTCTTCATTATAAGAATTTATGCACTATGAAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGCCACCGTGCTGATGTCTGATGCGACGCTgg                                     >  2:1873667/1‑100 (MQ=255)
                                                                tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                    <  2:49911/100‑1 (MQ=255)
                                                                tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                    >  1:1502528/1‑100 (MQ=255)
                                                                 ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                   >  2:902459/1‑100 (MQ=255)
                                                                 ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                   >  2:722308/1‑100 (MQ=255)
                                                                   gTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                 <  1:2591011/100‑1 (MQ=255)
                                                                    tCTTCATTATAAGAATTTATGCACGATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                 >  1:282423/1‑99 (MQ=255)
                                                                     cTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGTGCGTc                               >  2:2879775/1‑100 (MQ=255)
                                                                      ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                              <  2:3030805/100‑1 (MQ=255)
                                                                      ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                              <  1:2905283/100‑1 (MQ=255)
                                                                      ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                              >  2:1241362/1‑100 (MQ=255)
                                                                      ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                              <  1:2306603/100‑1 (MQ=255)
                                                                       tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                             >  2:2664358/1‑100 (MQ=255)
                                                                       tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                             >  2:1826311/1‑100 (MQ=255)
                                                                       tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                             >  2:302871/1‑100 (MQ=255)
                                                                        cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgacgcgccagcgtcgcatcaga                            <  1:2632012‑M1/100‑27 (MQ=255)
                                                                        cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                              >  2:1030937/1‑98 (MQ=255)
                                                                         aTTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTAT                           <  1:46475‑M2/100‑1 (MQ=255)
                                                                            ataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAG                        <  2:924131‑M2/100‑1 (MQ=255)
                                                                              aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAC                      <  1:2880809‑M2/100‑1 (MQ=255)
                                                                               aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                     >  2:2402629/1‑100 (MQ=255)
                                                                               aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                     <  2:376253/100‑1 (MQ=255)
                                                                               aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                     >  2:3085997/1‑100 (MQ=255)
                                                                                  aTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagacatca                  <  2:1603678‑M1/100‑37 (MQ=255)
                                                                                  aTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTAc                  <  1:2009278/100‑1 (MQ=255)
                                                                                  aTTTATGCACTATGTAGCCGGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTGATCAGACCTa                   <  2:408443/99‑1 (MQ=255)
                                                                                    ttATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaa                >  1:1046136/1‑100 (MQ=255)
                                                                                     tATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaa               >  2:2195078/1‑100 (MQ=255)
                                                                                      aTGCACTATGTAGGCCGGATAAGGCGTCCCCTCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagacatcagcac              <  2:2952056‑M1/100‑41 (MQ=255)
                                                                                       tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc             <  1:1099021/100‑1 (MQ=255)
                                                                                       tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc             <  1:2579670/100‑1 (MQ=255)
                                                                                       tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc             >  1:2242249/1‑100 (MQ=255)
                                                                                         naCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc           >  2:1522957/2‑100 (MQ=255)
                                                                                            tATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcc        <  1:381158‑M1/100‑47 (MQ=255)
                                                                                               gTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGc     <  1:1270247/100‑1 (MQ=255)
                                                                                                tAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCg    >  1:2657778/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa  <  1:923675/100‑1 (MQ=255)
                                                                                                  ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa  <  2:865687/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
ATATGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAA  >  NC_000913/900654‑900851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.