BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	900753 =	NA (NA)	3 (0.030)	3/164	NT	NA	noncoding (5/87 nt)	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	900783 =	NA (NA)	3 (0.030)	3/164	NT	NA	noncoding (35/87 nt)	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 125 total aligned reads displayed.

ATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCG  >  NC_000913/900684‑900881

ttcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGca                                                                                                    >  1:2001671‑M1/70‑100 (MQ=255)

  gAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                                                  >  1:1168972/1‑100 (MQ=255)

   aaaTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCGTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAg                                                                                                 >  2:1656080/1‑100 (MQ=255)

         aaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCg                                                                                           >  1:2909194/1‑100 (MQ=255)

         aaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCg                                                                                           <  2:1611383/100‑1 (MQ=255)

         aaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCg                                                                                           >  1:49912/1‑100 (MQ=255)

            aGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGc                                                                                        <  2:1725277/100‑1 (MQ=255)

            aGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGc                                                                                        >  1:2668199/1‑100 (MQ=255)

             gACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCt                                                                                       <  2:285359/100‑1 (MQ=255)

               cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTg                                                                                      <  1:2935842/99‑1 (MQ=255)

               cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                                                     >  2:974600/1‑100 (MQ=255)

               cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                                                     >  1:1936697/1‑100 (MQ=255)

               cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                                                     <  1:2406424/100‑1 (MQ=255)

                ggACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                                                    <  2:1223394/100‑1 (MQ=255)

                ggACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                                                    >  1:813496/1‑100 (MQ=255)

                 gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                                                   >  1:2619676‑M1/1‑99 (MQ=255)

                 gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                                                   <  1:842472‑M1/100‑2 (MQ=255)

                   cAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtc                                                                                 <  1:2489845‑M1/100‑4 (MQ=255)

                   cAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtc                                                                                 >  2:1614908‑M1/1‑97 (MQ=255)

                     aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctg                                                                               >  1:884294‑M1/1‑95 (MQ=255)

                     aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctg                                                                               >  1:1445386‑M1/1‑95 (MQ=255)

                       ttAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAAGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgat                                                                             >  1:376255‑M1/1‑93 (MQ=255)

                        tAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATg                                                                            <  1:684015/100‑1 (MQ=255)

                         ngTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGc                                                                           >  1:1059827/2‑100 (MQ=255)

                          gTGGGTTGTCCGTCTTCATTAGTAGAATTTATGCAGTATGTAGGCCGGATAAGGCGTCCCCGCCGGATCCGGCACAGGCACCGTGCTGATgtctgat                                                                             <  2:712492‑M1/97‑8 (MQ=255)

                            gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGa                                                                         <  2:1951775/99‑1 (MQ=255)

                            gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGAc                                                                        >  1:2498917/1‑100 (MQ=255)

                              gTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGc                                                                      >  2:3068221/1‑100 (MQ=255)

                              gTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGc                                                                      >  1:1511315/1‑100 (MQ=255)

                                 gTCCGTCTTCATTATAAGAATTTATGCACTATGAAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGCCACCGTGCTGATGTCTGATGCGACGCTgg                                                                   >  2:1873667/1‑100 (MQ=255)

                                  tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                                                  <  2:49911/100‑1 (MQ=255)

                                   ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                                                 <  2:1617380/100‑1 (MQ=255)

                                   ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                                                 >  2:902459/1‑100 (MQ=255)

                                   ccGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcg                                                                 >  2:722308/1‑100 (MQ=255)

                                     gTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                                               <  1:2591011/100‑1 (MQ=255)

                                      tCTTCATTATAAGAATTTATGCACGATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                                               >  1:282423/1‑99 (MQ=255)

                                        ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                                                            <  1:2905283/100‑1 (MQ=255)

                                        ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                                                            <  2:3030805/100‑1 (MQ=255)

                                        ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                                                            <  1:2306603/100‑1 (MQ=255)

                                        ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                                                            >  2:1241362/1‑100 (MQ=255)

                                        ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                                                            <  1:2606403/100‑1 (MQ=255)

                                         tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                                                           >  2:2664358/1‑100 (MQ=255)

                                         tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                                                           >  2:1826311/1‑100 (MQ=255)

                                          cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                                                            >  2:1030937/1‑98 (MQ=255)

                                           aTTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTAT                                                         <  1:47380‑M2/100‑1 (MQ=255)

                                            tattaAGAATGTATTCACTATGTAGGCCGAAGAAGGAGTCCCCGCCGCAGCCGGCACAGGCACCGAGCTGATGTCTGATGCGACGCTGGCGCGTCtt                                                           <  2:1936787/94‑1 (MQ=37)

                                              ataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAG                                                      <  2:924131‑M2/100‑1 (MQ=255)

                                              ataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAG                                                      <  2:923671‑M2/100‑1 (MQ=255)

                                               naagAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGA                                                     <  2:2996996‑M2/99‑1 (MQ=255)

                                                aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAC                                                    <  1:2880809‑M2/100‑1 (MQ=255)

                                                aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAC                                                    >  2:2689548‑M2/1‑100 (MQ=255)

                                                 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                   <  2:376253/100‑1 (MQ=255)

                                                 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                   >  2:3085997/1‑100 (MQ=255)

                                                 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                   >  2:2402629/1‑100 (MQ=255)

                                                 aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                   >  1:3020924/1‑100 (MQ=255)

                                                   aaTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagacatc                                                 <  1:436830‑M1/100‑36 (MQ=255)

                                                    aTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagacatca                                                <  2:1603678‑M1/100‑37 (MQ=255)

                                                    aTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTAc                                                <  1:2009278/100‑1 (MQ=255)

                                                    aTTTATGCACTATGTAGCCGGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTGATCAGACCTa                                                 <  2:408443/99‑1 (MQ=255)

                                                     tttATTAACTATGTAGGCCGGATAAGGCCTCCCCGCCGCATCCCCCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagatttta                                                <  2:727862‑M1/99‑37 (MQ=255)

                                                      ttATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaa                                              >  1:1046136/1‑100 (MQ=255)

                                                      ttATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACa                                               <  2:2274517/99‑1 (MQ=255)

                                                       tATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACaaa                                             >  2:2195078/1‑100 (MQ=255)

                                                        aTGCACTATGTAGGCCGGATAAGGCGTCCCCTCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagacatcagcac                                            <  2:2952056‑M1/100‑41 (MQ=255)

                                                         tgccgtATGTAGGCCGGATAAGGCGTCCCCGCCGCCTCCGGCACAGTCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                           <  2:1072909/95‑1 (MQ=37)

                                                         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                           <  1:2579670/100‑1 (MQ=255)

                                                         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                           >  1:2242249/1‑100 (MQ=255)

                                                         tGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                           <  1:1099021/100‑1 (MQ=255)

                                                           naCTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                         >  2:1522957/2‑100 (MQ=255)

                                                              tATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATgtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcc                                      <  1:381158‑M1/100‑47 (MQ=255)

                                                                 gTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGc                                   <  1:1270247/100‑1 (MQ=255)

                                                                  tAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCg                                  >  1:2657778/1‑100 (MQ=255)

                                                                   gtgccggatgcggcggggacgccttatccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGa                                 >  1:1233399‑M2/33‑100 (MQ=255)

                                                                    ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                <  1:1409260/100‑1 (MQ=255)

                                                                    ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                <  1:923675/100‑1 (MQ=255)

                                                                     gccggatgcggcggggacgccttatccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGACGAAt                               >  1:378925‑M2/31‑100 (MQ=255)

                                                                      CCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                              >  2:49989‑M1/1‑100 (MQ=255)

                                                                      CCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                              <  2:404504‑M1/100‑1 (MQ=255)

                                                                       CGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGt                             <  2:441263‑M1/100‑1 (MQ=255)

                                                                          aTAAGGCGTCCCCGCCGCATCCGGCACAGGAACAGTGTTGATGTCTGATGCGACGCTGGTGCGTCTTCTCAGTCTTACAACACCCCCCGGCGAATGTACg                          <  2:1812629/100‑1 (MQ=37)

                                                                          ATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACg                          <  2:1048592‑M1/100‑1 (MQ=255)

                                                                          ATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACg                          >  2:1892399‑M1/1‑100 (MQ=255)

                                                                            aaGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCa                        <  2:1251481/100‑1 (MQ=255)

                                                                            aaGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCa                        <  2:1316998/100‑1 (MQ=255)

                                                                             aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAg                       <  1:581885/100‑1 (MQ=255)

                                                                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCca                    <  2:2902474/100‑1 (MQ=255)

                                                                                cGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCca                    >  1:2027877/1‑100 (MQ=255)

                                                                                   ccccGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAt                 >  1:171350/1‑100 (MQ=255)

                                                                                   ccacgccgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAt                 >  2:458386/4‑100 (MQ=255)

                                                                                    agcgtcgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTGTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAtt                >  2:3054068/6‑100 (MQ=255)

                                                                                           cATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg         <  2:1706045/100‑1 (MQ=255)

                                                                                           cATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg         <  2:834446/100‑1 (MQ=255)

                                                                                           cATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg         <  2:526437/100‑1 (MQ=255)

                                                                                           cATCCGGCACAGGCACCGTGCTGATGTCTGACGCGACACTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg         <  2:2102437/100‑1 (MQ=255)

                                                                                            atccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCg         <  2:1529353‑M2/92‑1 (MQ=255)

                                                                                             tccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGcc       <  2:2909165‑M2/94‑1 (MQ=255)

                                                                                              ccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCg      >  2:1275556‑M2/6‑100 (MQ=255)

                                                                                               cggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGt     >  1:221101‑M2/5‑100 (MQ=255)

                                                                                                  cACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg  <  2:2668171‑M2/99‑1 (MQ=255)

                                                                                                  cACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg  <  2:1547157‑M2/99‑1 (MQ=255)

ATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCG  >  NC_000913/900684‑900881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.