New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2835118NA (NA)16 (0.160) 9/164 NT NA noncoding (52/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2835148 NA (NA)noncoding (82/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 138 total aligned reads displayed.

ATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAT  >  NC_000913/2835021‑2835217
                                                                                                 |                                                                                                   
aTTGTTGAAAACAGTGCCGATGTAGGTGGGCTACTGTGTCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgc                                                                                                   >  2:1919082‑M1/1‑98 (MQ=255)
 ttgttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgcc                                                                                                  <  2:166259‑M1/100‑4 (MQ=255)
 ttgttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgcc                                                                                                  <  2:226122‑M1/100‑4 (MQ=255)
   gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                                                <  1:787118‑M1/100‑6 (MQ=255)
   gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                                                >  1:1675188‑M1/1‑95 (MQ=255)
   gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                                                <  2:2525128‑M1/100‑6 (MQ=255)
    ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgga                                                                                               <  1:1917874‑M1/100‑7 (MQ=255)
    ttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgga                                                                                               >  1:2417509‑M1/1‑94 (MQ=255)
      gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                                             <  1:1675121/100‑1 (MQ=255)
      gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                                             <  1:284876/100‑1 (MQ=255)
        aaaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAg                                                                                           <  1:1834879/100‑1 (MQ=255)
        aaaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAg                                                                                           <  1:822470/100‑1 (MQ=255)
         accATTGCCGAGGTACGTGGGCGACTGTGCCTAAAATGTCGTATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAg                                                                                           <  1:2813825/97‑1 (MQ=25)
         aaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAgg                                                                                          <  2:2259687/100‑1 (MQ=255)
           cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                                        <  1:2417518/100‑1 (MQ=255)
           cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGCGCGGATAAGGCg                                                                                        >  2:1598188/1‑100 (MQ=255)
            aTTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGt                                                                                       <  1:2218717/100‑1 (MQ=255)
             ttGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGtt                                                                                      <  1:1975815/100‑1 (MQ=255)
             ttGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGtt                                                                                      >  1:2533157/1‑100 (MQ=255)
             ttGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGt                                                                                       <  1:59162/99‑1 (MQ=255)
             ttGCCGATGTAGGTGGCCTCCTGTGCCTAAAATGTCGGATGCCACGCTGGCGCGTCTTCTCCGACGTACGGGGACACATGTGTCGCCCGGATCAgcc                                                                                         >  2:3012970/1‑95 (MQ=255)
              tGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGttt                                                                                     <  1:802077/100‑1 (MQ=255)
              ngCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCATCTTATCCGACCTACAGGGACGCAGGTGTAGGCCGGATAAGGCGttt                                                                                     >  2:2100160/2‑100 (MQ=255)
                ccGATGTAGGTGGGCTACTGTGGCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCCATGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAc                                                                                   >  2:2611688/1‑100 (MQ=255)
                ccGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGtaaac                                                                                   <  2:2176827/100‑5 (MQ=255)
                ccGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTAGCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAc                                                                                   <  2:888529/100‑1 (MQ=255)
                  gATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgc                                                                                 <  1:2870724/100‑1 (MQ=255)
                   aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgcc                                                                                <  2:459820‑M1/100‑22 (MQ=255)
                   aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                                                <  1:2361612/100‑1 (MQ=255)
                      tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTACGCCGGATAAGGCGTTTAcgccg                                                                               >  2:794651/1‑98 (MQ=255)
                        ggTGGGCTACTGTGCCTAAAATGGCAGATGCGACGCTGGCGCGTCGTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatc                                                                           <  2:2646570‑M1/100‑27 (MQ=255)
                         gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatcc                                                                          <  1:2232905‑M1/100‑28 (MQ=255)
                          tGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCG                                                                         >  1:203634‑M2/1‑100 (MQ=255)
                           gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGG                                                                        >  2:736912‑M2/1‑100 (MQ=255)
                            ggCTAGTTTGCCTAAACTGTCTGATGCGACGCTGGCGCGTCGGATCCGACCTACGGGGACGAATGTGTAGgccggatgcggcgtaaacgccttatccgg                                                                        <  2:1682553‑M1/99‑30 (MQ=255)
                            ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcc                                                                      <  2:1017273‑M1/100‑32 (MQ=255)
                             gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGGCCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcc                                                                      <  2:1182559‑M1/100‑32 (MQ=255)
                             gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcc                                                                      <  2:1230933‑M1/100‑32 (MQ=255)
                             gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcc                                                                      <  2:1112521‑M1/100‑32 (MQ=255)
                             gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCc                                                                      >  2:859757‑M2/1‑99 (MQ=255)
                             gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                      >  1:2263791/1‑100 (MQ=255)
                             gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                      >  2:2986882/1‑100 (MQ=255)
                             gCTACTGTGCCTAAAATCTCGGATGCGACGCTTGCGCGTCTTATCCGACCTACGCGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcc                                                                      <  2:1643619‑M1/100‑32 (MQ=255)
                               tACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggccta                                                                    <  2:2839232‑M1/100‑34 (MQ=255)
                                aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcctac                                                                   <  2:999579‑M1/100‑35 (MQ=255)
                                aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                                   <  1:2349317/100‑1 (MQ=255)
                                aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                                   <  1:58520/100‑1 (MQ=255)
                                   gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                                                <  2:1155446/100‑1 (MQ=255)
                                       cgaaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGAGCTTCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                                             <  2:2190154/97‑1 (MQ=255)
                                       cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                                            >  2:2122649/1‑100 (MQ=255)
                                       cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                                            >  2:1846529/1‑100 (MQ=255)
                                        tAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa                                                           >  2:2904401/1‑100 (MQ=255)
                                           aaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                                        <  1:2582623/100‑1 (MQ=255)
                                                cGGATGGGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                                      <  2:2404736/97‑1 (MQ=255)
                                                 ggATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagg                                                  <  1:2618503‑M1/100‑52 (MQ=255)
                                                    tGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtt                                               <  2:1568873/100‑1 (MQ=255)
                                                    tGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtt                                               <  2:1946551/100‑1 (MQ=255)
                                                    tGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtt                                               >  1:522111/1‑100 (MQ=255)
                                                     gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                                              <  1:198448/100‑1 (MQ=255)
                                                        aCGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                           <  2:2866958/100‑1 (MQ=255)
                                                        aCGCTGGCGCGTCTTAGCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                           <  1:2595188/100‑1 (MQ=255)
                                                         cgtcttccgatCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                                          <  2:1760652/90‑1 (MQ=255)
                                                         cGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                                          <  1:1243318/100‑1 (MQ=255)
                                                          gCTGGCGCGTCTTATCCGACCTGCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                                          <  2:2920638/99‑1 (MQ=255)
                                                          gCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                                         <  1:262284/100‑1 (MQ=255)
                                                           cTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                                        >  2:2948253/1‑100 (MQ=255)
                                                           cTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                                        >  1:1076390/1‑100 (MQ=255)
                                                             ggCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGtt                                      >  1:3094252/1‑100 (MQ=255)
                                                             ggCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGtt                                      <  2:1761195/100‑1 (MQ=255)
                                                             ggCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTGTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGt                                       >  1:735345/1‑99 (MQ=255)
                                                                gcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                                   <  2:1245403/100‑1 (MQ=255)
                                                                  gTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGa                                 >  2:1552708/1‑100 (MQ=255)
                                                                  gTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGa                                 >  2:411480/1‑100 (MQ=255)
                                                                   tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc                                <  1:64032/100‑1 (MQ=255)
                                                                   tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc                                <  2:2200927/100‑1 (MQ=255)
                                                                      tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc                             <  1:2145090/100‑1 (MQ=255)
                                                                       aTCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCa                            >  1:2787638/1‑100 (MQ=255)
                                                                         ccGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAcc                          >  1:1100013/1‑100 (MQ=255)
                                                                             ccTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatcc                      <  1:2618503‑M2/100‑50 (MQ=255)
                                                                             ccTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatcc                      <  1:2618908‑M2/100‑50 (MQ=255)
                                                                             ccTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCt                      >  1:950972/1‑100 (MQ=255)
                                                                              cTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTa                     <  2:1675174/100‑1 (MQ=255)
                                                                                aCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAc                   >  1:2383113/1‑100 (MQ=255)
                                                                                 cGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAcc                  >  2:2108581/1‑100 (MQ=255)
                                                                                    ggACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAAc               <  1:1693278/100‑1 (MQ=255)
                                                                                         cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgcc          >  2:2351221/1‑100 (MQ=255)
                                                                                         cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgcc          >  2:65811/1‑100 (MQ=255)
                                                                                           tgtgTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgccgc        >  1:188727/1‑100 (MQ=255)
                                                                                            gtgtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgca       <  1:1742740/100‑1 (MQ=255)
                                                                                             tgtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcag      >  1:953237/1‑100 (MQ=255)
                                                                                             tgtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcag      >  2:91728/1‑100 (MQ=255)
                                                                                              gtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagc     <  1:185674/100‑1 (MQ=255)
                                                                                              gtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagc     <  1:2262080/100‑1 (MQ=255)
                                                                                               tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagta    <  2:2839232‑M2/100‑68 (MQ=255)
                                                                                                aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCaa   >  1:3101991/1‑100 (MQ=255)
                                                                                                 ggccggataaggcgtttacgccgcatccggcctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagc  >  2:859757‑M1/1‑1 (MQ=255)
                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccgcgtaggtcggataagacgcgcaagcgtcgcatccgagattttaggcacagtagc  <  2:1643619‑M2/100‑70 (MQ=255)
                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagc  <  2:1230933‑M2/100‑70 (MQ=255)
                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagc  <  2:1112521‑M2/100‑70 (MQ=255)
                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggccggataagacgcgccagcgtcgcatccgacattttaggcacagtagc  <  2:1182559‑M2/100‑70 (MQ=255)
                                                                                                 |                                                                                                   
ATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAT  >  NC_000913/2835021‑2835217

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.