New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2835118NA (NA)16 (0.160) 9/164 NT NA noncoding (52/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2835148 NA (NA)noncoding (82/82 nt) REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 132 total aligned reads displayed.

GCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGCCATC  >  NC_000913/2835050‑2835247
                                                                                                  |                                                                                                   
gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCc                                                                                                    >  2:859757‑M2/1‑99 (MQ=255)
gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                                                    >  2:2986882/1‑100 (MQ=255)
   aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                                                                 <  1:2349317/100‑1 (MQ=255)
   aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                                                                 <  1:58520/100‑1 (MQ=255)
    cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATgg                                                                                                <  2:2198036/100‑1 (MQ=255)
      gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                                                                              <  2:1155446/100‑1 (MQ=255)
      gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                                                                              <  2:158350/100‑1 (MQ=255)
          cgaaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGAGCTTCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                                                                           <  2:2190154/97‑1 (MQ=255)
          cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                                                                          >  2:1846529/1‑100 (MQ=255)
          cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                                                                          >  1:2993171/1‑100 (MQ=255)
          cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                                                                          >  2:2122649/1‑100 (MQ=255)
           tAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa                                                                                         >  1:425490/1‑100 (MQ=255)
           tAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa                                                                                         >  2:2904401/1‑100 (MQ=255)
                tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                                                                    <  1:1961100/100‑1 (MQ=255)
                   cGGATGGGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                                                                    <  2:2404736/97‑1 (MQ=255)
                       tGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtt                                                                             <  2:1568873/100‑1 (MQ=255)
                        gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                                                                            <  1:198448/100‑1 (MQ=255)
                        gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                                                                            <  1:1292562/100‑1 (MQ=255)
                           aCGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                                                         <  2:2866958/100‑1 (MQ=255)
                           aCGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGAGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                                                         >  2:1655762/1‑100 (MQ=255)
                           aCGCTGGCGCGTCTTAGCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                                                                         <  1:2595188/100‑1 (MQ=255)
                            cgtcttccgatCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                                                                        <  2:1760652/90‑1 (MQ=255)
                            cGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                                                                        <  1:1243318/100‑1 (MQ=255)
                             gCTGGCGCGTCTTATCCGACCTGCGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                                                                        <  2:2920638/99‑1 (MQ=255)
                             gCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                                                                       <  1:262284/100‑1 (MQ=255)
                              cTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                                                                      >  1:1076390/1‑100 (MQ=255)
                                ggCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGtt                                                                    >  2:293051/1‑100 (MQ=255)
                                   gcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                                                                 <  2:1245403/100‑1 (MQ=255)
                                      tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc                                                              <  2:2200927/100‑1 (MQ=255)
                                      tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc                                                              <  1:64032/100‑1 (MQ=255)
                                        ttATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACtt                                                            >  1:597241/1‑100 (MQ=255)
                                         tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc                                                           <  1:2145090/100‑1 (MQ=255)
                                         tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc                                                           >  2:899784/1‑100 (MQ=255)
                                            ccGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAcc                                                        >  1:1100013/1‑100 (MQ=255)
                                             cGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAccc                                                       >  1:1843906/1‑100 (MQ=255)
                                             cGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAccc                                                       >  2:2347188/1‑100 (MQ=255)
                                                ccTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatcc                                                    <  1:2618908‑M2/100‑50 (MQ=255)
                                                ccTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCt                                                    >  1:950972/1‑100 (MQ=255)
                                                 cTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTa                                                   <  2:1675174/100‑1 (MQ=255)
                                                    cGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAAcc                                                >  2:2108581/1‑100 (MQ=255)
                                                       ggACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAAc                                             <  1:1693278/100‑1 (MQ=255)
                                                       ggACGCATGTGTAGGCCGGATAAGGCGTGTACGCCGCATCCGGCAATGGTGGCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAGCCAAc                                             <  1:794653/100‑1 (MQ=255)
                                                            cATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgcc                                        >  2:65811/1‑100 (MQ=255)
                                                              tgtgTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGcgccgc                                      >  1:188727/1‑100 (MQ=255)
                                                               gtgtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgca                                     <  1:1742740/100‑1 (MQ=255)
                                                                tgtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcag                                    >  2:91728/1‑100 (MQ=255)
                                                                 gtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagc                                   >  2:1842511/1‑100 (MQ=255)
                                                                 gtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagc                                   <  1:2262080/100‑1 (MQ=255)
                                                                 gtAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagc                                   <  1:185674/100‑1 (MQ=255)
                                                                  tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagta                                  <  2:2839232‑M2/100‑68 (MQ=255)
                                                                  tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagca                                  <  1:2329840/100‑1 (MQ=255)
                                                                  tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCAGTTCTGGACTTCACCCGCTAACCAACGCGCCgcagca                                  >  2:2091220/1‑100 (MQ=255)
                                                                   aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCaa                                 >  1:2617092/1‑100 (MQ=255)
                                                                   aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCaa                                 >  1:3101991/1‑100 (MQ=255)
                                                                    ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccgcgtaggtcggataagacgcgcaagcgtcgcatccgagattttaggcacagtagc                                <  2:1643619‑M2/100‑70 (MQ=255)
                                                                    ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagc                                <  2:1230933‑M2/100‑70 (MQ=255)
                                                                    ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagc                                <  2:1112521‑M2/100‑70 (MQ=255)
                                                                    ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataaacgcgccagcgtcgcatccgacattttaggcacagtagcc                                <  2:1017273‑M2/100‑70 (MQ=255)
                                                                    ggCCGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggccggataagacgcgccagcgtcgcatccgacattttaggcacagtagc                                <  2:1182559‑M2/100‑70 (MQ=255)
                                                                    ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAAGGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAAt                                <  2:3092866/100‑1 (MQ=255)
                                                                      ccGGATAAGGCGTTTACGCCGCATCCGGCctacacattcgtccccgtaggtcggatccgacgcgccagcgtcgcatcagacagtttaggcaaactagcc                               <  2:1682553‑M2/99‑71 (MQ=255)
                                                                      ccGGATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagccc                              <  1:2489889‑M2/100‑72 (MQ=255)
                                                                       cGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAAc                             >  2:120258/1‑100 (MQ=255)
                                                                       cGGAGAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATaa                              <  1:2734020/99‑1 (MQ=255)
                                                                        ggATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccac                            <  1:2232905‑M2/100‑74 (MQ=255)
                                                                        ggATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAAcc                            >  2:2496161/1‑100 (MQ=255)
                                                                        ggATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAAcc                            >  2:71618/1‑100 (MQ=255)
                                                                         gATAAGGCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggatacgacgcgccagcgtcgcatctgccattttaggcacagtagcccacc                           <  2:2646570‑M2/100‑75 (MQ=255)
                                                                         gATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAAccc                           <  1:2948282/100‑1 (MQ=255)
                                                                           tAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAAccccc                         <  1:2773816/100‑1 (MQ=255)
                                                                             aGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACACGCTAACCAACGCGCCGCAGCAATAACCCCCTg                       >  2:1294692/1‑100 (MQ=255)
                                                                              ggCGTTTACGCCGCATCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacat                      <  2:459820‑M2/100‑80 (MQ=255)
                                                                              ggCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGc                      >  1:743273/1‑100 (MQ=255)
                                                                              ggCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGc                      >  2:147739/1‑100 (MQ=255)
                                                                                  tttACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCa                  <  1:395952/100‑1 (MQ=255)
                                                                                     aCGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCagag               >  2:547441/1‑100 (MQ=255)
                                                                                     aCGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCagag               >  1:938905/1‑100 (MQ=255)
                                                                                      cgccgcATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAgaga              >  2:408079/1‑100 (MQ=255)
                                                                                      cgccgcATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAgaga              >  1:2316570/1‑100 (MQ=255)
                                                                                      cgccgcATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAgaga              >  2:792313/1‑100 (MQ=255)
                                                                                      cgccgcATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAgaga              >  1:2807407/1‑100 (MQ=255)
                                                                                       gccgcATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGAc             <  2:2470853/100‑1 (MQ=255)
                                                                                       gccgcATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGAc             <  1:2501855/100‑1 (MQ=255)
                                                                                         cgcATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACaa           >  2:1610155/1‑100 (MQ=255)
                                                                                            aTCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAAcc        <  2:2836652/100‑1 (MQ=255)
                                                                                             tCCGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaa       >  1:2417509‑M2/1‑6 (MQ=255)
                                                                                             tCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCg       >  2:1643242/1‑100 (MQ=255)
                                                                                              ccGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaac      <  2:2525000‑M2/100‑96 (MQ=255)
                                                                                              ccGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaac      <  1:787118‑M2/100‑96 (MQ=255)
                                                                                              ccGGCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaac      >  1:1675188‑M2/1‑5 (MQ=255)
                                                                                              ccGGCctacacatgcgcccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaac      >  2:2664418‑M2/1‑5 (MQ=255)
                                                                                               cGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGcc     <  2:2570983/100‑1 (MQ=255)
                                                                                               cGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGcc     <  1:1919098/100‑1 (MQ=255)
                                                                                               cGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGc      >  1:259282/1‑99 (MQ=255)
                                                                                                ggCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttaggcacagtagcccacctacatcggcaatgttttcaacaa    <  2:226122‑M2/100‑98 (MQ=255)
                                                                                                ggCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGCCa    <  2:2293243/100‑1 (MQ=255)
                                                                                                ggCAAGGGTGTCCAAATGCAACACGTTTTACCCGTACCGTACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAGCCGCCa    <  2:738469/100‑1 (MQ=255)
                                                                                                 gCctacacatgcgtccccgtaggtcggataagacgcgccagcgtcgcatccgacattttagacacagtagcccacctacatcggcactgttttcaacaat   >  2:1919082‑M2/1‑2 (MQ=255)
                                                                                                  cAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGCCATc  >  1:924919/1‑100 (MQ=255)
                                                                                                  cAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGCCATc  >  2:1066305/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
GCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTAACCAACGCGCCGCAGCAATAACCCCCTGCCCCAGAGACAAACCGCCATC  >  NC_000913/2835050‑2835247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.