New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4554509 =NA (NA)5 (0.050) 4/164 NT NA noncoding (5/34 nt) REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4554539 = NA (NA)intergenic (+178/‑37) uxuB/uxuR D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor

Only 100 of 150 total aligned reads displayed.

TACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGATCT  >  NC_000913/4554440‑4554637
                                                                                                   |                                                                                                  
taaggtctttgcgcagaggtggcagatttcatggtgttgtgtccgttaggtgcggttaatcaaatttttGCCGGATAAGGCGTTCACGCCGCATCCGGCa                                                                                                    >  1:2026304‑M1/70‑100 (MQ=255)
taaggtctttgcgcagaggtggcagatttcatggtgttgtgtccgttaggtgcggttaatcaaatttttGCCGGATAAGGCGTTCACGCCGCATCCGGCa                                                                                                    >  1:888623‑M1/70‑100 (MQ=255)
 aCGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa                                                                                                   >  2:2144193/1‑100 (MQ=255)
 aCGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa                                                                                                   >  1:2512762/1‑100 (MQ=255)
     gCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAAt                                                                                               <  1:201074/100‑1 (MQ=255)
      ccAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCCTTCACGCCGCATCCGGCAAAAAtt                                                                                              >  2:1525942/1‑100 (MQ=255)
       tttgcgcagaggtggcagatttcatggtgttgtgtccgttaggtgcggttaatcaaatttttGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAAttt                                                                                             >  1:2509861‑M1/63‑100 (MQ=255)
       cAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAAttt                                                                                             <  1:946146/100‑1 (MQ=255)
       cAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAAttt                                                                                             <  2:2387249/100‑1 (MQ=255)
       cAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAAttt                                                                                             >  1:1646276/1‑100 (MQ=255)
       cAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCAGTTGTAGGCAGGATAAGGCGTTCACGCCGCATCAGGCaaaaa                                                                                                >  2:799367/1‑97 (MQ=255)
        aaCTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTg                                                                                            <  1:2754037/100‑1 (MQ=255)
        aaCTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTg                                                                                            <  1:716883/100‑1 (MQ=255)
          cTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGAt                                                                                          >  2:1588901/1‑100 (MQ=255)
           ttCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGAtt                                                                                         <  1:793557/100‑1 (MQ=255)
            tCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTa                                                                                        >  1:2706965/1‑100 (MQ=255)
              cAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAAc                                                                                      >  2:2532379/1‑100 (MQ=255)
               aGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAAcc                                                                                     <  2:1359424/100‑1 (MQ=255)
               aGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAAcc                                                                                     >  1:1303969/1‑100 (MQ=255)
                gTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAAcc                                                                                     <  1:1065037/99‑1 (MQ=255)
                gTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCg                                                                                    >  2:123589/1‑100 (MQ=255)
                gTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCg                                                                                    <  2:1046893/100‑1 (MQ=255)
                 tGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGc                                                                                   <  1:802218/100‑1 (MQ=255)
                        ggTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAAc                                                                            >  1:1428624/1‑100 (MQ=255)
                        ggTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAAc                                                                            >  1:2515343/1‑100 (MQ=255)
                         gTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACg                                                                           >  2:509417/1‑100 (MQ=255)
                         gTATAGATTTAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATGAGGCGTTCACGCAGCATCCGGCAAAAATTTGATTAACGGCACCTAACg                                                                           >  2:574216/1‑100 (MQ=38)
                          tgtaGTTTGAAATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACgg                                                                          <  1:1607070/98‑1 (MQ=255)
                          tataGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACgg                                                                          >  1:3077355/1‑100 (MQ=255)
                            taGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGac                                                                        <  1:1115003/100‑1 (MQ=255)
                            taGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGac                                                                        <  1:772541/100‑1 (MQ=255)
                            taGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGac                                                                        <  1:3014334/100‑1 (MQ=255)
                            taGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGac                                                                        <  1:2186832/100‑1 (MQ=255)
                             aGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGaca                                                                       <  1:285804/100‑1 (MQ=255)
                              gTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGacac                                                                      >  1:1146060/1‑100 (MQ=255)
                               tttGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGAcaca                                                                     <  1:3017468/100‑1 (MQ=255)
                               tttGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGAcaca                                                                     >  1:365682/1‑100 (MQ=255)
                               tttGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGAcaca                                                                     >  1:1340754/1‑100 (MQ=255)
                               tttGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGAcaca                                                                     <  2:2316754/100‑1 (MQ=255)
                                ttGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGAcaca                                                                     <  2:2465447/99‑1 (MQ=255)
                                      ttAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCAt                                                              <  2:799649/100‑1 (MQ=255)
                                      ttAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCAt                                                              <  1:558370/100‑1 (MQ=255)
                                        aaCGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGa                                                            >  1:1283387/1‑100 (MQ=255)
                                        aaCGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGa                                                            >  1:1256519/1‑100 (MQ=255)
                                         aCGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGaa                                                           <  2:2609749/100‑1 (MQ=255)
                                          cGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGaaa                                                          >  1:1964130/1‑100 (MQ=255)
                                           gggggCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAAt                                                         <  1:1029241/100‑1 (MQ=255)
                                              ggCCGTAAAATTGCCCGTTGTAGTCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTGACGGACACAACACCATGAAATCTg                                                      <  2:1523924/100‑1 (MQ=255)
                                              ggCCGTAAAATTGCCCGTTGTAGGCCTGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATAAACCGCACCTAACGGACACAACACCATGAAATCTg                                                      <  2:1042593/100‑1 (MQ=255)
                                              ggCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCtn                                                      <  1:2996917/100‑2 (MQ=255)
                                              ggCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTg                                                      <  2:76707/100‑1 (MQ=255)
                                              ggCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTg                                                      <  2:186583/100‑1 (MQ=255)
                                                 cGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCa                                                   <  1:337962/100‑1 (MQ=255)
                                                  gTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCAc                                                  >  2:1472765/1‑100 (MQ=255)
                                                  gTAAAATTGCCCGATGTAGGCCGGATAAGGCCTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCAc                                                  >  1:2091471/1‑100 (MQ=255)
                                                      aaTTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACctct                                              <  2:2924146/100‑1 (MQ=255)
                                                       aTTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTg                                             >  1:742050/1‑100 (MQ=255)
                                                         tGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTgcg                                           <  2:585838/100‑1 (MQ=255)
                                                         tGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTgcg                                           >  1:2770576/1‑100 (MQ=255)
                                                         tGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTgcg                                           >  2:1549226/1‑100 (MQ=255)
                                                          gCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTgcgc                                          >  2:2198685/1‑100 (MQ=255)
                                                            ccGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCaa                                        >  1:15403/1‑100 (MQ=255)
                                                            ccGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCaa                                        <  2:1715972/100‑1 (MQ=255)
                                                             cGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCaaa                                       >  1:840309/1‑100 (MQ=255)
                                                             cGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCaaa                                       >  1:562021/1‑100 (MQ=255)
                                                               ttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGa                                     <  2:151125/100‑1 (MQ=255)
                                                               ttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGa                                     <  1:475438/100‑1 (MQ=255)
                                                                 ttttgccggatgcggcgtgaacgccttatccggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGAcc                                   >  2:2759240‑M2/35‑100 (MQ=255)
                                                                 gTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGAcc                                   <  2:2035684/100‑1 (MQ=255)
                                                                   aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCtt                                 >  1:933313/1‑100 (MQ=255)
                                                                   aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCtt                                 >  2:1803266/1‑100 (MQ=255)
                                                                    ggCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTa                                <  2:2532124/100‑1 (MQ=255)
                                                                    ggCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTa                                >  1:1539103/1‑100 (MQ=255)
                                                                    ggCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTa                                >  1:2013513/1‑100 (MQ=255)
                                                                    ggCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTa                                >  2:28378/1‑100 (MQ=255)
                                                                     gccggatgcggcgtgaacgccttatccggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTAc                               >  1:305333‑M2/31‑100 (MQ=255)
                                                                      CCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTAcc                              <  1:832952‑M1/100‑1 (MQ=255)
                                                                        GGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAg                            <  2:483996‑M1/100‑1 (MQ=255)
                                                                             aGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGt                       >  1:546191/1‑100 (MQ=255)
                                                                             aGGCGTTCACGCCGCATACGGCAAACAGATGATTAACCCCACGTGACGGGCACGAGACTATAGAGTCTTACACCTCTGCGGAAAGAGCTTAACaagaag                        >  2:631633/1‑99 (MQ=255)
                                                                                cGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCgg                    >  1:409673/1‑100 (MQ=255)
                                                                                cGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCgg                    <  1:338331/100‑1 (MQ=255)
                                                                                 gTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCggg                   >  1:2685411/1‑100 (MQ=255)
                                                                                 gTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCggg                   >  1:2453005/1‑100 (MQ=255)
                                                                                  ttCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCgggg                  <  2:1680990/100‑1 (MQ=255)
                                                                                   tcagctcgcATCCGTCAAAAATTTGATTAACCGCGCTTAACGGACACAACACCATGAAATCTGCCACCTCTACTCAACGACCTTACCAGGAAGTCGGGGc                 <  2:292615/94‑1 (MQ=255)
                                                                                   tCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGc                 >  2:3018160/1‑100 (MQ=255)
                                                                                   tCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGc                 >  1:2386176/1‑100 (MQ=255)
                                                                                     aCGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGAACTTACCAGGAAGTCGGGGCga               >  1:2907809/1‑100 (MQ=255)
                                                                                      cgccgcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCgat              >  1:2838392/1‑100 (MQ=255)
                                                                                      cgccgcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCgat              >  1:1174483/1‑100 (MQ=255)
                                                                                        ccgcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCgatga            >  2:2723877/1‑100 (MQ=255)
                                                                                        ccgcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCgatga            >  2:334448/1‑100 (MQ=255)
                                                                                        ccgcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCgatga            >  1:146003/1‑100 (MQ=255)
                                                                                              ccggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCcgcg      <  2:1228233‑M2/95‑1 (MQ=255)
                                                                                               cggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGa     >  1:2026757‑M2/5‑100 (MQ=255)
                                                                                               cggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGa     >  2:1351419‑M2/5‑100 (MQ=255)
                                                                                                ggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCGCCTCTGCGCAAAGACCTTACCAGGAAGTCGAGGCGATGATCCGCGAt    >  1:1030382‑M2/4‑100 (MQ=255)
                                                                                                ggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGAt    >  2:627934‑M2/4‑100 (MQ=255)
                                                                                                 gcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGATc   <  2:742048‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                  
TACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGATCT  >  NC_000913/4554440‑4554637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.