BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1939099 =	NA (NA)	8 (0.080)	8/162	NT	NA	noncoding (1/30 nt)	REP137 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP137 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	1939129 =	NA (NA)	8 (0.080)	8/162	NT	NA	intergenic (+38/+93)	pykA/lpxM	pyruvate kinase II/myristoyl‑acyl carrier protein (ACP)‑dependent acyltransferase

Only 100 of 154 total aligned reads displayed.

GGCGACGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCTTTTTTATTTG  >  NC_000913/1939032‑1939228

ggCGACGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTa                                                                                                   >  2:1579896/1‑100 (MQ=255)

ggCGACGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTa                                                                                                   >  1:2871406/1‑100 (MQ=255)

 gCGACGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTAc                                                                                                  <  1:3020296/100‑1 (MQ=255)

   gACGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATTCGGCGAAAACGCCACATCCGGCCTACAg                                                                                                <  1:2610/100‑1 (MQ=255)

    tgatgataagttcaagtttgcttcagaatattcgaaatctgttgaactatcattgaactgtaggccggatgcggcgaaaacgccacatccggcCTACAGt                                                                                               <  1:245286‑M2/7‑1 (MQ=255)

    tccgatctaGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGt                                                                                               <  2:619278/92‑1 (MQ=255)

    aCGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGt                                                                                               >  1:648936/1‑100 (MQ=255)

      gTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTc                                                                                             <  1:489027/100‑1 (MQ=255)

      gTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTc                                                                                             <  1:2013095/100‑1 (MQ=255)

      gTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTc                                                                                             <  2:1640497/100‑1 (MQ=255)

        gatgaGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCaa                                                                                           >  1:1455459/1‑100 (MQ=255)

        gatgaGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCaa                                                                                           >  1:791283/1‑100 (MQ=255)

         atgaGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAAt                                                                                          <  1:534354/100‑1 (MQ=255)

          tgaGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATg                                                                                         >  2:1839568/1‑100 (MQ=255)

          tgaGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATg                                                                                         >  1:856557/1‑100 (MQ=255)

           gaGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGa                                                                                        >  2:660608/1‑100 (MQ=255)

           gaGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGa                                                                                        >  1:1076346/1‑100 (MQ=255)

            aGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGtagatcgga                                                                                       >  1:619279/1‑92 (MQ=255)

             gTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATa                                                                                      <  2:1018274/100‑1 (MQ=255)

              tACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAg                                                                                     <  2:1753677/100‑1 (MQ=255)

               aCCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAAtagatcg                                                                                    >  1:591732/1‑94 (MQ=255)

               aCCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGt                                                                                    >  2:61018/1‑100 (MQ=255)

                ccGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATCGtt                                                                                   >  2:2003943/1‑100 (MQ=255)

                ccGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGtt                                                                                   >  1:535788/1‑100 (MQ=255)

                ccGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGtt                                                                                   >  1:2213176/1‑100 (MQ=255)

                ccGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGtt                                                                                   >  2:2214947/1‑100 (MQ=255)

                 cGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTc                                                                                  >  1:966236/1‑100 (MQ=255)

                 aagtttgcttcagaatattcgaaatctgttgaactatcattgaactgtagGCCGGATGTGGCGTTTTCGCCGCATCCGGCCTACAGTTCAATGATAGTTc                                                                                  <  1:2452906‑M1/50‑1 (MQ=255)

                    ggggTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAAc                                                                               >  2:2290149/1‑100 (MQ=255)

                      gTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAg                                                                             >  2:2447613/1‑100 (MQ=255)

                       ttCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTTAACAGa                                                                            >  2:172871/1‑100 (MQ=255)

                          tactaATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGAttt                                                                         >  1:2382464/1‑100 (MQ=255)

                           cagaatattcgaaatctgttgaactatcattgaactgtaggccggatgcggcgaaaacgccacatccggcCTACAGTTCAATGATAGTTCAACAGATTTc                                                                        <  1:253503‑M2/30‑1 (MQ=255)

                           actaATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTc                                                                        >  1:2761035/1‑100 (MQ=255)

                           actaATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTc                                                                        >  1:2113768/1‑100 (MQ=255)

                           actaATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTc                                                                        <  1:687867/100‑1 (MQ=255)

                            ctaATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCg                                                                       <  1:1127956/100‑1 (MQ=255)

                              tctACCACGCGTATTTTAACGGTAGAGTAAGTGCGTTGCTGGGTGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGaa                                                                     <  2:2184059/98‑1 (MQ=255)

                              aaTACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGaa                                                                     <  2:779307/100‑1 (MQ=255)

                               aTACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAat                                                                    >  1:2429705/1‑100 (MQ=255)

                                 aCCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAACCGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAatat                                                                  >  2:2721696/1‑100 (MQ=255)

                                 aCCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAatat                                                                  >  2:58823/1‑100 (MQ=255)

                                   cACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTc                                                                <  1:1238758/100‑1 (MQ=255)

                                      gcgTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGa                                                             <  2:1473011/100‑1 (MQ=255)

                                      gcgTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGa                                                             <  2:2320724/100‑1 (MQ=255)

                                        gTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAg                                                           <  1:2258855/100‑1 (MQ=255)

                                         tATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACACCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGc                                                          <  2:1650937/100‑1 (MQ=255)

                                           ttttAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTTAACAGATTTCGAATATTCTGAAg                                                           >  2:846992/1‑97 (MQ=255)

                                           ttttAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCaa                                                        >  1:2544717/1‑100 (MQ=255)

                                            tttAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCaaa                                                       >  1:1984553/1‑100 (MQ=255)

                                             ttAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCaacc                                                      >  1:775629/1‑98 (MQ=255)

                                             gtAACGGTAGAGTAAGTACGTGCCCGCATGCGGCGAAAACGCCACCTCCGGCCTACGGTTCAGGGACAGTTCAACAGATTTCGAATATTATGACGc                                                          >  2:2950660/2‑96 (MQ=25)

                                                  ggTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGaa                                                 >  1:688304/1‑100 (MQ=255)

                                                  ggTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGaa                                                 >  2:1260122/1‑100 (MQ=255)

                                                   gTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAAc                                                <  2:423297/100‑1 (MQ=255)

                                                     agagTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACtt                                              >  1:2142272/1‑100 (MQ=255)

                                                       agtaagtaCGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTat                                            >  1:1033134/1‑100 (MQ=255)

                                                       agtaagtaCGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTat                                            >  1:1030396/1‑100 (MQ=255)

                                                        gtaagtaCGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTatc                                           <  2:730872/100‑1 (MQ=255)

                                                         taagtaCGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTatca                                          <  2:2639529/100‑1 (MQ=255)

                                                           agtaCGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTatcatc                                        >  2:1542617/1‑100 (MQ=255)

                                                           agtaCGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTatcatc                                        <  2:2507234/100‑1 (MQ=255)

                                                             taCGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAg                                      >  1:2151460/1‑100 (MQ=255)

                                                              aCGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAgg                                     <  2:960888/100‑1 (MQ=255)

                                                              aCGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAgg                                     <  1:13860/100‑1 (MQ=255)

                                                               cGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGc                                    >  1:864530/1‑100 (MQ=255)

                                                               cGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGc                                    <  2:2429681/100‑1 (MQ=255)

                                                                gTTGCCGGATGCGGCGAAAACACCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGGAGATTCTGAAGCAAACTTGAACTTATCATCAGGc                                    <  2:2970552/99‑1 (MQ=255)

                                                                 ttGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGa                                  >  2:626896/1‑100 (MQ=255)

                                                                   GCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAg                                <  1:306901‑M1/100‑1 (MQ=255)

                                                                    CCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACATGAACTTATCATCAGGCGaa                                 <  2:3104669‑M1/98‑1 (MQ=255)

                                                                     CGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGc                              <  1:757912‑M1/100‑1 (MQ=255)

                                                                      ggatgtggcgttttcgccgcatccggcCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGcc                             >  2:1374866‑M2/28‑100 (MQ=255)

                                                                      GGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGcc                             <  2:101953‑M1/100‑1 (MQ=255)

                                                                       gatgtggcgttttcgccgcatccggcCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCct                            >  2:2851553‑M2/27‑100 (MQ=255)

                                                                           cggcgAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTctcc                        >  1:747565/1‑100 (MQ=255)

                                                                           cggcgAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTctcc                        <  2:2700106/100‑1 (MQ=255)

                                                                           cggcgAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTctcc                        >  2:2777659/1‑100 (MQ=255)

                                                                           cggcgAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTctcc                        >  1:29410/1‑100 (MQ=255)

                                                                            ggcgAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTctcct                       >  1:2485882/1‑100 (MQ=255)

                                                                            ggcgAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTctcct                       >  1:175143/1‑100 (MQ=255)

                                                                              cgAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTctcctc                      >  1:2627409/1‑99 (MQ=255)

                                                                              cgAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTcg                     <  2:543407/100‑1 (MQ=255)

                                                                                ttttcgccgcatccggcCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTcgcg                   >  1:2115158‑M2/18‑100 (MQ=255)

                                                                                aataCGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCAACAGGCGAAGGCCTCTCCTcgcg                   <  2:1802303/97‑1 (MQ=255)

                                                                                aaaaCGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTcgcg                   <  1:797687/100‑1 (MQ=255)

                                                                                aaaaCGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTcgcg                   <  1:1579909/100‑1 (MQ=255)

                                                                                  aaCGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCgag                 <  1:3099897/100‑1 (MQ=255)

                                                                                  aaCGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCgag                 >  1:923038/1‑100 (MQ=255)

                                                                                  aaCGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCgag                 >  2:2010792/1‑100 (MQ=255)

                                                                                   aCGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCgaga                >  2:59854/1‑100 (MQ=255)

                                                                                    cGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCCTCAGGCGAAGGCCTCTCCTCGCGagag               >  2:376291/1‑100 (MQ=255)

                                                                                    cGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCGagag               <  1:1839583/100‑1 (MQ=255)

                                                                                    cGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCGagag               <  1:570128/100‑1 (MQ=255)

                                                                                      ccACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGc             >  1:3051590/1‑100 (MQ=255)

                                                                                            ccggcCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCtttttt       <  2:2871377‑M2/95‑1 (MQ=255)

                                                                                             cggcCTACAGTTCAATGATAGTTCAACAGATTTCGATTATTCTGAAACAAACTTGAACTTATCATCAGGCGAAAGACTCTCATCGCGAGAGGATTTTTTa      >  1:1422469‑M2/5‑100 (MQ=255)

                                                                                             cggcCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCTTTTTTa      >  1:2012897‑M2/5‑100 (MQ=255)

                                                                                               gcCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCTTTTTTAtt    <  1:1428706‑M2/98‑1 (MQ=255)

                                                                                               gcCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCTTTTTTAtt    >  1:2697266‑M2/3‑100 (MQ=255)

GGCGACGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAAGTACGTTGCCGGATGCGGCGAAAACGCCACATCCGGCCTACAGTTCAATGATAGTTCAACAGATTTCGAATATTCTGAAGCAAACTTGAACTTATCATCAGGCGAAGGCCTCTCCTCGCGAGAGGCTTTTTTATTTG  >  NC_000913/1939032‑1939228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.