New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225998NA (NA)26 (0.210) 13/170 NT NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon

Only 100 of 129 total aligned reads displayed.

TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225896‑225998
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccc‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  NC_000913/226015‑225917
                                                                                                                                                                                                            
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAGCCGGGGGAACTGAAACATCTAAGTAGCCGGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  1:620673/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAGCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:2418401/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:1767337/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:1322554/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:3618332/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:2817182/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         <  2:3465547/100‑1
 gaaACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACAGCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                        <  1:812456/97‑1
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                        <  2:774475/100‑1
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                         >  1:211791/1‑99
  CGACACGCTATCATTAACTGAATCCATAGGTTATTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCACGAGGCAAAGAAATGAACCGAGATT‑CCCC                                                                                                       >  1:3092038/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCTAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  2:1228937/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCTGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       >  1:835044/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       >  2:2002259/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  2:532891/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       >  2:2678382/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  1:1408775/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  2:25464/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       >  1:2917799/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       >  1:1336637/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  2:692348/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                       <  1:2356922/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                        >  1:2525819/1‑99
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAATAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:905869/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:1007073/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:2427385/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:2207840/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  2:1266483/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:2064777/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  1:2232785/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:2745396/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  2:2752501/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  2:3544648/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:1798514/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:307341/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:2424624/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:3313942/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:24484/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      >  1:2845034/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:429794/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:26942/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  2:3524309/100‑1
        ACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCcgttc                                                                                                 <  1:2471039/100‑6
         CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACAGAGATT‑CCCCacgtag                                                                                                 >  1:2757104/1‑93
           ATCATTAACTGAATCCATAGGTTGATGAGTCGAACCGGCGGAACTGAAACATCTACGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                      <  1:3090804/92‑1
                       ATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAAGCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGG                                                                                 <  2:3514299/100‑1
                       ATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGG                                                                                 <  2:2102526/100‑1
                       ATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGG                                                                                 <  2:1313289/100‑1
                         CCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGG                                                                               <  2:3099123/100‑1
                           ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAA                                                                             <  1:70156/100‑1
                            TAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAAT                                                                            <  2:2149421/100‑1
                            TAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAAT                                                                            <  2:1445827/100‑1
                            TAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAAT                                                                            <  1:1572370/100‑1
                             AGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATC                                                                           <  2:1446326/100‑1
                             AGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATC                                                                           <  1:967361/100‑1
                               GTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCG                                                                        <  2:1408837/100‑1
                                TTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCG                                                                        <  2:3177639/100‑1
                                TTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCG                                                                        <  2:2374779/100‑1
                                 TAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGG                                                                       <  2:1666269/100‑1
                                 TAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGT                                                                      <  2:18042/100‑1
                                  AATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGn                                                                      <  2:2676325/100‑2
                                                GGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCT                                                        <  2:2876466/100‑1
                                                                    TACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCTGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTC                                     <  1:330595/100‑1
                                                                                          CCGAGATCCCCCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATT               <  2:1975982/100‑1
                                                                                                  ctctCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG       <  2:1549080/96‑1
                                                                                                  ctcgCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGAAGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG       <  1:3539397/96‑1
                                                                                                    CCCC‑GTTCGCTCGTCGCTACTGGGGGAATCTCGGTTTATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCTGTTCGCCTCATTAACCTATG       <  1:738154/98‑1
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:1187985/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:2852925/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:662299/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:2652626/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:2529220/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:1031232/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:504747/1‑100
                                                                                                    CCCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCACGGTTCGCCTCATTAACCTATGGA     >  2:352995/1‑100
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  1:1128177/1‑100
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  2:2799841/1‑100
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  2:3645623/1‑100
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  2:28575/1‑100
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    <  1:1087941/100‑1
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:3522005/1‑99
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:1131445/1‑99
                                                                                                     CCC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGG      <  1:3052291/98‑1
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGTGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   <  1:3260240/100‑1
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   >  2:331320/1‑100
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   >  2:1751664/1‑100
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   >  1:3368680/1‑100
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   <  2:1080016/100‑1
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTAGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTGCCCCGGTTCGCCTCATTAACCTATGGATT   >  1:2229650/1‑100
                                                                                                      CC‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGATGATTTCTTTTCCTCGGGGTCCTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   >  2:3314394/1‑100
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  >  2:2281550/1‑100
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  2:1644076/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  2:1727782/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  1:1529149/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  1:1011150/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  2:495143/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  1:821037/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  1:3010765/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  2:3416463/100‑1
                                                                                                       C‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    <  1:446163/98‑1
                                                                                                                                                                                                            
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225896‑225998
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccc‑GTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  NC_000913/226015‑225917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.