New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225998NA (NA)26 (0.210) 13/170 NT NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon

Only 100 of 112 total aligned reads displayed.

ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGT  >  NC_000913/225923‑226097
                                                                           |                                                                                                   
aTAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                             >  2:721258/1‑100 (MQ=11)
  aGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGgaggag                                                                           <  1:808935/100‑1 (MQ=32)
   ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          <  1:2452589/100‑1 (MQ=32)
   ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          >  2:339532/1‑100 (MQ=33)
   ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          >  2:1953970/1‑100 (MQ=33)
   ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          >  1:3663803/1‑100 (MQ=32)
    gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                         <  2:3553003/100‑1 (MQ=32)
    gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                         <  2:2517515/100‑1 (MQ=32)
    gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                         >  1:1516003/1‑100 (MQ=33)
     ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                        <  1:984519/100‑1 (MQ=32)
         tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCTAGTAGCGGCGAGCGAACGGGGAGGAGCCCagag                                                                    <  1:2229076/100‑1 (MQ=18)
         tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCagag                                                                    <  2:3612579/100‑1 (MQ=33)
          gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGGGGAGCCCcgag                                                                    >  1:1762369/1‑99 (MQ=12)
          gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACAGGGAGGAGCCCcgag                                                                    >  1:1924092/1‑99 (MQ=12)
           aGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATCCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                  <  1:2759524/100‑1 (MQ=18)
            ngCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                 >  2:271863/2‑100 (MQ=17)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                 >  2:2463483/1‑100 (MQ=33)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                 >  2:3519471/1‑100 (MQ=33)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCAGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                  >  2:3468248/1‑99 (MQ=18)
             gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                <  2:417052/100‑1 (MQ=33)
             gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                <  2:2458961/100‑1 (MQ=33)
             gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                <  1:727865/100‑1 (MQ=33)
             gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                <  2:602889/100‑1 (MQ=33)
             gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                <  2:3485839/100‑1 (MQ=33)
              cGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGa                                                               <  1:1963584/100‑1 (MQ=33)
               gAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGaa                                                              <  2:3243730/100‑1 (MQ=33)
               gAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGaa                                                              <  2:1981615/100‑1 (MQ=33)
                aaCCGGGGGACCTGAACCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCACCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                             <  2:3520776/100‑1 (MQ=255)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                            >  1:2806624/1‑100 (MQ=32)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                            <  1:302631/100‑1 (MQ=33)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                            <  1:2061002/100‑1 (MQ=33)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                            <  2:2218017/100‑1 (MQ=33)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                            >  2:3176543/1‑100 (MQ=33)
                    gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                         >  2:2967397/1‑100 (MQ=33)
                    gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAg                                                          >  1:621866/1‑99 (MQ=33)
                     ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                        >  2:2043353/1‑100 (MQ=33)
                       ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCGCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                      <  1:3437776/100‑1 (MQ=17)
                       ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                      <  2:2853074/100‑1 (MQ=33)
                       ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                      >  1:655083/1‑100 (MQ=32)
                         aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                    <  2:3663832/100‑1 (MQ=33)
                         aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                    <  2:3366701/100‑1 (MQ=33)
                          aCTGATATATTTAAATACTCTGAGTAAAAGTAATCAACCGAGATTCCGTCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGATCTTGAATCAgtgtg                                                      <  1:3057598/97‑1 (MQ=11)
                          aCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgt                                                   <  2:138862/100‑1 (MQ=33)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  >  2:2670298/1‑100 (MQ=33)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  >  2:1776278/1‑100 (MQ=33)
                            tGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                 >  2:2279887/1‑100 (MQ=32)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                >  2:1174003/1‑100 (MQ=33)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                <  1:1206709/100‑1 (MQ=32)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                >  1:3667598/1‑100 (MQ=33)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGGGTGTGtt                                                >  1:577478/1‑100 (MQ=17)
                             gAAACATCTAAGTACCCCGAGGAAAAAAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                >  2:2258734/1‑100 (MQ=18)
                             gAAACATCTAAGTACCCAGAGGAAAAGAAATCAACCGAGATTCACCCAGTAGCGGCGAGCGAACGGGGAAGAGCCCAGAGCCTGACTCAGTGTGTGTGtt                                                >  1:3684788/1‑100 (MQ=11)
                              actcgtgtAAGTACCCCGAGGAAAAGAAATCAATTGACATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTa                                               <  1:1821761/93‑1 (MQ=11)
                                 cATCTAAGTTCCCCGAGGAAAAGAAATCATCCGAGATTCCCCCACTAGCGGCGAGCGAACGGGGACGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                            <  2:2177740/100‑1 (MQ=11)
                                 cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                            <  2:1326483/100‑1 (MQ=33)
                                 cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                            <  2:2358336/100‑1 (MQ=33)
                                   tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                          <  1:3383801/100‑1 (MQ=32)
                                   tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                          <  2:1874089/100‑1 (MQ=33)
                                   tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGAGTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                            <  1:2251328/98‑1 (MQ=17)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                        <  2:2707341/100‑1 (MQ=33)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGACGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                        <  1:2284074/100‑1 (MQ=18)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCAAACGGGGAGGAGCCCAGAGCCTGAATCAGCGCGTGTGTTAGTCGAAg                                        >  1:2794569/1‑100 (MQ=11)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCAAGCGAATGGGGAGGATTCCAGAGCCTGAATCAGTGTGTGTGCTAGTGGAAg                                        >  1:3252514/1‑100 (MQ=11)
                                      aaGTACCCCGAGGAAAAGAAATTAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGc                                       >  1:2141759/1‑100 (MQ=17)
                                      aaGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGc                                       >  1:2685096/1‑100 (MQ=33)
                                      aaGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGc                                       >  1:2603095/1‑100 (MQ=33)
                                          aCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCt                                   <  2:2921161/100‑1 (MQ=32)
                                           ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                  <  1:2785464/100‑1 (MQ=33)
                                           ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                  <  1:615656/100‑1 (MQ=33)
                                            cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                 <  2:2603110/100‑1 (MQ=33)
                                            cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                 >  2:3619078/1‑100 (MQ=33)
                                            cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                 >  2:589189/1‑100 (MQ=33)
                                            cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                 >  1:3628028/1‑100 (MQ=32)
                                             ncGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGa                                >  2:1061699/2‑100 (MQ=17)
                                             ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGGGAACGGGGAGGAGAACCGAGCCTGAATCAGAGTGGGTGATAGTGGAAACGTc                                    >  1:3366682/1‑96 (MQ=11)
                                               gAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGaaa                              <  1:2232696/100‑1 (MQ=33)
                                                aGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAg                             >  2:854191/1‑100 (MQ=32)
                                                 ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                            <  1:1776269/100‑1 (MQ=33)
                                                 ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAGCAGTGTGTGGGTTAGTGGAAGCGTCTGGAAAgg                            >  1:3390988/1‑100 (MQ=16)
                                                   aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg                          >  1:511846/1‑100 (MQ=33)
                                                    aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgc                         <  2:1396957/100‑1 (MQ=33)
                                                    aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgc                         <  2:2778104/100‑1 (MQ=33)
                                                         aaTCTACCCAGATTCCCCCAGTAGCGGCGAGCGATCGGGGAGGAGCGCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcg                        <  1:844794/96‑1 (MQ=11)
                                                           tCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATAc                  <  2:323477/100‑1 (MQ=32)
                                                             aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                >  2:3259275/1‑100 (MQ=33)
                                                              aCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAgg               >  2:2237431/1‑100 (MQ=33)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGTAGGAGCCCACAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg              >  1:3055976/1‑100 (MQ=12)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg              >  2:2265737/1‑100 (MQ=33)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg              <  2:621870/100‑1 (MQ=33)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg              <  2:797313/100‑1 (MQ=33)
                                                                 gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTg            <  1:276495/100‑1 (MQ=32)
                                                                 gagaGTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTg            <  1:2721363/100‑1 (MQ=18)
                                                                   gactCCCCCAGTAGCGGCGAGCGAACGGGGAGGGGCCCAGGGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc          <  1:209786/97‑1 (MQ=255)
                                                                   gaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc          >  1:1320172/1‑100 (MQ=33)
                                                                    aTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACa         <  2:612764/100‑1 (MQ=33)
                                                                        ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGccc     >  2:1022611/1‑100 (MQ=33)
                                                                         cccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGcccc    >  1:659587/1‑100 (MQ=33)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg   <  1:1885430/100‑1 (MQ=32)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg   <  1:3582676/100‑1 (MQ=32)
                                                                           cAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGt  <  2:1357969/100‑1 (MQ=33)
                                                                           |                                                                                                   
ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGT  >  NC_000913/225923‑226097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.