New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3910443 =NA (NA)7 (0.060) 7/168 NT NA noncoding (1/35 nt) REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3910474 = NA (NA)noncoding (32/35 nt) REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 181 total aligned reads displayed.

AAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACC  >  NC_000913/3910344‑3910542
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cgccagcctgccggatagtgtagttgaacaggttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagg                                                                                                     <  1:632101‑M1/1‑1 (MQ=255)
cgccagcctgccggatagtgtagttgaacaggttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaaatccagg                                                                                                     <  2:155510‑M1/1‑1 (MQ=255)
aaaTTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAAAGCGTTTACGAAGTCATTTTGTAATg                                                                                                     >  1:340785/1‑100 (MQ=255)
 gccagcctgccggatagtgtagttgaacaggttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGc                                                                                                    <  1:151211‑M1/2‑1 (MQ=255)
  ccagcctgccggatagtgtagttgaacaggttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGcc                                                                                                   <  2:1943421‑M1/3‑1 (MQ=255)
     aTGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGa                                                                                                <  2:2081586/100‑1 (MQ=255)
       gTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATg                                                                                              >  2:645939/1‑100 (MQ=255)
       gTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATg                                                                                              >  2:370080/1‑100 (MQ=255)
         cGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATgcg                                                                                            >  2:3439384/1‑100 (MQ=255)
          gCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATgcgg                                                                                           <  2:2238507/100‑1 (MQ=255)
          gCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATgcgg                                                                                           <  1:953473/100‑1 (MQ=255)
           cccTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATgcggc                                                                                          >  1:1601303/1‑100 (MQ=255)
           cccTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGGTTACAAAGTCATTTTGTAATGCCGGATgcggc                                                                                          <  2:3506400/100‑1 (MQ=255)
            ccTTTTTACCCGGTGGGTTAAAAGCAGTCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATgcggcg                                                                                         <  1:706106/100‑1 (MQ=255)
              tttttACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTa                                                                                       <  1:2469452/100‑1 (MQ=255)
               ttttACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTaa                                                                                      <  1:207364/100‑1 (MQ=255)
                tttACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCAATAAGTTACTCTTCAATTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTaa                                                                                      <  1:2819011/99‑1 (MQ=255)
                  tACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAac                                                                                   >  1:2573654/1‑100 (MQ=255)
                    cccGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAacac                                                                                 >  2:1511312/1‑100 (MQ=255)
                     ccGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACAcc                                                                                <  1:1066290/100‑1 (MQ=255)
                        gTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTa                                                                             >  2:1894675/1‑100 (MQ=255)
                         tctgTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCGTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTAc                                                                            <  1:2594163/97‑1 (MQ=255)
                            gTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATGTTGTAATGCCGGATGCGGCGTAAAACACCGTAcaga                                                                         >  2:2594178/1‑97 (MQ=255)
                             aggttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCgg                                                                        >  1:1890783‑M1/71‑100 (MQ=255)
                               aaaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAACCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACTGTACCCGGcc                                                                      <  1:2603167/100‑1 (MQ=255)
                                ttcgggctgcgtggaagatcaatatgagagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                     >  2:1600227‑M1/68‑100 (MQ=255)
                                aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                     >  1:2404730/1‑100 (MQ=255)
                                aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                     >  1:3251771/1‑100 (MQ=255)
                                aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCAGATGCGGCGTAAAACACCGTACCCGGcc                                                                      >  1:1381492/1‑99 (MQ=255)
                                 aaGCAGGCTTGGTTGCAGCCATAAGTGACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTg                                                                    <  1:2188920/100‑1 (MQ=255)
                                  cgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGGCGGATGCGGCGTAAAACACCGTACCCGGCCTgg                                                                   >  2:2373762‑M1/66‑100 (MQ=255)
                                  aGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTgg                                                                   <  2:291035/100‑1 (MQ=255)
                                    cgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg                                                                 >  1:2902453‑M1/64‑100 (MQ=255)
                                    cAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg                                                                 <  1:1931638/100‑1 (MQ=255)
                                      ggCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtt                                                               >  2:2478797/1‑100 (MQ=255)
                                        cTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtttt                                                             >  2:763726/1‑100 (MQ=255)
                                         ttGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta                                                            <  1:1016281/100‑1 (MQ=255)
                                         ttGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta                                                            <  2:1335973/100‑1 (MQ=255)
                                          tGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat                                                           >  2:3325378/1‑100 (MQ=255)
                                          tGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat                                                           <  2:521340/100‑1 (MQ=255)
                                           ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                          <  2:3211980/100‑1 (MQ=255)
                                           ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                          <  1:458394/100‑1 (MQ=255)
                                           ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                          >  2:2949903/1‑100 (MQ=255)
                                            gTTGCAGCCATAAGTTACTGTTCAGTTAAACGCGTTTACAAAGACATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtgatta                                                         >  1:532230/1‑100 (MQ=255)
                                            gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                         <  1:3082984/100‑1 (MQ=255)
                                            gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                         >  2:1465726/1‑100 (MQ=255)
                                            gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                         >  2:804889/1‑100 (MQ=255)
                                             ttGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAg                                                        <  1:3032925/100‑1 (MQ=255)
                                              tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATTCCGGCTGCGGCGTAAAACCCCGTACCCGGCCTGGAGTTTTATTTGt                                                       >  1:898838/1‑100 (MQ=255)
                                                cAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTAc                                                     <  2:1120034/100‑1 (MQ=255)
                                                  gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                   <  1:3316738/100‑1 (MQ=255)
                                                  gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                   <  1:3465718/100‑1 (MQ=255)
                                                     aTAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTCCCCGGCCTGGAGTTTTATTAGTACAGCgg                                                <  1:2313223/100‑1 (MQ=255)
                                                     aTAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCgg                                                <  1:3325353/100‑1 (MQ=255)
                                                     aTAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCgg                                                <  1:1346651/100‑1 (MQ=255)
                                                      tAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAAGGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGc                                               <  1:1610405/100‑1 (MQ=255)
                                                         gTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTa                                            >  2:2207988/1‑100 (MQ=255)
                                                           tACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGCGTTTTATTAGTACAGCGGCTTAcc                                          >  1:1083108/1‑100 (MQ=255)
                                                           tACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTAcc                                          <  2:482700/100‑1 (MQ=255)
                                                           tACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTAcc                                          <  2:1714833/100‑1 (MQ=255)
                                                             ctctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGc                                        <  2:2862770/100‑1 (MQ=255)
                                                              tattCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCt                                       >  2:2495363/3‑100 (MQ=255)
                                                               ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCt                                       <  1:2681196/99‑1 (MQ=255)
                                                               ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                      >  2:1673363/1‑100 (MQ=255)
                                                               ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                      >  2:327738/1‑100 (MQ=255)
                                                                 tCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACt                                    >  1:2068766/1‑100 (MQ=255)
                                                                    gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGt                                  <  1:594084/99‑1 (MQ=255)
                                                                      tAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCtt                               >  2:2708741/1‑100 (MQ=255)
                                                                       cttccgatctACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                              <  1:2625021/91‑1 (MQ=255)
                                                                       ataCGCGTTTACAAAGTTATTTTGTAATCCCGGAAGCGGCTTAAAACACCGTACCCGGCCTGGAGTTCTATTAGTACTGCGGCTTACCGCTACTGTCttt                              >  1:157929/3‑100 (MQ=255)
                                                                       aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                              <  1:3695339/100‑1 (MQ=255)
                                                                       aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                              >  1:1432966/1‑100 (MQ=255)
                                                                       aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                              <  1:2949882/100‑1 (MQ=255)
                                                                        aaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTa                             >  2:856294/1‑100 (MQ=255)
                                                                        aaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTa                             >  2:2144533/1‑100 (MQ=255)
                                                                         aCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTaa                            <  2:1075450/100‑1 (MQ=255)
                                                                          cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                           <  2:1379016/100‑1 (MQ=255)
                                                                           gcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAata                          <  2:3290229/100‑1 (MQ=255)
                                                                            cgTTTACAACGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAatat                         <  1:1242036/100‑1 (MQ=255)
                                                                            cgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAatat                         <  2:313818/100‑1 (MQ=255)
                                                                              tttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTg                       >  1:2009058/1‑100 (MQ=255)
                                                                               ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                      <  2:121148/100‑1 (MQ=255)
                                                                                tACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGt                     <  1:954529/100‑1 (MQ=255)
                                                                                 aCAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTagatcggaag                    >  2:2625036/1‑91 (MQ=255)
                                                                                  cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                   >  1:2421397/1‑100 (MQ=255)
                                                                                   aaaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGt                     >  1:2855150/1‑97 (MQ=255)
                                                                                   aaaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCtt                  >  2:1776906/1‑100 (MQ=255)
                                                                                      gTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTcc                >  2:3379619/1‑99 (MQ=255)
                                                                                       tCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCAc              <  1:775981/100‑1 (MQ=255)
                                                                                         aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGc            <  2:2573669/100‑1 (MQ=255)
                                                                                         aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGc            >  2:1932632/1‑100 (MQ=255)
                                                                                         aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGATCTTCCACGc            >  2:3309499/1‑100 (MQ=255)
                                                                                          ttttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCa           >  2:904722/1‑100 (MQ=255)
                                                                                          ttttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCa           <  2:954143/100‑1 (MQ=255)
                                                                                            ttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgc         <  1:2184416/100‑1 (MQ=255)
                                                                                            ttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgc         <  2:1614480/100‑1 (MQ=255)
                                                                                               tAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg      >  2:3676244/1‑100 (MQ=255)
                                                                                               tAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg      >  2:827084/1‑100 (MQ=255)
                                                                                               tAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg      >  2:1281484/1‑100 (MQ=255)
                                                                                                aaTGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGa     >  1:1410082/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AAATTATGTCGCCCTTTTTACCCGGTGGGTTAAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACC  >  NC_000913/3910344‑3910542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.