New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3910443 =NA (NA)7 (0.060) 7/168 NT NA noncoding (1/35 nt) REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3910474 = NA (NA)noncoding (32/35 nt) REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 197 total aligned reads displayed.

AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910375‑3910573
                                                                                                   |                                                                                                   
gttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                     >  2:2619689‑M1/69‑100 (MQ=255)
aaaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAACCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACTGTACCCGGcc                                                                                                     <  1:2603167/100‑1 (MQ=255)
 ttcgggctgcgtggaagatcaatatgagagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    >  2:1600227‑M1/68‑100 (MQ=255)
 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    <  2:2131770/100‑1 (MQ=255)
 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                    >  1:3251771/1‑100 (MQ=255)
 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCAGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                     >  1:1381492/1‑99 (MQ=255)
  tcgcgctgcgtggaagatcaatattaaagccagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCTg                                                                                                   >  1:1892324‑M1/67‑100 (MQ=255)
     cgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg                                                                                                >  1:2902453‑M1/64‑100 (MQ=255)
     cAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg                                                                                                <  1:1931638/100‑1 (MQ=255)
        gCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGttt                                                                                             <  2:3356888/100‑1 (MQ=255)
         cTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtttt                                                                                            <  2:253667/100‑1 (MQ=255)
         cTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtttt                                                                                            >  2:1381923/1‑100 (MQ=255)
          ttGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta                                                                                           <  1:1016281/100‑1 (MQ=255)
          ttGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta                                                                                           <  2:60026/100‑1 (MQ=255)
           tGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat                                                                                          <  2:521340/100‑1 (MQ=255)
            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  2:3211980/100‑1 (MQ=255)
            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  1:704484/100‑1 (MQ=255)
            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         >  2:2949903/1‑100 (MQ=255)
             gTTGCAGCCATAAGTTACTGTTCAGTTAAACGCGTTTACAAAGACATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtgatta                                                                                        >  1:532230/1‑100 (MQ=255)
             gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        <  1:3082984/100‑1 (MQ=255)
             gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        >  2:1465726/1‑100 (MQ=255)
             gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        >  2:804889/1‑100 (MQ=255)
              ttGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAg                                                                                       <  1:3032925/100‑1 (MQ=255)
               tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATTCCGGCTGCGGCGTAAAACCCCGTACCCGGCCTGGAGTTTTATTTGt                                                                                      >  1:898838/1‑100 (MQ=255)
                 cAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTAc                                                                                    <  2:1120034/100‑1 (MQ=255)
                  aGCCATAAGTTACTCTTCAGTTAAACGCGTTTACACAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTCCCCGGCCTGGAGTTTTATTAGTaaa                                                                                   >  2:3461949/1‑98 (MQ=255)
                   gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                                                  <  1:3316738/100‑1 (MQ=255)
                   gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                                                  <  1:3465718/100‑1 (MQ=255)
                    ccATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGc                                                                                 >  1:2924345/1‑100 (MQ=255)
                     aatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCg                                                                                >  2:1815855‑M1/48‑100 (MQ=255)
                      aTAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTCCCCGGCCTGGAGTTTTATTAGTACAGCgg                                                                               <  1:2313223/100‑1 (MQ=255)
                      aTAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCgg                                                                               <  1:3325353/100‑1 (MQ=255)
                       tAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAAGGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGc                                                                              <  1:1610405/100‑1 (MQ=255)
                         aGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCtt                                                                            >  2:3141219/1‑100 (MQ=255)
                            tACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGCGTTTTATTAGTACAGCGGCTTAcc                                                                         >  1:1083108/1‑100 (MQ=255)
                            tACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTAcc                                                                         <  2:1714833/100‑1 (MQ=255)
                             aCTCTTCAGTTAAGCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCg                                                                        <  2:137633/100‑1 (MQ=255)
                              ctctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGc                                                                       >  2:2479285/1‑100 (MQ=255)
                               tctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCt                                                                      <  2:2279001/100‑1 (MQ=255)
                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCt                                                                      <  1:2681196/99‑1 (MQ=255)
                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  2:327738/1‑100 (MQ=255)
                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  2:2679176/1‑100 (MQ=255)
                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  2:1673363/1‑100 (MQ=255)
                                  tCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACt                                                                   >  1:2068766/1‑100 (MQ=255)
                                   cAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTg                                                                  >  2:2738016/1‑100 (MQ=255)
                                     gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTc                                                                >  2:2873382/1‑100 (MQ=255)
                                       tAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCtt                                                              >  1:92187/1‑100 (MQ=255)
                                        cttccgatctACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                             <  1:2625021/91‑1 (MQ=255)
                                        aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                             <  1:3695339/100‑1 (MQ=255)
                                        aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                             >  1:1432966/1‑100 (MQ=255)
                                         aaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTa                                                            >  1:2187933/1‑100 (MQ=255)
                                         aaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTa                                                            >  2:2144533/1‑100 (MQ=255)
                                         aaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTa                                                            >  2:856294/1‑100 (MQ=255)
                                         aaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTa                                                            <  1:433685/100‑1 (MQ=255)
                                          aCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTaa                                                           <  2:1075450/100‑1 (MQ=255)
                                            gcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAata                                                         <  2:3290229/100‑1 (MQ=255)
                                             cgTTTACAACGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAatat                                                        <  1:1242036/100‑1 (MQ=255)
                                             cgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAatat                                                        <  2:313818/100‑1 (MQ=255)
                                             cgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCCGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAatat                                                        >  1:2418354/1‑100 (MQ=255)
                                               tttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTg                                                      >  1:2009058/1‑100 (MQ=255)
                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  2:121148/100‑1 (MQ=255)
                                                ttACAAAGTCATATTGTAATGCCGGATGAGGCGTAAAACACCGTACCCGGCCTGGAGCTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     >  1:155510/1‑100 (MQ=255)
                                                  aCAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTagatcggaag                                                   >  2:2625036/1‑91 (MQ=255)
                                                    aaaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGt                                                    >  1:2855150/1‑97 (MQ=255)
                                                    aaaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCtt                                                 >  1:1419454/1‑100 (MQ=255)
                                                    aaaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCtt                                                 >  2:1776906/1‑100 (MQ=255)
                                                     aaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTc                                                <  1:783762/100‑1 (MQ=255)
                                                     aaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCGTTAATATTGGTCtt                                                 >  2:668389/1‑99 (MQ=255)
                                                       gTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCa                                              >  1:2512796/1‑100 (MQ=255)
                                                          aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGc                                           <  2:2573669/100‑1 (MQ=255)
                                                          aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGc                                           >  2:1932632/1‑100 (MQ=255)
                                                          aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGATCTTCCACGc                                           >  2:3309499/1‑100 (MQ=255)
                                                           ttttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCa                                          >  2:904722/1‑100 (MQ=255)
                                                           ttttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCa                                          <  2:954143/100‑1 (MQ=255)
                                                             ttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgc                                        <  2:1614480/100‑1 (MQ=255)
                                                                tAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg                                     >  2:827084/1‑100 (MQ=255)
                                                                tAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg                                     >  2:1281484/1‑100 (MQ=255)
                                                                ccaggccgggtacggtgttttacgccgcatccgccCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg                                     >  2:2373762‑M2/36‑100 (MQ=255)
                                                                 aaTGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGa                                    >  1:1410082/1‑100 (MQ=255)
                                                                  aTGCCGGATGCGGCGTAAAGCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGaa                                   <  1:978522/100‑1 (MQ=255)
                                                                    GCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 <  2:1235606‑M1/100‑1 (MQ=255)
                                                                    GCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  2:38292‑M1/1‑100 (MQ=255)
                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           <  1:1317209/100‑1 (MQ=255)
                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           <  1:1579699/100‑1 (MQ=255)
                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                           <  1:25679/100‑1 (MQ=255)
                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                         <  2:2197880/100‑1 (MQ=255)
                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                         >  2:88350/1‑100 (MQ=255)
                                                                            cggcgTAAAACACCGGACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                         <  1:2190073/100‑1 (MQ=255)
                                                                             ggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACt                        <  1:3231738/100‑1 (MQ=255)
                                                                                 tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                    <  2:3678816/100‑1 (MQ=255)
                                                                                   aaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTa                  >  1:1505095/1‑100 (MQ=255)
                                                                                        ccGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCgg             >  2:506129/1‑100 (MQ=255)
                                                                                        ccGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCgg             <  2:1432972/100‑1 (MQ=255)
                                                                                           tACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAg          <  1:507428/100‑1 (MQ=255)
                                                                                           tACCCGGCCTAGAGTTTTATTAGAACAGCGGACTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGc            <  1:10494/98‑1 (MQ=255)
                                                                                            aCCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAg          >  1:1677767/1‑99 (MQ=255)
                                                                                                ggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTgg     <  2:1943421‑M2/97‑1 (MQ=255)
                                                                                                ggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTgg     <  1:116542‑M2/97‑1 (MQ=255)
                                                                                                  cCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCg   <  1:632101‑M2/99‑1 (MQ=255)
                                                                                                   cTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGt  >  2:1485578/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910375‑3910573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.