New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4415962 =NA (NA)5 (0.040) 4/166 NT NA noncoding (5/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4415992 = NA (NA)intergenic (+92/+25) aidB/yjfN DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase/DUF1471 family periplasmic protein

Only 100 of 231 total aligned reads displayed.

ATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTG  >  NC_000913/4415863‑4416061
                                                                                                   |                                                                                                   
ggtaccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatg                                                                                                     <  1:3369993‑M1/1‑1 (MQ=255)
ggtaccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatg                                                                                                     >  2:1082738‑M1/100‑100 (MQ=255)
   accgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCg                                                                                                  <  1:1238420‑M1/4‑1 (MQ=255)
   accgcattattaccatgtacgaagaccagcagcctgataactagcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCg                                                                                                  >  1:2606879‑M1/97‑100 (MQ=255)
    ccgcattattaccatgtgcgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCgg                                                                                                 <  2:1845606‑M1/5‑1 (MQ=255)
    ccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCgg                                                                                                 >  1:2219508‑M1/96‑100 (MQ=255)
      gcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgataatgtatgcatgagtgtcatctacagcaaatgaacaatGc                                                                                                    <  1:3503339‑M1/2‑1 (MQ=255)
        ctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACaa                                                                                             >  2:1688572/1‑100 (MQ=255)
          gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                           >  2:3589975/1‑100 (MQ=255)
          gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCCATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACaacg                                                                                           <  2:2507324/100‑3 (MQ=255)
           cGGGCGACGGGGGGAGTGTGTGTGTAAGAGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                          <  1:1827767/100‑1 (MQ=255)
             ggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcgc                                                                                        <  1:1517505/100‑1 (MQ=255)
             ggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcgc                                                                                        >  2:2081078/1‑100 (MQ=255)
               cGACGGGCGGAGTGTGTGTGTAAGCGTATACGAGTGATGCGGGGCGGGTTTCGATTAACTAAATGAAATATGGGCAAATTGTAGGCCGGGCAAGGCGCTc                                                                                      >  1:1377516/1‑100 (MQ=255)
                   ggggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgcg                                                                                   <  1:763698/99‑1 (MQ=255)
                     ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                                >  2:577630/1‑100 (MQ=255)
                     ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                                >  2:76186/1‑100 (MQ=255)
                     ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                                >  2:177477/1‑100 (MQ=255)
                       ggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCa                                                                              <  2:2311739/100‑1 (MQ=255)
                             tgtttgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGC                                                                        >  1:3314396‑M2/1‑100 (MQ=255)
                              gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCa                                                                       >  1:845233/1‑100 (MQ=255)
                                gtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                     >  1:3022880/1‑100 (MQ=255)
                                 tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    <  2:1517877/100‑1 (MQ=255)
                                 agcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    >  2:2162132‑M1/67‑100 (MQ=255)
                                  gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGCAACTTGTCGGCCTGCCAAGGAGCTAGCGCCGCATCCGGGATTg                                                                    >  1:1393043/1‑99 (MQ=255)
                                    ctgataactggcgcgtacaggcgatactgtaggcatgagtgtcatctacagcaaatgaacgatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                  >  1:648080‑M1/64‑99 (MQ=255)
                                     aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                >  2:2298122/1‑100 (MQ=255)
                                     aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                >  1:3385341/1‑100 (MQ=255)
                                     aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                >  2:3664380/1‑100 (MQ=255)
                                     aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                <  1:134109/100‑1 (MQ=255)
                                      gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAATTGAATTATGTGAAAATTGTCGGCCGGACAAGGCGCTCGCGCCGCATCCCGCATTGTTCAt                                                               >  1:3445725/1‑100 (MQ=39)
                                        gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAGTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                             >  1:1972634/1‑100 (MQ=255)
                                        gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                             <  1:2321245/100‑1 (MQ=255)
                                          ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                           <  2:1971861/100‑1 (MQ=255)
                                           taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGGCGAACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                           >  1:2602165/1‑99 (MQ=255)
                                           taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                          >  2:3193399/1‑100 (MQ=255)
                                            aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                         <  2:3117212/100‑1 (MQ=255)
                                            aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                         <  2:1713548/100‑1 (MQ=255)
                                             cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcaca                                                          <  1:2821206‑M2/98‑15 (MQ=255)
                                                cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACGAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                     >  2:891449/1‑100 (MQ=255)
                                                 tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                    <  2:2535277/100‑1 (MQ=255)
                                                 tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                    >  1:989526/1‑100 (MQ=255)
                                                  gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTgagctcg                                                   >  2:3439655/1‑94 (MQ=255)
                                                  gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                   <  2:3385367/100‑1 (MQ=255)
                                                    tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                 <  2:2463164/100‑1 (MQ=255)
                                                    tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                 <  2:1266242/100‑1 (MQ=255)
                                                    tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                 <  2:845238/100‑1 (MQ=255)
                                                    tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCACATCCGGCATTGTTCATTTGCTGTAGATGac                                                 <  1:1034664/100‑1 (MQ=255)
                                                       gACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACt                                              >  2:449805/1‑100 (MQ=255)
                                                        aCGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTc                                             >  1:2837583/1‑100 (MQ=255)
                                                         cGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCa                                            <  1:3569613/100‑1 (MQ=255)
                                                         cGCTGGCTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGCCACTCa                                            >  1:2101976/1‑100 (MQ=255)
                                                          gCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCAt                                           <  2:103013/100‑1 (MQ=255)
                                                           cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                          <  2:3602660/100‑1 (MQ=255)
                                                            tGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                         <  1:159289/100‑1 (MQ=255)
                                                             ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                        >  2:1759112/1‑100 (MQ=255)
                                                             ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                        <  2:1387703/100‑1 (MQ=255)
                                                             ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAAGCGCTAGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                         >  1:3136452/1‑99 (MQ=255)
                                                              gTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCAt                                       >  1:2072343/1‑100 (MQ=255)
                                                               tttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATa                                      >  1:1099505/1‑100 (MQ=255)
                                                                  tgATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   <  1:55853/99‑1 (MQ=255)
                                                                  cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTTGATGACACTCATGCATACan                                   <  1:2265365/100‑2 (MQ=255)
                                                                  cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   <  1:3664351/100‑1 (MQ=255)
                                                                  cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   <  2:1327392/100‑1 (MQ=255)
                                                                  cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTAATTTGCTGTAGATGACACTCATGCATACAg                                   >  1:62054/1‑100 (MQ=255)
                                                                  cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATAGTTCATTTGCTGTAGATGACACTCATGCATActg                                   >  1:678605/1‑98 (MQ=255)
                                                                  cGATTAACTAAAGGAAATATGTGAAAATTGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGTATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   <  1:1003136/100‑1 (MQ=255)
                                                                   gATTAACTAAATGAAATATGTGAATATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACTCTCATGCATACAGt                                  <  1:1751557/100‑1 (MQ=255)
                                                                   gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAga                                  >  2:55853/1‑99 (MQ=255)
                                                                   gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                  >  1:3419137/1‑100 (MQ=255)
                                                                   gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                  >  2:1238426/1‑100 (MQ=255)
                                                                       aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTTGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATc                               >  2:316776/1‑99 (MQ=255)
                                                                        aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                              >  1:2201424/1‑99 (MQ=255)
                                                                         cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                            <  1:1631366/100‑1 (MQ=255)
                                                                         cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                            <  2:224049/100‑1 (MQ=255)
                                                                         cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                            >  2:2721076/1‑100 (MQ=255)
                                                                          tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                           <  1:3308682/100‑1 (MQ=255)
                                                                          tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATAGctt                           >  1:2238739/1‑98 (MQ=255)
                                                                           aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                          <  2:3352160/100‑1 (MQ=255)
                                                                              tGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAc                       <  1:474858/100‑1 (MQ=255)
                                                                                 aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                    <  2:1130234/100‑1 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                >  2:263442/1‑100 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                <  1:2505699/100‑1 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                >  2:2357147/1‑100 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                <  1:1294029/100‑1 (MQ=255)
                                                                                      gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAga               >  2:129181/1‑99 (MQ=255)
                                                                                      gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt               >  1:291250/1‑100 (MQ=255)
                                                                                       tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTTTAGATGACACTCTTGCATATAGTATCGTCTGTACGCGCTAGt               >  1:1227329/1‑99 (MQ=37)
                                                                                         aaaaTTGTAGGCCCGACAAGGCGCTGGCGCCGCATCCGGCATATTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             <  1:2367948/99‑1 (MQ=39)
                                                                                          aaaTAGTACGCCGGGCAAGGTGCTCTCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGAGACTCATGCATACAGTATCGCCTGTACGCGCCAg                <  1:1880379/95‑1 (MQ=255)
                                                                                           aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa          <  1:2336558/100‑1 (MQ=255)
                                                                                            aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc           <  1:2538417/98‑1 (MQ=255)
                                                                                             ttgtatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg         >  1:2800043‑M1/7‑99 (MQ=255)
                                                                                               gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttaca      <  1:1085360‑M2/100‑67 (MQ=255)
                                                                                                tAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacac     <  2:1446793‑M2/100‑68 (MQ=255)
                                                                                                 aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacaca    <  1:3281462‑M2/100‑69 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacac   <  1:426467‑M2/100‑70 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  1:3509520/1‑100 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  2:2958731/1‑100 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTCCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   <  2:2602180/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTG  >  NC_000913/4415863‑4416061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.