New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4415962 =NA (NA)5 (0.040) 4/166 NT NA noncoding (5/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4415992 = NA (NA)intergenic (+92/+25) aidB/yjfN DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase/DUF1471 family periplasmic protein

Only 100 of 224 total aligned reads displayed.

GTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTACCA  >  NC_000913/4415893‑4416091
                                                                                                   |                                                                                                   
  gtgtAAGTGTAGACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTGGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                                                   >  1:1946729/1‑100 (MQ=255)
    gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                                                 >  1:2192203/1‑100 (MQ=255)
      ctgataactggcgcgtacaggcgatactgtaggcatgagtgtcatctacagcaaatgaacgatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                                                >  1:648080‑M1/64‑99 (MQ=255)
      aaGCGTATACGACTGATGCGACGCTGTTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                                               <  1:2818132/100‑1 (MQ=255)
       aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                                              >  2:3664380/1‑100 (MQ=255)
       aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                                              >  1:3385341/1‑100 (MQ=255)
        gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAATTGAATTATGTGAAAATTGTCGGCCGGACAAGGCGCTCGCGCCGCATCCCGCATTGTTCAt                                                                                             >  1:3445725/1‑100 (MQ=39)
           tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTg                                                                                          <  2:3306558/100‑1 (MQ=255)
             taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGGCGAACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                                                         >  1:2602165/1‑99 (MQ=255)
             taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                        <  2:1788333/100‑1 (MQ=255)
             taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                        <  1:2415794/100‑1 (MQ=255)
             taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                        <  1:2298014/100‑1 (MQ=255)
              aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                                                       <  2:3117212/100‑1 (MQ=255)
              aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                                                       <  2:3591869/100‑1 (MQ=255)
                gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                                                     <  2:1931644/100‑1 (MQ=255)
                 aCTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg                                                                                    <  1:1234357/100‑1 (MQ=255)
                  cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACGAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                                                   >  2:891449/1‑100 (MQ=255)
                  cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                                                   <  2:1478856/100‑1 (MQ=255)
                   tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                                                  >  1:989526/1‑100 (MQ=255)
                   tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                                                  <  1:1716137/100‑1 (MQ=255)
                   tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                                                  <  2:2535277/100‑1 (MQ=255)
                    gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTgagctcg                                                                                 >  2:3439655/1‑94 (MQ=255)
                    gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAgcta                                                                                 >  2:1716144/1‑97 (MQ=255)
                     aTGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTATGCCTGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                                                 <  1:672565/99‑1 (MQ=255)
                      tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                                               <  2:2463164/100‑1 (MQ=255)
                      tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                                               <  2:1266242/100‑1 (MQ=255)
                      tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCACATCCGGCATTGTTCATTTGCTGTAGATGac                                                                               <  1:1034664/100‑1 (MQ=255)
                      tGCGACGCTGGTTTCGATTAACCAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                                               <  1:824650/100‑1 (MQ=255)
                          aCGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTc                                                                           >  1:2837583/1‑100 (MQ=255)
                            gCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCAt                                                                         <  2:103013/100‑1 (MQ=255)
                              tGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                                                       <  1:159289/100‑1 (MQ=255)
                               ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                                                      <  2:1387703/100‑1 (MQ=255)
                               ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAAGCGCTAGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                                                       >  1:3136452/1‑99 (MQ=255)
                                gTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCAt                                                                     >  1:2072343/1‑100 (MQ=255)
                                   tCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACa                                                                  <  1:176351/100‑1 (MQ=255)
                                    tgATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                                                 <  1:55853/99‑1 (MQ=255)
                                    cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTTGATGACACTCATGCATACan                                                                 <  1:2265365/100‑2 (MQ=255)
                                    cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                                                 <  2:1327392/100‑1 (MQ=255)
                                    cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                                                 <  1:3664351/100‑1 (MQ=255)
                                    cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTAATTTGCTGTAGATGACACTCATGCATACAg                                                                 >  1:62054/1‑100 (MQ=255)
                                    cGATTAACTAAAGGAAATATGTGAAAATTGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGTATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                                                 <  1:1003136/100‑1 (MQ=255)
                                     gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAga                                                                >  2:55853/1‑99 (MQ=255)
                                     gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                                                >  2:1238426/1‑100 (MQ=255)
                                        tAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATc                                                             <  2:868239/100‑1 (MQ=255)
                                          aCTAAATGAAATATCTGAAAATTGTACGCCCGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCCTTTGCTGTAGATGACACCCATGCCTAAAGTATCGc                                                           >  1:2201454/1‑100 (MQ=37)
                                           cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                          <  2:2547062/100‑1 (MQ=255)
                                           cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                          <  1:1631366/100‑1 (MQ=255)
                                           cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                          <  2:224049/100‑1 (MQ=255)
                                            tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATAGctt                                                         >  1:2238739/1‑98 (MQ=255)
                                             atatcatatatTTGAAAATTGTACGCCGGACAAGGCGCTCGCGCCGCATCCGGCGTTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                                                        <  2:2131362/93‑1 (MQ=38)
                                             aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                                                        <  2:3352160/100‑1 (MQ=255)
                                               aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                                                      >  2:2300133/1‑100 (MQ=255)
                                                tGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAc                                                     <  1:474858/100‑1 (MQ=255)
                                                   aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                                                  <  2:1130234/100‑1 (MQ=255)
                                                     tatGTGAAAATTGGAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGcc                                                <  1:1122018/100‑1 (MQ=255)
                                                       tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                              <  1:272692/100‑1 (MQ=255)
                                                       tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                              <  1:1294029/100‑1 (MQ=255)
                                                       tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                              <  1:2505699/100‑1 (MQ=255)
                                                       tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                              >  2:263442/1‑100 (MQ=255)
                                                        gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAga                                             >  2:129181/1‑99 (MQ=255)
                                                        gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt                                             >  1:291250/1‑100 (MQ=255)
                                                         tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt                                            >  1:199160/1‑100 (MQ=255)
                                                            aaaTAGTACGCCGGGCAAGGTGCTCTCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGAGACTCATGCATACAGTATCGCCTGTACGCGCCAg                                              <  1:1880379/95‑1 (MQ=255)
                                                             aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa                                        <  1:2336558/100‑1 (MQ=255)
                                                              aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc                                         <  1:2538417/98‑1 (MQ=255)
                                                               ttgtatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg                                       >  1:2800043‑M1/7‑99 (MQ=255)
                                                                tGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgc                                     <  2:495372/100‑1 (MQ=255)
                                                                tGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgc                                     >  1:3423920/1‑100 (MQ=255)
                                                                 caatgccggatgcggcgcgagcgccttgtccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgct                                    >  2:2162132‑M2/35‑100 (MQ=255)
                                                                   atgcaggatgcggcgcgagcgccttgtccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGATATCAGgctg                                   >  1:1226539‑M2/33‑99 (MQ=255)
                                                                    ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                                 >  1:3509520/1‑100 (MQ=255)
                                                                    ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                                 <  1:1363760/100‑1 (MQ=255)
                                                                     GCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGctgctg                                <  2:817296‑M1/100‑1 (MQ=255)
                                                                      ccggatgcggcgcgagcgccttgtccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTgg                               >  1:3308345‑M2/30‑100 (MQ=255)
                                                                      CCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTgg                               <  2:2384319‑M1/100‑1 (MQ=255)
                                                                      CCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTgg                               <  2:3361789‑M1/100‑1 (MQ=255)
                                                                      CCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTgg                               >  2:379273‑M1/1‑100 (MQ=255)
                                                                      CCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTgg                               <  2:3174725‑M1/100‑1 (MQ=255)
                                                                      CCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTgg                               >  2:39647‑M1/1‑100 (MQ=255)
                                                                       CGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGt                              >  2:2900867‑M1/1‑100 (MQ=255)
                                                                           cAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTc                          >  2:2752630/1‑100 (MQ=255)
                                                                           cAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTc                          <  2:711882/100‑1 (MQ=255)
                                                                              ggCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTCTCGCCTGTACGCGCCAGTTATCATGCTGCTGGTCTTCGTa                       >  1:1405346/1‑100 (MQ=255)
                                                                              ggCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTa                       <  1:3539166/100‑1 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTAc                      >  2:3196945/1‑99 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACa                     >  2:2348834/1‑100 (MQ=255)
                                                                                  cTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATg                   >  1:743162/1‑100 (MQ=255)
                                                                                   tCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATgg                  <  2:1858980/100‑1 (MQ=255)
                                                                                      cgccgcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaa               <  2:2699933/100‑1 (MQ=255)
                                                                                        ccgcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaata             <  2:3509547/100‑1 (MQ=255)
                                                                                          gcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTaataat           >  2:2269922/1‑100 (MQ=255)
                                                                                          gcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTaataat           >  1:1494393/1‑100 (MQ=255)
                                                                                             tccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCg        >  1:131692‑M2/7‑100 (MQ=255)
                                                                                              ccggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCgg       <  2:1567890‑M2/95‑1 (MQ=255)
                                                                                               cggcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCTAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGt      >  1:2606879‑M2/5‑100 (MQ=255)
                                                                                                 gcATTGTTCATTTGCTGTAGATGACACTCATGCATACATTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGc         <  1:3503339‑M2/93‑1 (MQ=255)
                                                                                                 gcATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTAc    <  1:3196921‑M2/98‑1 (MQ=255)
                                                                                                  cATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTAcc   <  1:3369993‑M2/99‑1 (MQ=255)
                                                                                                   aTTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTACCa  <  2:2998684/100‑1 (MQ=255)
                                                                                                   aTTGTTCACTTGCTGTAGATGACACTCATGCATACAGTATCGACTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTACCa  <  1:1278272/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTACCA  >  NC_000913/4415893‑4416091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.